RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
USP3-215ENST00000559771 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
USP3-215ENST00000559771 SLAIN2Q9P270 581 aa8.95□□□□□ -0.98
USP3-215ENST00000559771 TSR3Q9UJK0 312 aaKnown RBP8.95□□□□□ -0.98
USP3-215ENST00000559771 PTPRUQ92729 1446 aa8.95□□□□□ -0.98
USP3-215ENST00000559771 DIP2AQ14689 1571 aa8.95□□□□□ -0.98
USP3-215ENST00000559771 SPHKAPQ2M3C7 1700 aa8.94□□□□□ -0.98
USP3-215ENST00000559771 NUP155O75694 1391 aa8.94□□□□□ -0.98
USP3-215ENST00000559771 MSH6P52701 1360 aa8.94□□□□□ -0.98
USP3-215ENST00000559771 XRN1Q8IZH2 1706 aaKnown RBP8.94□□□□□ -0.98
USP3-215ENST00000559771 STK25O00506 426 aa8.93□□□□□ -0.98
USP3-215ENST00000559771 PPARGC1BQ86YN6 1023 aaKnown RBP8.93□□□□□ -0.98
USP3-215ENST00000559771 BCANQ96GW7 911 aa8.93□□□□□ -0.98
USP3-215ENST00000559771 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
USP3-215ENST00000559771 NCOA3Q9Y6Q9 1424 aa8.93□□□□□ -0.98
USP3-215ENST00000559771 LRP6O75581 1613 aa8.92□□□□□ -0.98
USP3-215ENST00000559771 SETBP1Q9Y6X0 1596 aa8.92□□□□□ -0.98
USP3-215ENST00000559771 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
USP3-215ENST00000559771 PPP1R15AO75807 674 aaPredicted RBP8.92□□□□□ -0.98
USP3-215ENST00000559771 CHGAP10645 457 aaKnown RBP8.92□□□□□ -0.98
USP3-215ENST00000559771 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP3-215ENST00000559771 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
USP3-215ENST00000559771 CLTCL1P53675 1640 aa8.91□□□□□ -0.98
USP3-215ENST00000559771 AHDC1Q5TGY3 1603 aaPredicted RBP8.91□□□□□ -0.98
USP3-215ENST00000559771 TRPM2O94759 1503 aa8.91□□□□□ -0.98
USP3-215ENST00000559771 ITGAEP38570 1179 aa8.91□□□□□ -0.98
USP3-215ENST00000559771 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
USP3-215ENST00000559771 JCADQ9P266 1359 aa8.9□□□□□ -0.98
USP3-215ENST00000559771 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
USP3-215ENST00000559771 SETD1AO15047 1707 aaKnown RBP8.9□□□□□ -0.98
USP3-215ENST00000559771 SHPRHQ149N8 1683 aa8.9□□□□□ -0.98
USP3-215ENST00000559771 NEXMIFQ5QGS0 1516 aa8.9□□□□□ -0.99
USP3-215ENST00000559771 RRBP1Q9P2E9 1410 aaKnown RBP8.89□□□□□ -0.99
USP3-215ENST00000559771 METP08581 1390 aa8.89□□□□□ -0.99
USP3-215ENST00000559771 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
USP3-215ENST00000559771 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
USP3-215ENST00000559771 NAIPQ13075 1403 aa8.88□□□□□ -0.99
USP3-215ENST00000559771 NALCNQ8IZF0 1738 aa8.88□□□□□ -0.99
USP3-215ENST00000559771 NHSL1Q5SYE7 1610 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 BRINP3Q76B58 766 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 CADPS2Q86UW7 1296 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.87□□□□□ -0.99
USP3-215ENST00000559771 DCCP43146 1447 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 MST1RQ04912 1400 aa8.87□□□□□ -0.99
USP3-215ENST00000559771 ASXL1Q8IXJ9 1541 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 WIPF1O43516 503 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 EVI5O60447 810 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 DGAT1O75907 488 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 MTRQ99707 1265 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 KIF1BO60333 1816 aa8.86□□□□□ -0.99
USP3-215ENST00000559771 ATF3P18847 181 aa8.85□□□□□ -0.99
USP3-215ENST00000559771 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
USP3-215ENST00000559771 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
USP3-215ENST00000559771 PCDHGA10Q9Y5H3 936 aa8.85□□□□□ -0.99
USP3-215ENST00000559771 SPATA31A6Q5VVP1 1343 aa8.84□□□□□ -0.99
USP3-215ENST00000559771 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
USP3-215ENST00000559771 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
USP3-215ENST00000559771 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
USP3-215ENST00000559771 PPLO60437 1756 aa8.84□□□□□ -1
USP3-215ENST00000559771 LAMC1P11047 1609 aa8.83□□□□□ -1
USP3-215ENST00000559771 WFS1O76024 890 aa8.83□□□□□ -1
USP3-215ENST00000559771 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
USP3-215ENST00000559771 PKDCCQ504Y2 493 aa8.83□□□□□ -1
USP3-215ENST00000559771 NKX2-3Q8TAU0 364 aa8.83□□□□□ -1
USP3-215ENST00000559771 LRCH3Q96II8 777 aa8.83□□□□□ -1
USP3-215ENST00000559771 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
USP3-215ENST00000559771 HFM1A2PYH4 1435 aa8.82□□□□□ -1
USP3-215ENST00000559771 PRAG1Q86YV5 1406 aa8.82□□□□□ -1
USP3-215ENST00000559771 NFX1Q12986 1120 aaKnown RBP8.82□□□□□ -1
USP3-215ENST00000559771 SUZ12Q15022 739 aaKnown RBP8.82□□□□□ -1
USP3-215ENST00000559771 ZNF326Q5BKZ1 582 aaKnown RBP8.82□□□□□ -1
USP3-215ENST00000559771 DDX17Q92841 729 aaKnown RBP8.82□□□□□ -1
USP3-215ENST00000559771 IL21Q9HBE4 155 aa8.82□□□□□ -1
USP3-215ENST00000559771 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
USP3-215ENST00000559771 PTCH1Q13635 1447 aa8.8□□□□□ -1
USP3-215ENST00000559771 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
USP3-215ENST00000559771 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
USP3-215ENST00000559771 NUTM2BA6NNL0 878 aaPredicted RBP8.79□□□□□ -1
USP3-215ENST00000559771 NUTM2EB1AL46 878 aaPredicted RBP8.79□□□□□ -1
USP3-215ENST00000559771 ST8SIA5O15466 376 aa8.79□□□□□ -1
USP3-215ENST00000559771 NUTM2AQ8IVF1 878 aaPredicted RBP8.79□□□□□ -1
USP3-215ENST00000559771 AAASQ9NRG9 546 aa8.79□□□□□ -1
USP3-215ENST00000559771 IFT172Q9UG01 1749 aa8.79□□□□□ -1
USP3-215ENST00000559771 ZNF772Q68DY9 489 aaPredicted RBP8.78□□□□□ -1
USP3-215ENST00000559771 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1
USP3-215ENST00000559771 PPP4CP60510 307 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
USP3-215ENST00000559771 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 LRRC59Q96AG4 307 aaKnown RBP8.77□□□□□ -1.01
USP3-215ENST00000559771 ORAI2Q96SN7 254 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 AFF2P51816 1311 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
USP3-215ENST00000559771 RPGRIP1LQ68CZ1 1315 aa8.77□□□□□ -1.01
USP3-215ENST00000559771 COL22A1Q8NFW1 1626 aaPredicted RBP8.76□□□□□ -1.01
USP3-215ENST00000559771 INSM1Q01101 510 aaPredicted RBP8.76□□□□□ -1.01
USP3-215ENST00000559771 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
USP3-215ENST00000559771 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms