RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 BRWD3Q6RI45 1802 aa16.6■□□□□ 0.25
AC009065.7-201ENST00000561544 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
AC009065.7-201ENST00000561544 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
AC009065.7-201ENST00000561544 RGS12O14924 1447 aa16.59■□□□□ 0.25
AC009065.7-201ENST00000561544 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
AC009065.7-201ENST00000561544 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
AC009065.7-201ENST00000561544 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
AC009065.7-201ENST00000561544 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
AC009065.7-201ENST00000561544 NSD2O96028 1365 aa16.58■□□□□ 0.24
AC009065.7-201ENST00000561544 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
AC009065.7-201ENST00000561544 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
AC009065.7-201ENST00000561544 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
AC009065.7-201ENST00000561544 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
AC009065.7-201ENST00000561544 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
AC009065.7-201ENST00000561544 VPS72Q15906 364 aa16.56■□□□□ 0.24
AC009065.7-201ENST00000561544 RXRBP28702 533 aa16.55■□□□□ 0.24
AC009065.7-201ENST00000561544 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
AC009065.7-201ENST00000561544 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
AC009065.7-201ENST00000561544 CRB1P82279 1406 aa16.53■□□□□ 0.24
AC009065.7-201ENST00000561544 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
AC009065.7-201ENST00000561544 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
AC009065.7-201ENST00000561544 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
AC009065.7-201ENST00000561544 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
AC009065.7-201ENST00000561544 EVA1CP58658 441 aa16.52■□□□□ 0.24
AC009065.7-201ENST00000561544 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.24
AC009065.7-201ENST00000561544 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
AC009065.7-201ENST00000561544 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.24
AC009065.7-201ENST00000561544 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
AC009065.7-201ENST00000561544 ERBB3P21860 1342 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 WDR17Q8IZU2 1322 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 HOXC9P31274 260 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 AMPHP49418 695 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 FLT4P35916 1363 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
AC009065.7-201ENST00000561544 IP6K1Q92551 441 aa16.5■□□□□ 0.23
AC009065.7-201ENST00000561544 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
AC009065.7-201ENST00000561544 FAM98CQ17RN3 349 aaKnown RBP16.49■□□□□ 0.23
AC009065.7-201ENST00000561544 ANKRD24Q8TF21 1146 aa16.49■□□□□ 0.23
AC009065.7-201ENST00000561544 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
AC009065.7-201ENST00000561544 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
AC009065.7-201ENST00000561544 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
AC009065.7-201ENST00000561544 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
AC009065.7-201ENST00000561544 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
AC009065.7-201ENST00000561544 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
AC009065.7-201ENST00000561544 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
AC009065.7-201ENST00000561544 INSRP06213 1382 aa16.47■□□□□ 0.23
AC009065.7-201ENST00000561544 HSP90AB2PQ58FF8 381 aa16.46■□□□□ 0.23
AC009065.7-201ENST00000561544 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 A0A0G2JS52 829 aa16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 MYT1Q01538 1121 aa16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
AC009065.7-201ENST00000561544 SEPT12Q8IYM1 358 aa16.44■□□□□ 0.22
AC009065.7-201ENST00000561544 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
AC009065.7-201ENST00000561544 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
AC009065.7-201ENST00000561544 CARD10Q9BWT7 1032 aa16.43■□□□□ 0.22
AC009065.7-201ENST00000561544 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
AC009065.7-201ENST00000561544 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
AC009065.7-201ENST00000561544 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
AC009065.7-201ENST00000561544 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
AC009065.7-201ENST00000561544 MEGF6O75095 1541 aa16.4■□□□□ 0.22
AC009065.7-201ENST00000561544 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
AC009065.7-201ENST00000561544 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
AC009065.7-201ENST00000561544 THRAP3Q9Y2W1 955 aaKnown RBP16.4■□□□□ 0.22
AC009065.7-201ENST00000561544 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
AC009065.7-201ENST00000561544 EP400Q96L91 3159 aa16.39■□□□□ 0.21
AC009065.7-201ENST00000561544 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
AC009065.7-201ENST00000561544 TNS2Q63HR2 1409 aa16.38■□□□□ 0.21
AC009065.7-201ENST00000561544 MTHFSP49914 203 aa16.38■□□□□ 0.21
AC009065.7-201ENST00000561544 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
AC009065.7-201ENST00000561544 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
AC009065.7-201ENST00000561544 SBF2Q86WG5 1849 aa16.38■□□□□ 0.21
AC009065.7-201ENST00000561544 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
AC009065.7-201ENST00000561544 FAM182BQ5T319 152 aa16.36■□□□□ 0.21
AC009065.7-201ENST00000561544 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
AC009065.7-201ENST00000561544 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
AC009065.7-201ENST00000561544 OVOS2A0A0G2JMS6 1433 aa16.35■□□□□ 0.21
AC009065.7-201ENST00000561544 IL2RBP14784 551 aa16.34■□□□□ 0.21
AC009065.7-201ENST00000561544 EYA1Q99502 592 aa16.34■□□□□ 0.21
AC009065.7-201ENST00000561544 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.21
AC009065.7-201ENST00000561544 IGSF1Q8N6C5 1336 aa16.33■□□□□ 0.2
AC009065.7-201ENST00000561544 SOCS7O14512 581 aa16.32■□□□□ 0.2
AC009065.7-201ENST00000561544 DDB1Q16531 1140 aa16.32■□□□□ 0.2
AC009065.7-201ENST00000561544 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
AC009065.7-201ENST00000561544 IL13P35225 146 aa16.31■□□□□ 0.2
AC009065.7-201ENST00000561544 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
AC009065.7-201ENST00000561544 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
AC009065.7-201ENST00000561544 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
AC009065.7-201ENST00000561544 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
AC009065.7-201ENST00000561544 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
AC009065.7-201ENST00000561544 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
AC009065.7-201ENST00000561544 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms