RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 CDK12Q9NYV4 1490 aaPredicted RBP24.22■■□□□ 1.47
CDK4-210ENST00000551888 CGNL1Q0VF96 1302 aa24.22■■□□□ 1.47
CDK4-210ENST00000551888 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
CDK4-210ENST00000551888 PEAK1Q9H792 1746 aa24.21■■□□□ 1.47
CDK4-210ENST00000551888 GJD4Q96KN9 370 aaPredicted RBP24.21■■□□□ 1.47
CDK4-210ENST00000551888 STRN4Q9NRL3 753 aa24.2■■□□□ 1.46
CDK4-210ENST00000551888 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
CDK4-210ENST00000551888 BRWD3Q6RI45 1802 aa24.18■■□□□ 1.46
CDK4-210ENST00000551888 MAP3K19Q56UN5 1328 aa24.17■■□□□ 1.46
CDK4-210ENST00000551888 LARP1Q6PKG0 1096 aaKnown RBP24.17■■□□□ 1.46
CDK4-210ENST00000551888 WNK3Q9BYP7 1800 aa24.17■■□□□ 1.46
CDK4-210ENST00000551888 SPATA31A5Q5VU36 1347 aa24.16■■□□□ 1.46
CDK4-210ENST00000551888 SPATA31A7Q8IWB4 1347 aa24.16■■□□□ 1.46
CDK4-210ENST00000551888 PER1O15534 1290 aaPredicted RBP24.16■■□□□ 1.46
CDK4-210ENST00000551888 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
CDK4-210ENST00000551888 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
CDK4-210ENST00000551888 RRS1Q15050 365 aaKnown RBP24.14■■□□□ 1.45
CDK4-210ENST00000551888 AMER1Q5JTC6 1135 aaPredicted RBP24.14■■□□□ 1.45
CDK4-210ENST00000551888 NSD2O96028 1365 aa24.14■■□□□ 1.45
CDK4-210ENST00000551888 SPATA31A1Q5TZJ5 1347 aa24.13■■□□□ 1.45
CDK4-210ENST00000551888 KNSTRNQ9Y448 316 aa24.13■■□□□ 1.45
CDK4-210ENST00000551888 RGPD2P0DJD1 1756 aa24.13■■□□□ 1.45
CDK4-210ENST00000551888 CRB1P82279 1406 aa24.12■■□□□ 1.45
CDK4-210ENST00000551888 EVA1CP58658 441 aa24.12■■□□□ 1.45
CDK4-210ENST00000551888 BLMP54132 1417 aaPredicted RBP24.11■■□□□ 1.45
CDK4-210ENST00000551888 FAM208AQ9UK61 1670 aaKnown RBP24.11■■□□□ 1.45
CDK4-210ENST00000551888 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
CDK4-210ENST00000551888 RTL1A6NKG5 1358 aa24.1■■□□□ 1.45
CDK4-210ENST00000551888 ERBB3P21860 1342 aa24.1■■□□□ 1.45
CDK4-210ENST00000551888 HOXC9P31274 260 aa24.09■■□□□ 1.45
CDK4-210ENST00000551888 IP6K1Q92551 441 aa24.09■■□□□ 1.45
CDK4-210ENST00000551888 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
CDK4-210ENST00000551888 FAM98CQ17RN3 349 aaKnown RBP24.08■■□□□ 1.45
CDK4-210ENST00000551888 EMILIN1Q9Y6C2 1016 aa24.08■■□□□ 1.45
CDK4-210ENST00000551888 ONECUT3O60422 494 aaPredicted RBP24.07■■□□□ 1.44
CDK4-210ENST00000551888 TNNT2P45379 298 aaPredicted RBP24.06■■□□□ 1.44
CDK4-210ENST00000551888 AMPHP49418 695 aa24.06■■□□□ 1.44
CDK4-210ENST00000551888 PARP4Q9UKK3 1724 aaKnown RBP24.06■■□□□ 1.44
CDK4-210ENST00000551888 TOM1L2Q6ZVM7 507 aa24.05■■□□□ 1.44
CDK4-210ENST00000551888 SEPT12Q8IYM1 358 aa24.05■■□□□ 1.44
CDK4-210ENST00000551888 ANKRD24Q8TF21 1146 aa24.05■■□□□ 1.44
CDK4-210ENST00000551888 FLT4P35916 1363 aa24.04■■□□□ 1.44
CDK4-210ENST00000551888 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
CDK4-210ENST00000551888 LRRC37A3O60309 1634 aa24.04■■□□□ 1.44
CDK4-210ENST00000551888 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 NPC1L1Q9UHC9 1359 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 CSB-PGBD3P0DP91 1061 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 MORC1Q86VD1 984 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 TCP11L2Q8N4U5 519 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 POLKQ9UBT6 870 aa24.03■■□□□ 1.44
CDK4-210ENST00000551888 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
CDK4-210ENST00000551888 CC2D1BQ5T0F9 858 aaKnown RBP24.02■■□□□ 1.44
CDK4-210ENST00000551888 LTV1Q96GA3 475 aaPredicted RBP24.02■■□□□ 1.44
CDK4-210ENST00000551888 BARGINQ6ZT62 677 aa24.01■■□□□ 1.43
CDK4-210ENST00000551888 INSRP06213 1382 aa24.01■■□□□ 1.43
CDK4-210ENST00000551888 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
CDK4-210ENST00000551888 DISP2A7MBM2 1401 aa24■■□□□ 1.43
CDK4-210ENST00000551888 SOCS7O14512 581 aa23.99■■□□□ 1.43
CDK4-210ENST00000551888 THRAP3Q9Y2W1 955 aaKnown RBP23.99■■□□□ 1.43
CDK4-210ENST00000551888 A0A0G2JS52 829 aa23.98■■□□□ 1.43
CDK4-210ENST00000551888 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
CDK4-210ENST00000551888 MYT1Q01538 1121 aa23.98■■□□□ 1.43
CDK4-210ENST00000551888 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
CDK4-210ENST00000551888 EP400Q96L91 3159 aa23.98■■□□□ 1.43
CDK4-210ENST00000551888 NLRP2Q9NX02 1062 aa23.97■■□□□ 1.43
CDK4-210ENST00000551888 DDX10Q13206 875 aaKnown RBP23.94■■□□□ 1.42
CDK4-210ENST00000551888 SHANK3Q9BYB0 1731 aa23.93■■□□□ 1.42
CDK4-210ENST00000551888 NBPF6Q5VWK0 638 aa23.92■■□□□ 1.42
CDK4-210ENST00000551888 KRT27Q7Z3Y8 459 aa23.92■■□□□ 1.42
CDK4-210ENST00000551888 NBPF4Q96M43 638 aa23.92■■□□□ 1.42
CDK4-210ENST00000551888 NCAPD2Q15021 1401 aa23.91■■□□□ 1.42
CDK4-210ENST00000551888 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
CDK4-210ENST00000551888 FAM182BQ5T319 152 aa23.9■■□□□ 1.42
CDK4-210ENST00000551888 USHBP1Q8N6Y0 703 aa23.9■■□□□ 1.42
CDK4-210ENST00000551888 MEGF6O75095 1541 aa23.89■■□□□ 1.42
CDK4-210ENST00000551888 TNS2Q63HR2 1409 aa23.88■■□□□ 1.41
CDK4-210ENST00000551888 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
CDK4-210ENST00000551888 COL3A1P02461 1466 aaPredicted RBP23.87■■□□□ 1.41
CDK4-210ENST00000551888 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
CDK4-210ENST00000551888 MTHFSP49914 203 aa23.86■■□□□ 1.41
CDK4-210ENST00000551888 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
CDK4-210ENST00000551888 SBF2Q86WG5 1849 aa23.85■■□□□ 1.41
CDK4-210ENST00000551888 IL2RBP14784 551 aa23.85■■□□□ 1.41
CDK4-210ENST00000551888 CDCA7Q9BWT1 371 aaPredicted RBP23.85■■□□□ 1.41
CDK4-210ENST00000551888 PARD3Q8TEW0 1356 aa23.85■■□□□ 1.41
CDK4-210ENST00000551888 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
CDK4-210ENST00000551888 DDB1Q16531 1140 aa23.84■■□□□ 1.41
CDK4-210ENST00000551888 EYA1Q99502 592 aa23.84■■□□□ 1.41
CDK4-210ENST00000551888 PKD1L3Q7Z443 1732 aa23.83■■□□□ 1.41
CDK4-210ENST00000551888 OVOS2A0A0G2JMS6 1433 aa23.83■■□□□ 1.4
CDK4-210ENST00000551888 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
CDK4-210ENST00000551888 IGSF1Q8N6C5 1336 aa23.81■■□□□ 1.4
CDK4-210ENST00000551888 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
CDK4-210ENST00000551888 MARCH10Q8NA82 808 aaPredicted RBP23.8■■□□□ 1.4
CDK4-210ENST00000551888 IL13P35225 146 aa23.79■■□□□ 1.4
CDK4-210ENST00000551888 EXOC5O00471 708 aa23.77■■□□□ 1.4
CDK4-210ENST00000551888 DOT1LQ8TEK3 1739 aa23.74■■□□□ 1.39
CDK4-210ENST00000551888 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
CDK4-210ENST00000551888 AEBP1Q8IUX7 1158 aa23.74■■□□□ 1.39
CDK4-210ENST00000551888 RAPGEF4Q8WZA2 1011 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms