RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 RGS17Q9UGC6 210 aaPredicted RBP17.78■□□□□ 0.44
RAB5C-206ENST00000550406 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
RAB5C-206ENST00000550406 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
RAB5C-206ENST00000550406 AFF2P51816 1311 aa17.77■□□□□ 0.44
RAB5C-206ENST00000550406 BTG4Q9NY30 223 aa17.76■□□□□ 0.43
RAB5C-206ENST00000550406 ABCC6O95255 1503 aa17.76■□□□□ 0.43
RAB5C-206ENST00000550406 PARD3Q8TEW0 1356 aa17.76■□□□□ 0.43
RAB5C-206ENST00000550406 IP6K1Q92551 441 aa17.75■□□□□ 0.43
RAB5C-206ENST00000550406 RGPD2P0DJD1 1756 aa17.75■□□□□ 0.43
RAB5C-206ENST00000550406 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
RAB5C-206ENST00000550406 HOXC9P31274 260 aa17.74■□□□□ 0.43
RAB5C-206ENST00000550406 USP21Q9UK80 565 aa17.73■□□□□ 0.43
RAB5C-206ENST00000550406 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
RAB5C-206ENST00000550406 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
RAB5C-206ENST00000550406 AMPHP49418 695 aa17.72■□□□□ 0.43
RAB5C-206ENST00000550406 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
RAB5C-206ENST00000550406 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
RAB5C-206ENST00000550406 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
RAB5C-206ENST00000550406 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
RAB5C-206ENST00000550406 MTHFSP49914 203 aa17.71■□□□□ 0.43
RAB5C-206ENST00000550406 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-206ENST00000550406 FLT4P35916 1363 aa17.7■□□□□ 0.42
RAB5C-206ENST00000550406 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
RAB5C-206ENST00000550406 BLMP54132 1417 aaPredicted RBP17.7■□□□□ 0.42
RAB5C-206ENST00000550406 INSRP06213 1382 aa17.69■□□□□ 0.42
RAB5C-206ENST00000550406 RALBP1Q15311 655 aa17.69■□□□□ 0.42
RAB5C-206ENST00000550406 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
RAB5C-206ENST00000550406 ATRNO75882 1429 aa17.69■□□□□ 0.42
RAB5C-206ENST00000550406 POTEAQ6S8J7 498 aa17.68■□□□□ 0.42
RAB5C-206ENST00000550406 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
RAB5C-206ENST00000550406 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
RAB5C-206ENST00000550406 STRN4Q9NRL3 753 aa17.68■□□□□ 0.42
RAB5C-206ENST00000550406 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
RAB5C-206ENST00000550406 EVA1CP58658 441 aa17.67■□□□□ 0.42
RAB5C-206ENST00000550406 VPS72Q15906 364 aa17.67■□□□□ 0.42
RAB5C-206ENST00000550406 ZNF772Q68DY9 489 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-206ENST00000550406 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-206ENST00000550406 ERBB3P21860 1342 aa17.67■□□□□ 0.42
RAB5C-206ENST00000550406 GLI3P10071 1580 aa17.66■□□□□ 0.42
RAB5C-206ENST00000550406 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
RAB5C-206ENST00000550406 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
RAB5C-206ENST00000550406 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
RAB5C-206ENST00000550406 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
RAB5C-206ENST00000550406 TRPC5Q9UL62 973 aaPredicted RBP17.65■□□□□ 0.42
RAB5C-206ENST00000550406 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
RAB5C-206ENST00000550406 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
RAB5C-206ENST00000550406 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
RAB5C-206ENST00000550406 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
RAB5C-206ENST00000550406 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
RAB5C-206ENST00000550406 MYBBP1AQ9BQG0 1328 aaKnown RBP17.63■□□□□ 0.41
RAB5C-206ENST00000550406 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
RAB5C-206ENST00000550406 CRB1P82279 1406 aa17.63■□□□□ 0.41
RAB5C-206ENST00000550406 IL13P35225 146 aa17.62■□□□□ 0.41
RAB5C-206ENST00000550406 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
RAB5C-206ENST00000550406 GJD4Q96KN9 370 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-206ENST00000550406 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
RAB5C-206ENST00000550406 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
RAB5C-206ENST00000550406 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
RAB5C-206ENST00000550406 ANP32CO43423 234 aa17.6■□□□□ 0.41
RAB5C-206ENST00000550406 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
RAB5C-206ENST00000550406 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
RAB5C-206ENST00000550406 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
RAB5C-206ENST00000550406 EYA1Q99502 592 aa17.59■□□□□ 0.41
RAB5C-206ENST00000550406 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
RAB5C-206ENST00000550406 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
RAB5C-206ENST00000550406 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
RAB5C-206ENST00000550406 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.4
RAB5C-206ENST00000550406 RBM6P78332 1123 aaKnown RBP17.58■□□□□ 0.4
RAB5C-206ENST00000550406 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
RAB5C-206ENST00000550406 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.4
RAB5C-206ENST00000550406 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
RAB5C-206ENST00000550406 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
RAB5C-206ENST00000550406 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
RAB5C-206ENST00000550406 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
RAB5C-206ENST00000550406 RXRBP28702 533 aa17.56■□□□□ 0.4
RAB5C-206ENST00000550406 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
RAB5C-206ENST00000550406 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
RAB5C-206ENST00000550406 FAM98CQ17RN3 349 aaKnown RBP17.55■□□□□ 0.4
RAB5C-206ENST00000550406 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
RAB5C-206ENST00000550406 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
RAB5C-206ENST00000550406 THRAP3Q9Y2W1 955 aaKnown RBP17.55■□□□□ 0.4
RAB5C-206ENST00000550406 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
RAB5C-206ENST00000550406 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
RAB5C-206ENST00000550406 SHANK3Q9BYB0 1731 aa17.52■□□□□ 0.4
RAB5C-206ENST00000550406 MEGF6O75095 1541 aa17.52■□□□□ 0.4
RAB5C-206ENST00000550406 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
RAB5C-206ENST00000550406 RGS12O14924 1447 aa17.51■□□□□ 0.39
RAB5C-206ENST00000550406 KDRP35968 1356 aa17.51■□□□□ 0.39
RAB5C-206ENST00000550406 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
RAB5C-206ENST00000550406 SEPT12Q8IYM1 358 aa17.5■□□□□ 0.39
RAB5C-206ENST00000550406 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
RAB5C-206ENST00000550406 HMOX1P09601 288 aa17.49■□□□□ 0.39
RAB5C-206ENST00000550406 IL2RBP14784 551 aa17.49■□□□□ 0.39
RAB5C-206ENST00000550406 MIER1Q8N108 512 aa17.49■□□□□ 0.39
RAB5C-206ENST00000550406 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
RAB5C-206ENST00000550406 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
RAB5C-206ENST00000550406 CDCA7Q9BWT1 371 aaPredicted RBP17.47■□□□□ 0.39
RAB5C-206ENST00000550406 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
RAB5C-206ENST00000550406 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
RAB5C-206ENST00000550406 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms