RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 UNC5CLQ8IV45 518 aa19.11■□□□□ 0.65
SUPT16H-208ENST00000557652 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
SUPT16H-208ENST00000557652 INSRP06213 1382 aa19.1■□□□□ 0.65
SUPT16H-208ENST00000557652 AFF2P51816 1311 aa19.1■□□□□ 0.65
SUPT16H-208ENST00000557652 SOX12O15370 315 aa19.1■□□□□ 0.65
SUPT16H-208ENST00000557652 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
SUPT16H-208ENST00000557652 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 BCL9LQ86UU0 1499 aa19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 BTG4Q9NY30 223 aa19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 USP21Q9UK80 565 aa19.09■□□□□ 0.65
SUPT16H-208ENST00000557652 HOXC9P31274 260 aa19.08■□□□□ 0.64
SUPT16H-208ENST00000557652 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
SUPT16H-208ENST00000557652 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
SUPT16H-208ENST00000557652 TRPC5Q9UL62 973 aaPredicted RBP19.07■□□□□ 0.64
SUPT16H-208ENST00000557652 ERBB3P21860 1342 aa19.06■□□□□ 0.64
SUPT16H-208ENST00000557652 VPS72Q15906 364 aa19.06■□□□□ 0.64
SUPT16H-208ENST00000557652 ATRNO75882 1429 aa19.06■□□□□ 0.64
SUPT16H-208ENST00000557652 WDR17Q8IZU2 1322 aa19.05■□□□□ 0.64
SUPT16H-208ENST00000557652 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
SUPT16H-208ENST00000557652 EVA1CP58658 441 aa19.05■□□□□ 0.64
SUPT16H-208ENST00000557652 PRKRIP1Q9H875 184 aaPredicted RBP19.05■□□□□ 0.64
SUPT16H-208ENST00000557652 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
SUPT16H-208ENST00000557652 ZBTB7CA1YPR0 619 aa19.04■□□□□ 0.64
SUPT16H-208ENST00000557652 CRB1P82279 1406 aa19.04■□□□□ 0.64
SUPT16H-208ENST00000557652 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 ANP32CO43423 234 aa19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 PPP2R1AP30153 589 aa19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 MTHFSP49914 203 aa19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
SUPT16H-208ENST00000557652 FBLN1P23142 703 aa19.02■□□□□ 0.64
SUPT16H-208ENST00000557652 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
SUPT16H-208ENST00000557652 PLEKHG2Q9H7P9 1386 aa19.01■□□□□ 0.63
SUPT16H-208ENST00000557652 PPM1GO15355 546 aaPredicted RBP19■□□□□ 0.63
SUPT16H-208ENST00000557652 HSP90AB2PQ58FF8 381 aa19■□□□□ 0.63
SUPT16H-208ENST00000557652 CARD10Q9BWT7 1032 aa19■□□□□ 0.63
SUPT16H-208ENST00000557652 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
SUPT16H-208ENST00000557652 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
SUPT16H-208ENST00000557652 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
SUPT16H-208ENST00000557652 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
SUPT16H-208ENST00000557652 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
SUPT16H-208ENST00000557652 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
SUPT16H-208ENST00000557652 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
SUPT16H-208ENST00000557652 STRN4Q9NRL3 753 aa18.99■□□□□ 0.63
SUPT16H-208ENST00000557652 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
SUPT16H-208ENST00000557652 TOM1L2Q6ZVM7 507 aa18.98■□□□□ 0.63
SUPT16H-208ENST00000557652 GJD4Q96KN9 370 aaPredicted RBP18.98■□□□□ 0.63
SUPT16H-208ENST00000557652 NCAPD2Q15021 1401 aa18.98■□□□□ 0.63
SUPT16H-208ENST00000557652 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
SUPT16H-208ENST00000557652 BARGINQ6ZT62 677 aa18.97■□□□□ 0.63
SUPT16H-208ENST00000557652 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
SUPT16H-208ENST00000557652 RGPD1P0DJD0 1748 aa18.97■□□□□ 0.63
SUPT16H-208ENST00000557652 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
SUPT16H-208ENST00000557652 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
SUPT16H-208ENST00000557652 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
SUPT16H-208ENST00000557652 GLI3P10071 1580 aa18.96■□□□□ 0.63
SUPT16H-208ENST00000557652 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
SUPT16H-208ENST00000557652 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
SUPT16H-208ENST00000557652 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
SUPT16H-208ENST00000557652 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 ONECUT3O60422 494 aaPredicted RBP18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 RXRBP28702 533 aa18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 EIF4A2Q14240 407 aaKnown RBP18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
SUPT16H-208ENST00000557652 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
SUPT16H-208ENST00000557652 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
SUPT16H-208ENST00000557652 IL13P35225 146 aa18.92■□□□□ 0.62
SUPT16H-208ENST00000557652 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
SUPT16H-208ENST00000557652 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
SUPT16H-208ENST00000557652 KDRP35968 1356 aa18.91■□□□□ 0.62
SUPT16H-208ENST00000557652 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
SUPT16H-208ENST00000557652 DISP2A7MBM2 1401 aa18.9■□□□□ 0.62
SUPT16H-208ENST00000557652 NBPF6Q5VWK0 638 aa18.89■□□□□ 0.61
SUPT16H-208ENST00000557652 NBPF4Q96M43 638 aa18.89■□□□□ 0.61
SUPT16H-208ENST00000557652 EYA1Q99502 592 aa18.89■□□□□ 0.61
SUPT16H-208ENST00000557652 IL2RBP14784 551 aa18.88■□□□□ 0.61
SUPT16H-208ENST00000557652 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
SUPT16H-208ENST00000557652 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
SUPT16H-208ENST00000557652 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
SUPT16H-208ENST00000557652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.611e-7■■□□□ 12.5
SUPT16H-208ENST00000557652 USP35Q9P2H5 1018 aa18.85■□□□□ 0.61
SUPT16H-208ENST00000557652 LRRC37A3O60309 1634 aa18.85■□□□□ 0.61
SUPT16H-208ENST00000557652 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
SUPT16H-208ENST00000557652 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
SUPT16H-208ENST00000557652 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
SUPT16H-208ENST00000557652 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
SUPT16H-208ENST00000557652 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
SUPT16H-208ENST00000557652 TNS2Q63HR2 1409 aa18.83■□□□□ 0.61
SUPT16H-208ENST00000557652 FCHSD2O94868 740 aa18.83■□□□□ 0.6
SUPT16H-208ENST00000557652 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
SUPT16H-208ENST00000557652 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
SUPT16H-208ENST00000557652 RGS12O14924 1447 aa18.82■□□□□ 0.6
SUPT16H-208ENST00000557652 EXOC5O00471 708 aa18.81■□□□□ 0.6
SUPT16H-208ENST00000557652 DDB1Q16531 1140 aa18.81■□□□□ 0.6
SUPT16H-208ENST00000557652 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
SUPT16H-208ENST00000557652 SEPT12Q8IYM1 358 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms