RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 FAM117AQ9C073 453 aa7.68□□□□□ -1.18
FOXN3-213ENST00000556916 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
FOXN3-213ENST00000556916 UPP2O95045 317 aa7.67□□□□□ -1.18
FOXN3-213ENST00000556916 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
FOXN3-213ENST00000556916 ARHGAP9Q9BRR9 750 aa7.67□□□□□ -1.18
FOXN3-213ENST00000556916 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
FOXN3-213ENST00000556916 NR6A1Q15406 480 aa7.66□□□□□ -1.18
FOXN3-213ENST00000556916 SLC10A4Q96EP9 437 aa7.66□□□□□ -1.18
FOXN3-213ENST00000556916 FKBPLQ9UIM3 349 aa7.66□□□□□ -1.18
FOXN3-213ENST00000556916 EMILIN1Q9Y6C2 1016 aa7.66□□□□□ -1.18
FOXN3-213ENST00000556916 PDXDC2PQ6P474 469 aa7.65□□□□□ -1.18
FOXN3-213ENST00000556916 ZC3H4Q9UPT8 1303 aaKnown RBP7.64□□□□□ -1.19
FOXN3-213ENST00000556916 AP1G2O75843 785 aa7.64□□□□□ -1.19
FOXN3-213ENST00000556916 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
FOXN3-213ENST00000556916 DNMT3LQ9UJW3 386 aa7.64□□□□□ -1.19
FOXN3-213ENST00000556916 PPP1R26Q5T8A7 1209 aaPredicted RBP7.63□□□□□ -1.19
FOXN3-213ENST00000556916 ZSCAN1Q8NBB4 408 aa7.63□□□□□ -1.19
FOXN3-213ENST00000556916 SOS2Q07890 1332 aaPredicted RBP7.62□□□□□ -1.19
FOXN3-213ENST00000556916 USP17L8P0C7I0 530 aa7.62□□□□□ -1.19
FOXN3-213ENST00000556916 VSIG8P0DPA2 414 aa7.62□□□□□ -1.19
FOXN3-213ENST00000556916 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
FOXN3-213ENST00000556916 CBLBQ13191 982 aa7.62□□□□□ -1.19
FOXN3-213ENST00000556916 ZBTB33Q86T24 672 aa7.62□□□□□ -1.19
FOXN3-213ENST00000556916 TSEN34Q9BSV6 310 aaKnown RBP7.62□□□□□ -1.19
FOXN3-213ENST00000556916 INTS6LQ5JSJ4 861 aaKnown RBP7.61□□□□□ -1.19
FOXN3-213ENST00000556916 EPS8L1Q8TE68 723 aa7.61□□□□□ -1.19
FOXN3-213ENST00000556916 KCTD15Q96SI1 283 aaPredicted RBP7.61□□□□□ -1.19
FOXN3-213ENST00000556916 OCSTAMPQ9BR26 566 aa7.61□□□□□ -1.19
FOXN3-213ENST00000556916 HMX1Q9NP08 348 aaPredicted RBP7.61□□□□□ -1.19
FOXN3-213ENST00000556916 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
FOXN3-213ENST00000556916 CDV3Q9UKY7 258 aaKnown RBP7.61□□□□□ -1.19
FOXN3-213ENST00000556916 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
FOXN3-213ENST00000556916 PPFIA3O75145 1194 aa7.6□□□□□ -1.19
FOXN3-213ENST00000556916 ADAM32Q8TC27 787 aa7.6□□□□□ -1.19
FOXN3-213ENST00000556916 TTLL8A6PVC2 850 aa7.59□□□□□ -1.19
FOXN3-213ENST00000556916 PTK2Q05397 1052 aa7.59□□□□□ -1.19
FOXN3-213ENST00000556916 Q6ZVU0 165 aa7.58□□□□□ -1.2
FOXN3-213ENST00000556916 SPINT1O43278 529 aa7.57□□□□□ -1.2
FOXN3-213ENST00000556916 RFC5P40937 340 aa7.57□□□□□ -1.2
FOXN3-213ENST00000556916 DHX9Q08211 1270 aaKnown RBP7.57□□□□□ -1.2
FOXN3-213ENST00000556916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.57□□□□□ -1.2
FOXN3-213ENST00000556916 NBPF20Q3BBV1 942 aa7.57□□□□□ -1.2
FOXN3-213ENST00000556916 PNMA1Q8ND90 353 aa7.57□□□□□ -1.2
FOXN3-213ENST00000556916 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
FOXN3-213ENST00000556916 RAB15P59190 212 aa7.56□□□□□ -1.2
FOXN3-213ENST00000556916 AGBL1Q96MI9 1066 aa7.56□□□□□ -1.2
FOXN3-213ENST00000556916 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
FOXN3-213ENST00000556916 RELBQ01201 579 aa7.55□□□□□ -1.2
FOXN3-213ENST00000556916 PTSQ03393 145 aa7.55□□□□□ -1.2
FOXN3-213ENST00000556916 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
FOXN3-213ENST00000556916 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
FOXN3-213ENST00000556916 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-213ENST00000556916 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-213ENST00000556916 INSM2Q96T92 566 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-213ENST00000556916 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
FOXN3-213ENST00000556916 CTSOP43234 321 aaPredicted RBP7.52□□□□□ -1.21
FOXN3-213ENST00000556916 NEUROD2Q15784 382 aa7.52□□□□□ -1.21
FOXN3-213ENST00000556916 POLMQ9NP87 494 aaPredicted RBP7.52□□□□□ -1.21
FOXN3-213ENST00000556916 ADH1AP07327 375 aa7.51□□□□□ -1.21
FOXN3-213ENST00000556916 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
FOXN3-213ENST00000556916 ESPNB1AK53 854 aa7.5□□□□□ -1.21
FOXN3-213ENST00000556916 ERVH48-1M5A8F1 160 aa7.5□□□□□ -1.21
FOXN3-213ENST00000556916 KRT76Q01546 638 aa7.5□□□□□ -1.21
FOXN3-213ENST00000556916 GPR161Q8N6U8 529 aaKnown RBP7.5□□□□□ -1.21
FOXN3-213ENST00000556916 RNF217Q8TC41 542 aa7.5□□□□□ -1.21
FOXN3-213ENST00000556916 ZNF395Q9H8N7 513 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-213ENST00000556916 GOPCQ9HD26 462 aa7.5□□□□□ -1.21
FOXN3-213ENST00000556916 LILRA1O75019 489 aa7.49□□□□□ -1.21
FOXN3-213ENST00000556916 SLC35F4A4IF30 521 aa7.48□□□□□ -1.21
FOXN3-213ENST00000556916 TMEM259Q4ZIN3 620 aa7.48□□□□□ -1.21
FOXN3-213ENST00000556916 CNTNAP3BQ96NU0 1288 aa7.48□□□□□ -1.21
FOXN3-213ENST00000556916 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
FOXN3-213ENST00000556916 CYLDQ9NQC7 956 aa7.48□□□□□ -1.21
FOXN3-213ENST00000556916 CDC14CA4D256 554 aa7.47□□□□□ -1.21
FOXN3-213ENST00000556916 ITGA6P23229 1130 aa7.47□□□□□ -1.21
FOXN3-213ENST00000556916 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
FOXN3-213ENST00000556916 FOXD4L5Q5VV16 416 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-213ENST00000556916 IL27Q8NEV9 243 aa7.47□□□□□ -1.21
FOXN3-213ENST00000556916 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-213ENST00000556916 PCDHB9Q9Y5E1 797 aa7.47□□□□□ -1.21
FOXN3-213ENST00000556916 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
FOXN3-213ENST00000556916 FBXO45P0C2W1 286 aa7.46□□□□□ -1.22
FOXN3-213ENST00000556916 BRPF1P55201 1214 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-213ENST00000556916 SEPT12Q8IYM1 358 aa7.46□□□□□ -1.22
FOXN3-213ENST00000556916 KDF1Q8NAX2 398 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-213ENST00000556916 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-213ENST00000556916 SENP3-EIF4A1A0A087X0R7 540 aa7.45□□□□□ -1.22
FOXN3-213ENST00000556916 PTGIRP43119 386 aa7.45□□□□□ -1.22
FOXN3-213ENST00000556916 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
FOXN3-213ENST00000556916 RNFT1Q5M7Z0 435 aa7.44□□□□□ -1.22
FOXN3-213ENST00000556916 VWA5B2Q8N398 1253 aa7.44□□□□□ -1.22
FOXN3-213ENST00000556916 GIGYF1O75420 1035 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-213ENST00000556916 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
FOXN3-213ENST00000556916 SV2AQ7L0J3 742 aa7.41□□□□□ -1.22
FOXN3-213ENST00000556916 ATP5J2-PTCD1G3V325 749 aa7.4□□□□□ -1.22
FOXN3-213ENST00000556916 GPR37L1O60883 481 aa7.4□□□□□ -1.22
FOXN3-213ENST00000556916 RHOQP17081 205 aa7.4□□□□□ -1.22
FOXN3-213ENST00000556916 ZNF385CQ66K41 422 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-213ENST00000556916 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
FOXN3-213ENST00000556916 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms