RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 STRN4Q9NRL3 753 aa25.49■■□□□ 1.67
DDX54-209ENST00000551912 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
DDX54-209ENST00000551912 MORC1Q86VD1 984 aa25.48■■□□□ 1.67
DDX54-209ENST00000551912 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
DDX54-209ENST00000551912 ZNF316A6NFI3 1004 aaPredicted RBP25.47■■□□□ 1.67
DDX54-209ENST00000551912 RXRBP28702 533 aa25.47■■□□□ 1.67
DDX54-209ENST00000551912 CCDC9Q9Y3X0 531 aaKnown RBP25.47■■□□□ 1.67
DDX54-209ENST00000551912 COL5A2P05997 1499 aaPredicted RBP25.47■■□□□ 1.67
DDX54-209ENST00000551912 NPC1L1Q9UHC9 1359 aa25.46■■□□□ 1.67
DDX54-209ENST00000551912 AMPHP49418 695 aa25.46■■□□□ 1.67
DDX54-209ENST00000551912 RBM6P78332 1123 aaKnown RBP25.46■■□□□ 1.67
DDX54-209ENST00000551912 CC2D1BQ5T0F9 858 aaKnown RBP25.46■■□□□ 1.67
DDX54-209ENST00000551912 GJD4Q96KN9 370 aaPredicted RBP25.46■■□□□ 1.67
DDX54-209ENST00000551912 TNNT2P45379 298 aaPredicted RBP25.45■■□□□ 1.66
DDX54-209ENST00000551912 DDX10Q13206 875 aaKnown RBP25.45■■□□□ 1.66
DDX54-209ENST00000551912 IP6K1Q92551 441 aa25.45■■□□□ 1.66
DDX54-209ENST00000551912 BLMP54132 1417 aaPredicted RBP25.43■■□□□ 1.66
DDX54-209ENST00000551912 RTL1A6NKG5 1358 aa25.43■■□□□ 1.66
DDX54-209ENST00000551912 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
DDX54-209ENST00000551912 HOXC9P31274 260 aa25.42■■□□□ 1.66
DDX54-209ENST00000551912 LARP1Q6PKG0 1096 aaKnown RBP25.42■■□□□ 1.66
DDX54-209ENST00000551912 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
DDX54-209ENST00000551912 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
DDX54-209ENST00000551912 SPATA31A5Q5VU36 1347 aa25.4■■□□□ 1.66
DDX54-209ENST00000551912 SPATA31A7Q8IWB4 1347 aa25.4■■□□□ 1.66
DDX54-209ENST00000551912 CSB-PGBD3P0DP91 1061 aa25.4■■□□□ 1.66
DDX54-209ENST00000551912 EMILIN1Q9Y6C2 1016 aa25.4■■□□□ 1.66
DDX54-209ENST00000551912 WDR17Q8IZU2 1322 aa25.39■■□□□ 1.66
DDX54-209ENST00000551912 POLKQ9UBT6 870 aa25.39■■□□□ 1.66
DDX54-209ENST00000551912 FLT4P35916 1363 aa25.39■■□□□ 1.65
DDX54-209ENST00000551912 GLI3P10071 1580 aa25.39■■□□□ 1.65
DDX54-209ENST00000551912 ERBB3P21860 1342 aa25.38■■□□□ 1.65
DDX54-209ENST00000551912 MAP2P11137 1827 aaKnown RBP25.38■■□□□ 1.65
DDX54-209ENST00000551912 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
DDX54-209ENST00000551912 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
DDX54-209ENST00000551912 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
DDX54-209ENST00000551912 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
DDX54-209ENST00000551912 CRB1P82279 1406 aa25.37■■□□□ 1.65
DDX54-209ENST00000551912 CDK12Q9NYV4 1490 aaPredicted RBP25.36■■□□□ 1.65
DDX54-209ENST00000551912 ILDR2Q71H61 639 aa25.36■■□□□ 1.65
DDX54-209ENST00000551912 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
DDX54-209ENST00000551912 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
DDX54-209ENST00000551912 HSP90AB2PQ58FF8 381 aa25.35■■□□□ 1.65
DDX54-209ENST00000551912 LTV1Q96GA3 475 aaPredicted RBP25.35■■□□□ 1.65
DDX54-209ENST00000551912 INSRP06213 1382 aa25.34■■□□□ 1.65
DDX54-209ENST00000551912 TCP11L2Q8N4U5 519 aa25.33■■□□□ 1.65
DDX54-209ENST00000551912 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
DDX54-209ENST00000551912 FAM98CQ17RN3 349 aaKnown RBP25.32■■□□□ 1.64
DDX54-209ENST00000551912 CARD10Q9BWT7 1032 aa25.32■■□□□ 1.64
DDX54-209ENST00000551912 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
DDX54-209ENST00000551912 RGS12O14924 1447 aa25.31■■□□□ 1.64
DDX54-209ENST00000551912 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
DDX54-209ENST00000551912 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
DDX54-209ENST00000551912 BARGINQ6ZT62 677 aa25.3■■□□□ 1.64
DDX54-209ENST00000551912 A0A0G2JS52 829 aa25.28■■□□□ 1.64
DDX54-209ENST00000551912 MYT1Q01538 1121 aa25.28■■□□□ 1.64
DDX54-209ENST00000551912 FAM208AQ9UK61 1670 aaKnown RBP25.28■■□□□ 1.64
DDX54-209ENST00000551912 MTHFSP49914 203 aa25.27■■□□□ 1.64
DDX54-209ENST00000551912 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
DDX54-209ENST00000551912 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
DDX54-209ENST00000551912 THSD7AQ9UPZ6 1657 aa25.23■■□□□ 1.63
DDX54-209ENST00000551912 EIF4A2Q14240 407 aaKnown RBP25.22■■□□□ 1.63
DDX54-209ENST00000551912 NBPF6Q5VWK0 638 aa25.22■■□□□ 1.63
DDX54-209ENST00000551912 NBPF4Q96M43 638 aa25.22■■□□□ 1.63
DDX54-209ENST00000551912 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
DDX54-209ENST00000551912 PPP2R1AP30153 589 aa25.21■■□□□ 1.63
DDX54-209ENST00000551912 RGPD2P0DJD1 1756 aa25.21■■□□□ 1.63
DDX54-209ENST00000551912 RALBP1Q15311 655 aa25.2■■□□□ 1.62
DDX54-209ENST00000551912 IL2RBP14784 551 aa25.18■■□□□ 1.62
DDX54-209ENST00000551912 WNK3Q9BYP7 1800 aa25.18■■□□□ 1.62
DDX54-209ENST00000551912 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
DDX54-209ENST00000551912 KRT27Q7Z3Y8 459 aa25.17■■□□□ 1.62
DDX54-209ENST00000551912 USHBP1Q8N6Y0 703 aa25.17■■□□□ 1.62
DDX54-209ENST00000551912 EYA1Q99502 592 aa25.17■■□□□ 1.62
DDX54-209ENST00000551912 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
DDX54-209ENST00000551912 PARP4Q9UKK3 1724 aaKnown RBP25.16■■□□□ 1.62
DDX54-209ENST00000551912 DDB1Q16531 1140 aa25.15■■□□□ 1.62
DDX54-209ENST00000551912 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
DDX54-209ENST00000551912 IL13P35225 146 aa25.14■■□□□ 1.62
DDX54-209ENST00000551912 DIAPH1O60610 1272 aaKnown RBP25.13■■□□□ 1.61
DDX54-209ENST00000551912 PDE3BQ13370 1112 aa25.13■■□□□ 1.61
DDX54-209ENST00000551912 NCAPD2Q15021 1401 aa25.12■■□□□ 1.61
DDX54-209ENST00000551912 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
DDX54-209ENST00000551912 LRRC37A3O60309 1634 aa25.12■■□□□ 1.61
DDX54-209ENST00000551912 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
DDX54-209ENST00000551912 COL3A1P02461 1466 aaPredicted RBP25.11■■□□□ 1.61
DDX54-209ENST00000551912 EXOC5O00471 708 aa25.11■■□□□ 1.61
DDX54-209ENST00000551912 PRKRIP1Q9H875 184 aaPredicted RBP25.11■■□□□ 1.61
DDX54-209ENST00000551912 MYBBP1AQ9BQG0 1328 aaKnown RBP25.1■■□□□ 1.61
DDX54-209ENST00000551912 MEGF6O75095 1541 aa25.09■■□□□ 1.61
DDX54-209ENST00000551912 TATP17735 454 aaPredicted RBP25.09■■□□□ 1.61
DDX54-209ENST00000551912 TNS2Q63HR2 1409 aa25.09■■□□□ 1.61
DDX54-209ENST00000551912 EP400Q96L91 3159 aa25.09■■□□□ 1.61
DDX54-209ENST00000551912 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
DDX54-209ENST00000551912 RGPD1P0DJD0 1748 aa25.06■■□□□ 1.6
DDX54-209ENST00000551912 FAM182BQ5T319 152 aa25.05■■□□□ 1.6
DDX54-209ENST00000551912 SULT6B1Q6IMI4 303 aa25.05■■□□□ 1.6
DDX54-209ENST00000551912 ZCRB1Q8TBF4 217 aaKnown RBP25.04■■□□□ 1.6
DDX54-209ENST00000551912 NUDCQ9Y266 331 aa25.04■■□□□ 1.6
DDX54-209ENST00000551912 U2SURPO15042 1029 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms