RNA–Protein interactions for RNA: ENST00000560487.1

AC106738.1-201, humanhuman

TSL 3 BASIC

Gene AC106738.1, Length 359 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC106738.1-201ENST00000560487 VPS72Q15906 364 aa29.05■■■□□ 2.24
AC106738.1-201ENST00000560487 COL5A2P05997 1499 aaPredicted RBP29.04■■■□□ 2.24
AC106738.1-201ENST00000560487 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
AC106738.1-201ENST00000560487 GLI3P10071 1580 aa29.02■■■□□ 2.24
AC106738.1-201ENST00000560487 GJD4Q96KN9 370 aaPredicted RBP29.02■■■□□ 2.24
AC106738.1-201ENST00000560487 EVA1CP58658 441 aa29.01■■■□□ 2.23
AC106738.1-201ENST00000560487 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
AC106738.1-201ENST00000560487 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
AC106738.1-201ENST00000560487 STRN4Q9NRL3 753 aa28.99■■■□□ 2.23
AC106738.1-201ENST00000560487 CCDC9Q9Y3X0 531 aaKnown RBP28.99■■■□□ 2.23
AC106738.1-201ENST00000560487 BLMP54132 1417 aaPredicted RBP28.98■■■□□ 2.23
AC106738.1-201ENST00000560487 RTL1A6NKG5 1358 aa28.98■■■□□ 2.23
AC106738.1-201ENST00000560487 AMER1Q5JTC6 1135 aaPredicted RBP28.97■■■□□ 2.23
AC106738.1-201ENST00000560487 KIF24Q5T7B8 1368 aa28.97■■■□□ 2.23
AC106738.1-201ENST00000560487 NPC1L1Q9UHC9 1359 aa28.97■■■□□ 2.23
AC106738.1-201ENST00000560487 MAP3K19Q56UN5 1328 aa28.96■■■□□ 2.23
AC106738.1-201ENST00000560487 AXIN2Q9Y2T1 843 aa28.96■■■□□ 2.23
AC106738.1-201ENST00000560487 SPATA31A5Q5VU36 1347 aa28.95■■■□□ 2.23
AC106738.1-201ENST00000560487 SPATA31A7Q8IWB4 1347 aa28.95■■■□□ 2.23
AC106738.1-201ENST00000560487 AMPHP49418 695 aa28.94■■■□□ 2.22
AC106738.1-201ENST00000560487 IP6K1Q92551 441 aa28.94■■■□□ 2.22
AC106738.1-201ENST00000560487 CRB1P82279 1406 aa28.94■■■□□ 2.22
AC106738.1-201ENST00000560487 PEAK1Q9H792 1746 aa28.93■■■□□ 2.22
AC106738.1-201ENST00000560487 WDR17Q8IZU2 1322 aa28.93■■■□□ 2.22
AC106738.1-201ENST00000560487 WNK3Q9BYP7 1800 aa28.92■■■□□ 2.22
AC106738.1-201ENST00000560487 FBLN1P23142 703 aa28.92■■■□□ 2.22
AC106738.1-201ENST00000560487 RRS1Q15050 365 aaKnown RBP28.92■■■□□ 2.22
AC106738.1-201ENST00000560487 SPATA31A1Q5TZJ5 1347 aa28.92■■■□□ 2.22
AC106738.1-201ENST00000560487 LARP1Q6PKG0 1096 aaKnown RBP28.91■■■□□ 2.22
AC106738.1-201ENST00000560487 MORC1Q86VD1 984 aa28.91■■■□□ 2.22
AC106738.1-201ENST00000560487 RGS12O14924 1447 aa28.91■■■□□ 2.22
AC106738.1-201ENST00000560487 HOXC9P31274 260 aa28.9■■■□□ 2.22
AC106738.1-201ENST00000560487 ERBB3P21860 1342 aa28.9■■■□□ 2.22
AC106738.1-201ENST00000560487 BRWD3Q6RI45 1802 aa28.9■■■□□ 2.22
AC106738.1-201ENST00000560487 FLT4P35916 1363 aa28.89■■■□□ 2.22
AC106738.1-201ENST00000560487 THRAP3Q9Y2W1 955 aaKnown RBP28.88■■■□□ 2.21
AC106738.1-201ENST00000560487 THSD7AQ9UPZ6 1657 aa28.87■■■□□ 2.21
AC106738.1-201ENST00000560487 CSB-PGBD3P0DP91 1061 aa28.87■■■□□ 2.21
AC106738.1-201ENST00000560487 TOM1L2Q6ZVM7 507 aa28.87■■■□□ 2.21
AC106738.1-201ENST00000560487 UPF1Q92900 1129 aaKnown RBP eCLIP28.87■■■□□ 2.21
AC106738.1-201ENST00000560487 RGPD2P0DJD1 1756 aa28.87■■■□□ 2.21
AC106738.1-201ENST00000560487 ONECUT3O60422 494 aaPredicted RBP28.85■■■□□ 2.21
AC106738.1-201ENST00000560487 TCP11L2Q8N4U5 519 aa28.85■■■□□ 2.21
AC106738.1-201ENST00000560487 ANKRD24Q8TF21 1146 aa28.85■■■□□ 2.21
AC106738.1-201ENST00000560487 SMG6Q86US8 1419 aaKnown RBP28.85■■■□□ 2.21
AC106738.1-201ENST00000560487 TNNT2P45379 298 aaPredicted RBP28.84■■■□□ 2.21
AC106738.1-201ENST00000560487 CC2D1BQ5T0F9 858 aaKnown RBP28.84■■■□□ 2.21
AC106738.1-201ENST00000560487 BARGINQ6ZT62 677 aa28.84■■■□□ 2.21
AC106738.1-201ENST00000560487 EMILIN1Q9Y6C2 1016 aa28.84■■■□□ 2.21
AC106738.1-201ENST00000560487 INSRP06213 1382 aa28.84■■■□□ 2.21
AC106738.1-201ENST00000560487 PARP4Q9UKK3 1724 aaKnown RBP28.83■■■□□ 2.21
AC106738.1-201ENST00000560487 CARD10Q9BWT7 1032 aa28.83■■■□□ 2.21
AC106738.1-201ENST00000560487 USP35Q9P2H5 1018 aa28.83■■■□□ 2.21
AC106738.1-201ENST00000560487 POLKQ9UBT6 870 aa28.83■■■□□ 2.21
AC106738.1-201ENST00000560487 FAM98CQ17RN3 349 aaKnown RBP28.82■■■□□ 2.2
AC106738.1-201ENST00000560487 ZNF316A6NFI3 1004 aaPredicted RBP28.79■■■□□ 2.2
AC106738.1-201ENST00000560487 PPM1GO15355 546 aaPredicted RBP28.79■■■□□ 2.2
AC106738.1-201ENST00000560487 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
AC106738.1-201ENST00000560487 A0A0G2JS52 829 aa28.78■■■□□ 2.2
AC106738.1-201ENST00000560487 MYT1Q01538 1121 aa28.78■■■□□ 2.2
AC106738.1-201ENST00000560487 HSP90AB2PQ58FF8 381 aa28.78■■■□□ 2.2
AC106738.1-201ENST00000560487 SEPT12Q8IYM1 358 aa28.78■■■□□ 2.2
AC106738.1-201ENST00000560487 LTV1Q96GA3 475 aaPredicted RBP28.77■■■□□ 2.2
AC106738.1-201ENST00000560487 NLRP2Q9NX02 1062 aa28.77■■■□□ 2.2
AC106738.1-201ENST00000560487 CDCA7Q9BWT1 371 aaPredicted RBP28.75■■■□□ 2.19
AC106738.1-201ENST00000560487 LRRC37A3O60309 1634 aa28.73■■■□□ 2.19
AC106738.1-201ENST00000560487 DISP2A7MBM2 1401 aa28.71■■■□□ 2.19
AC106738.1-201ENST00000560487 CNGB1Q14028 1251 aaPredicted RBP28.71■■■□□ 2.19
AC106738.1-201ENST00000560487 KRT27Q7Z3Y8 459 aa28.68■■■□□ 2.18
AC106738.1-201ENST00000560487 MTHFSP49914 203 aa28.67■■■□□ 2.18
AC106738.1-201ENST00000560487 IL2RBP14784 551 aa28.66■■■□□ 2.18
AC106738.1-201ENST00000560487 PARD3Q8TEW0 1356 aa28.65■■■□□ 2.18
AC106738.1-201ENST00000560487 NBPF6Q5VWK0 638 aa28.65■■■□□ 2.18
AC106738.1-201ENST00000560487 NBPF4Q96M43 638 aa28.65■■■□□ 2.18
AC106738.1-201ENST00000560487 NCAPD2Q15021 1401 aa28.65■■■□□ 2.18
AC106738.1-201ENST00000560487 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
AC106738.1-201ENST00000560487 DDB1Q16531 1140 aa28.63■■■□□ 2.17
AC106738.1-201ENST00000560487 RGPD1P0DJD0 1748 aa28.63■■■□□ 2.17
AC106738.1-201ENST00000560487 TNS2Q63HR2 1409 aa28.62■■■□□ 2.17
AC106738.1-201ENST00000560487 PDE3BQ13370 1112 aa28.62■■■□□ 2.17
AC106738.1-201ENST00000560487 RALBP1Q15311 655 aa28.6■■■□□ 2.17
AC106738.1-201ENST00000560487 PPP2R1AP30153 589 aa28.59■■■□□ 2.17
AC106738.1-201ENST00000560487 EYA1Q99502 592 aa28.59■■■□□ 2.17
AC106738.1-201ENST00000560487 SHANK3Q9BYB0 1731 aa28.59■■■□□ 2.17
AC106738.1-201ENST00000560487 EXOC5O00471 708 aa28.58■■■□□ 2.17
AC106738.1-201ENST00000560487 SBF2Q86WG5 1849 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 USHBP1Q8N6Y0 703 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 RAPGEF4Q8WZA2 1011 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 IGSF1Q8N6C5 1336 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 OVOS2A0A0G2JMS6 1433 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 COL3A1P02461 1466 aaPredicted RBP28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 MEGF6O75095 1541 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 PKD1L3Q7Z443 1732 aa28.57■■■□□ 2.16
AC106738.1-201ENST00000560487 CFAP53Q96M91 514 aa28.56■■■□□ 2.16
AC106738.1-201ENST00000560487 PLEKHG2Q9H7P9 1386 aa28.55■■■□□ 2.16
AC106738.1-201ENST00000560487 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
AC106738.1-201ENST00000560487 DIAPH1O60610 1272 aaKnown RBP28.54■■■□□ 2.16
AC106738.1-201ENST00000560487 TATP17735 454 aaPredicted RBP28.54■■■□□ 2.16
AC106738.1-201ENST00000560487 IL13P35225 146 aa28.54■■■□□ 2.16
AC106738.1-201ENST00000560487 FAM196AQ6ZSG2 479 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms