RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 N4BP2L2Q92802 583 aaPredicted RBP10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 A0A1B0GUA9 196 aa10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 GOLGA6L10A6NI86 522 aa10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 ISM2Q6H9L7 571 aa10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
GTF2A1-203ENST00000553612 ADCY5O95622 1261 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 LNPKQ9C0E8 428 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 RABEP2Q9H5N1 569 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 DONSONQ9NYP3 566 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 NUCB2P80303 420 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 ARMC3Q5W041 872 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 MCTP2Q6DN12 878 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 HDAC1Q13547 482 aaPredicted RBP10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 WWC2Q6AWC2 1192 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 SGSM3Q96HU1 749 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 VPS18Q9P253 973 aa10.64□□□□□ -0.71
GTF2A1-203ENST00000553612 FSD2A1L4K1 749 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 ST18O60284 1047 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 RBSNQ9H1K0 784 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 GUCY2CP25092 1073 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 TAX1BP1Q86VP1 789 aa10.63□□□□□ -0.71
GTF2A1-203ENST00000553612 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 ATP2C2O75185 946 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 PLEKHA4Q9H4M7 779 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 VEZTQ9HBM0 779 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 PHACTR2O75167 634 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 PTPN14Q15678 1187 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 OTUD6BQ8N6M0 293 aa10.62□□□□□ -0.71
GTF2A1-203ENST00000553612 CEP135Q66GS9 1140 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 LIG3P49916 1009 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 PIBF1Q8WXW3 757 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 FMNL2Q96PY5 1086 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 ERLIN2O94905 339 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 ELF2Q15723 593 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 TMEM165Q9HC07 324 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.61□□□□□ -0.71
GTF2A1-203ENST00000553612 RPSAP08865 295 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 EZRP15311 586 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 KIF2AO00139 706 aaPredicted RBP10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 SHTN1A0MZ66 631 aa10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 CEBPZQ03701 1054 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 HS1BP3Q53T59 392 aa10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 FIBPO43427 364 aa10.6□□□□□ -0.71
GTF2A1-203ENST00000553612 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 VPS37CA5D8V6 355 aaPredicted RBP10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 EIF3JO75822 258 aaKnown RBP10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 RNF168Q8IYW5 571 aaPredicted RBP10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 RLBP1P12271 317 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 ATP2B1P20020 1258 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 CCNB3Q8WWL7 1395 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 PPARDQ03181 441 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 UBAP1Q9NZ09 502 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 BCAR3O75815 825 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 MCM6Q14566 821 aa10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 ZNHIT6Q9NWK9 470 aaKnown RBP10.59□□□□□ -0.71
GTF2A1-203ENST00000553612 FILIP1Q7Z7B0 1213 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 PDILTQ8N807 584 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 SEPT14Q6ZU15 432 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 RILPL2Q969X0 211 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 CRACR2AQ9BSW2 395 aa10.58□□□□□ -0.72
GTF2A1-203ENST00000553612 KIF2CQ99661 725 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 MMP14P50281 582 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 CAMK4Q16566 473 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 HOOK3Q86VS8 718 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 MICAL1Q8TDZ2 1067 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 CCDC114Q96M63 670 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 PAX3P23760 479 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 MICALCLQ6ZW33 695 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 BICD2Q8TD16 824 aa10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 OAS2P29728 719 aaKnown RBP10.57□□□□□ -0.72
GTF2A1-203ENST00000553612 RINLQ6ZS11 566 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 TRIM6Q9C030 488 aaPredicted RBP10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 MYLK4Q86YV6 388 aaPredicted RBP10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms