RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 KRTAP9-6A0A140TA67 174 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 CDC14CA4D256 554 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 CFAP99D6REC4 459 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 CELA2BP08218 269 aaPredicted RBP9.17□□□□□ -0.94
SNRPF-202ENST00000549580 AGERQ15109 404 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 SH3RF1Q7Z6J0 888 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
SNRPF-202ENST00000549580 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
SNRPF-202ENST00000549580 Q6ZVU0 165 aa9.16□□□□□ -0.94
SNRPF-202ENST00000549580 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
SNRPF-202ENST00000549580 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
SNRPF-202ENST00000549580 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
SNRPF-202ENST00000549580 CCDC116Q8IYX3 515 aa9.15□□□□□ -0.94
SNRPF-202ENST00000549580 MAP3K10Q02779 954 aa9.14□□□□□ -0.95
SNRPF-202ENST00000549580 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
SNRPF-202ENST00000549580 CBLBQ13191 982 aa9.13□□□□□ -0.95
SNRPF-202ENST00000549580 GAS6Q14393 721 aa9.13□□□□□ -0.95
SNRPF-202ENST00000549580 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
SNRPF-202ENST00000549580 Q8N3U1 123 aa9.13□□□□□ -0.95
SNRPF-202ENST00000549580 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
SNRPF-202ENST00000549580 CNTNAP5Q8WYK1 1306 aa9.12□□□□□ -0.95
SNRPF-202ENST00000549580 GJA5P36382 358 aa9.12□□□□□ -0.95
SNRPF-202ENST00000549580 GIGYF2Q6Y7W6 1299 aaKnown RBP9.12□□□□□ -0.95
SNRPF-202ENST00000549580 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
SNRPF-202ENST00000549580 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
SNRPF-202ENST00000549580 RSBN1LQ6PCB5 846 aaPredicted RBP9.11□□□□□ -0.95
SNRPF-202ENST00000549580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNRPF-202ENST00000549580 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
SNRPF-202ENST00000549580 PHF20L1A8MW92 1017 aa9.1□□□□□ -0.95
SNRPF-202ENST00000549580 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
SNRPF-202ENST00000549580 HRCP23327 699 aa9.1□□□□□ -0.95
SNRPF-202ENST00000549580 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
SNRPF-202ENST00000549580 PPP1R26Q5T8A7 1209 aaPredicted RBP9.1□□□□□ -0.95
SNRPF-202ENST00000549580 SH3BP5LQ7L8J4 393 aa9.1□□□□□ -0.95
SNRPF-202ENST00000549580 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
SNRPF-202ENST00000549580 ENAMQ9NRM1 1142 aa9.09□□□□□ -0.95
SNRPF-202ENST00000549580 GALNT6Q8NCL4 622 aa9.08□□□□□ -0.96
SNRPF-202ENST00000549580 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
SNRPF-202ENST00000549580 AMHR2Q16671 573 aa9.06□□□□□ -0.96
SNRPF-202ENST00000549580 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
SNRPF-202ENST00000549580 CUEDC1Q9NWM3 386 aaPredicted RBP9.06□□□□□ -0.96
SNRPF-202ENST00000549580 BARGINQ6ZT62 677 aa9.05□□□□□ -0.96
SNRPF-202ENST00000549580 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
SNRPF-202ENST00000549580 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
SNRPF-202ENST00000549580 ARMC2Q8NEN0 867 aa9.05□□□□□ -0.96
SNRPF-202ENST00000549580 TSC1Q92574 1164 aa9.05□□□□□ -0.96
SNRPF-202ENST00000549580 INSM2Q96T92 566 aaPredicted RBP9.05□□□□□ -0.96
SNRPF-202ENST00000549580 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
SNRPF-202ENST00000549580 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
SNRPF-202ENST00000549580 NBPF14Q5TI25 921 aa9.03□□□□□ -0.96
SNRPF-202ENST00000549580 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
SNRPF-202ENST00000549580 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
SNRPF-202ENST00000549580 ZMYND10O75800 440 aa9.02□□□□□ -0.97
SNRPF-202ENST00000549580 BAG6P46379 1132 aa9.02□□□□□ -0.97
SNRPF-202ENST00000549580 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
SNRPF-202ENST00000549580 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.97
SNRPF-202ENST00000549580 QPCTQ16769 361 aa9.01□□□□□ -0.97
SNRPF-202ENST00000549580 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
SNRPF-202ENST00000549580 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
SNRPF-202ENST00000549580 MBIPQ9NS73 344 aa9.01□□□□□ -0.97
SNRPF-202ENST00000549580 BCRP11274 1271 aa9□□□□□ -0.97
SNRPF-202ENST00000549580 RELBQ01201 579 aa9□□□□□ -0.97
SNRPF-202ENST00000549580 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
SNRPF-202ENST00000549580 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
SNRPF-202ENST00000549580 IGF1RP08069 1367 aa8.99□□□□□ -0.97
SNRPF-202ENST00000549580 FOXD4L5Q5VV16 416 aaPredicted RBP8.99□□□□□ -0.97
SNRPF-202ENST00000549580 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
SNRPF-202ENST00000549580 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
SNRPF-202ENST00000549580 KRBA1A5PL33 1030 aa8.97□□□□□ -0.97
SNRPF-202ENST00000549580 NEDD1Q8NHV4 660 aa8.97□□□□□ -0.97
SNRPF-202ENST00000549580 ACDQ96AP0 544 aa8.97□□□□□ -0.97
SNRPF-202ENST00000549580 ZNF837Q96EG3 531 aaPredicted RBP8.97□□□□□ -0.97
SNRPF-202ENST00000549580 NUTM2BA6NNL0 878 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 NUTM2EB1AL46 878 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
SNRPF-202ENST00000549580 NUTM2DQ5VT03 806 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 NUTM2AQ8IVF1 878 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 GPKOWQ92917 476 aaPredicted RBP eCLIP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 KCTD15Q96SI1 283 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
SNRPF-202ENST00000549580 FURINP09958 794 aa8.95□□□□□ -0.98
SNRPF-202ENST00000549580 DHX9Q08211 1270 aaKnown RBP8.95□□□□□ -0.98
SNRPF-202ENST00000549580 RTL5Q5HYW3 569 aaPredicted RBP8.95□□□□□ -0.98
SNRPF-202ENST00000549580 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
SNRPF-202ENST00000549580 TRIM66O15016 1216 aa8.94□□□□□ -0.98
SNRPF-202ENST00000549580 GPR25O00155 361 aa8.93□□□□□ -0.98
SNRPF-202ENST00000549580 INTS6LQ5JSJ4 861 aaKnown RBP8.93□□□□□ -0.98
SNRPF-202ENST00000549580 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
SNRPF-202ENST00000549580 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
SNRPF-202ENST00000549580 GMCL1Q96IK5 515 aa8.93□□□□□ -0.98
SNRPF-202ENST00000549580 LILRB3O75022 631 aa8.92□□□□□ -0.98
SNRPF-202ENST00000549580 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
SNRPF-202ENST00000549580 CDV3Q9UKY7 258 aaKnown RBP8.92□□□□□ -0.98
SNRPF-202ENST00000549580 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
SNRPF-202ENST00000549580 ADH1AP07327 375 aa8.9□□□□□ -0.98
SNRPF-202ENST00000549580 SNRPNP63162 240 aaKnown RBP8.9□□□□□ -0.98
SNRPF-202ENST00000549580 SLC10A4Q96EP9 437 aa8.9□□□□□ -0.98
SNRPF-202ENST00000549580 KRTAP4-12Q9BQ66 201 aa8.9□□□□□ -0.98
SNRPF-202ENST00000549580 COL8A1P27658 744 aa8.89□□□□□ -0.99
SNRPF-202ENST00000549580 DBN1Q16643 649 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms