RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
LIMS2-217ENST00000545738 HOXC9P31274 260 aa22.14■■□□□ 1.13
LIMS2-217ENST00000545738 FNBP4Q8N3X1 1017 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-217ENST00000545738 NGLY1Q96IV0 654 aa22.14■■□□□ 1.13
LIMS2-217ENST00000545738 BTG4Q9NY30 223 aa22.14■■□□□ 1.13
LIMS2-217ENST00000545738 AFF2P51816 1311 aa22.13■■□□□ 1.13
LIMS2-217ENST00000545738 COL5A2P05997 1499 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-217ENST00000545738 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
LIMS2-217ENST00000545738 RGS17Q9UGC6 210 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-217ENST00000545738 ABCC6O95255 1503 aa22.13■■□□□ 1.13
LIMS2-217ENST00000545738 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-217ENST00000545738 MTHFSP49914 203 aa22.11■■□□□ 1.13
LIMS2-217ENST00000545738 IP6K1Q92551 441 aa22.11■■□□□ 1.13
LIMS2-217ENST00000545738 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
LIMS2-217ENST00000545738 FLT4P35916 1363 aa22.11■■□□□ 1.13
LIMS2-217ENST00000545738 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
LIMS2-217ENST00000545738 AMPHP49418 695 aa22.1■■□□□ 1.13
LIMS2-217ENST00000545738 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
LIMS2-217ENST00000545738 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
LIMS2-217ENST00000545738 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
LIMS2-217ENST00000545738 RALBP1Q15311 655 aa22.09■■□□□ 1.13
LIMS2-217ENST00000545738 BLMP54132 1417 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-217ENST00000545738 ERBB3P21860 1342 aa22.08■■□□□ 1.12
LIMS2-217ENST00000545738 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.12
LIMS2-217ENST00000545738 USP21Q9UK80 565 aa22.07■■□□□ 1.12
LIMS2-217ENST00000545738 INSRP06213 1382 aa22.07■■□□□ 1.12
LIMS2-217ENST00000545738 DIEXFQ68CQ4 756 aaKnown RBP22.06■■□□□ 1.12
LIMS2-217ENST00000545738 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
LIMS2-217ENST00000545738 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
LIMS2-217ENST00000545738 UNC5CLQ8IV45 518 aa22.06■■□□□ 1.12
LIMS2-217ENST00000545738 LTV1Q96GA3 475 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-217ENST00000545738 ANKRD24Q8TF21 1146 aa22.05■■□□□ 1.12
LIMS2-217ENST00000545738 MYBBP1AQ9BQG0 1328 aaKnown RBP22.04■■□□□ 1.12
LIMS2-217ENST00000545738 ATRNO75882 1429 aa22.03■■□□□ 1.12
LIMS2-217ENST00000545738 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
LIMS2-217ENST00000545738 CCDC184Q52MB2 194 aa22.03■■□□□ 1.12
LIMS2-217ENST00000545738 WDR17Q8IZU2 1322 aa22.02■■□□□ 1.12
LIMS2-217ENST00000545738 GLI3P10071 1580 aa22.02■■□□□ 1.12
LIMS2-217ENST00000545738 ANP32CO43423 234 aa22.01■■□□□ 1.11
LIMS2-217ENST00000545738 FAM208AQ9UK61 1670 aaKnown RBP22.01■■□□□ 1.11
LIMS2-217ENST00000545738 RGPD1P0DJD0 1748 aa22.01■■□□□ 1.11
LIMS2-217ENST00000545738 POTEAQ6S8J7 498 aa22■■□□□ 1.11
LIMS2-217ENST00000545738 IL13P35225 146 aa21.99■■□□□ 1.11
LIMS2-217ENST00000545738 CRB1P82279 1406 aa21.99■■□□□ 1.11
LIMS2-217ENST00000545738 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
LIMS2-217ENST00000545738 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
LIMS2-217ENST00000545738 EVA1CP58658 441 aa21.98■■□□□ 1.11
LIMS2-217ENST00000545738 VPS72Q15906 364 aa21.98■■□□□ 1.11
LIMS2-217ENST00000545738 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
LIMS2-217ENST00000545738 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
LIMS2-217ENST00000545738 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
LIMS2-217ENST00000545738 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
LIMS2-217ENST00000545738 SPATA31A1Q5TZJ5 1347 aa21.97■■□□□ 1.11
LIMS2-217ENST00000545738 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
LIMS2-217ENST00000545738 QTRT2Q9H974 415 aaKnown RBP21.97■■□□□ 1.11
LIMS2-217ENST00000545738 CSB-PGBD3P0DP91 1061 aa21.96■■□□□ 1.11
LIMS2-217ENST00000545738 TOM1L2Q6ZVM7 507 aa21.96■■□□□ 1.11
LIMS2-217ENST00000545738 EYA1Q99502 592 aa21.96■■□□□ 1.11
LIMS2-217ENST00000545738 ZNF772Q68DY9 489 aaPredicted RBP21.95■■□□□ 1.1
LIMS2-217ENST00000545738 TRPC5Q9UL62 973 aaPredicted RBP21.95■■□□□ 1.1
LIMS2-217ENST00000545738 EP400Q96L91 3159 aa21.95■■□□□ 1.1
LIMS2-217ENST00000545738 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
LIMS2-217ENST00000545738 WNK3Q9BYP7 1800 aa21.95■■□□□ 1.1
LIMS2-217ENST00000545738 NLRP2Q9NX02 1062 aa21.94■■□□□ 1.1
LIMS2-217ENST00000545738 GJD4Q96KN9 370 aaPredicted RBP21.94■■□□□ 1.1
LIMS2-217ENST00000545738 MIER1Q8N108 512 aa21.93■■□□□ 1.1
LIMS2-217ENST00000545738 CARD10Q9BWT7 1032 aa21.93■■□□□ 1.1
LIMS2-217ENST00000545738 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
LIMS2-217ENST00000545738 DIAPH1O60610 1272 aaKnown RBP21.92■■□□□ 1.1
LIMS2-217ENST00000545738 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
LIMS2-217ENST00000545738 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
LIMS2-217ENST00000545738 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
LIMS2-217ENST00000545738 MEGF6O75095 1541 aa21.9■■□□□ 1.1
LIMS2-217ENST00000545738 THSD7AQ9UPZ6 1657 aa21.9■■□□□ 1.1
LIMS2-217ENST00000545738 CFAP53Q96M91 514 aa21.89■■□□□ 1.1
LIMS2-217ENST00000545738 FAM98CQ17RN3 349 aaKnown RBP21.89■■□□□ 1.09
LIMS2-217ENST00000545738 TCP11L2Q8N4U5 519 aa21.89■■□□□ 1.09
LIMS2-217ENST00000545738 KDRP35968 1356 aa21.87■■□□□ 1.09
LIMS2-217ENST00000545738 HMOX1P09601 288 aa21.86■■□□□ 1.09
LIMS2-217ENST00000545738 LRRC37A3O60309 1634 aa21.86■■□□□ 1.09
LIMS2-217ENST00000545738 U2SURPO15042 1029 aaKnown RBP21.86■■□□□ 1.09
LIMS2-217ENST00000545738 RBM6P78332 1123 aaKnown RBP21.86■■□□□ 1.09
LIMS2-217ENST00000545738 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
LIMS2-217ENST00000545738 RGS12O14924 1447 aa21.85■■□□□ 1.09
LIMS2-217ENST00000545738 BARGINQ6ZT62 677 aa21.85■■□□□ 1.09
LIMS2-217ENST00000545738 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
LIMS2-217ENST00000545738 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
LIMS2-217ENST00000545738 ONECUT3O60422 494 aaPredicted RBP21.84■■□□□ 1.09
LIMS2-217ENST00000545738 BRWD3Q6RI45 1802 aa21.84■■□□□ 1.09
LIMS2-217ENST00000545738 MRS2Q9HD23 443 aa21.83■■□□□ 1.09
LIMS2-217ENST00000545738 THRAP3Q9Y2W1 955 aaKnown RBP21.83■■□□□ 1.09
LIMS2-217ENST00000545738 RXRBP28702 533 aa21.83■■□□□ 1.08
LIMS2-217ENST00000545738 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-217ENST00000545738 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
LIMS2-217ENST00000545738 RSPH6AQ9H0K4 717 aa21.81■■□□□ 1.08
LIMS2-217ENST00000545738 OVOS2A0A0G2JMS6 1433 aa21.81■■□□□ 1.08
LIMS2-217ENST00000545738 IL2RBP14784 551 aa21.8■■□□□ 1.08
LIMS2-217ENST00000545738 PKD1L3Q7Z443 1732 aa21.8■■□□□ 1.08
LIMS2-217ENST00000545738 PNISRQ8TF01 805 aaKnown RBP21.8■■□□□ 1.08
LIMS2-217ENST00000545738 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms