RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 AMPHP49418 695 aa28.18■■■□□ 2.1
OTUB1-211ENST00000543004 MTHFSP49914 203 aa28.18■■■□□ 2.1
OTUB1-211ENST00000543004 HOXC9P31274 260 aa28.16■■■□□ 2.1
OTUB1-211ENST00000543004 NGLY1Q96IV0 654 aa28.16■■■□□ 2.1
OTUB1-211ENST00000543004 SMG6Q86US8 1419 aaKnown RBP28.16■■■□□ 2.1
OTUB1-211ENST00000543004 HSP90AB2PQ58FF8 381 aa28.15■■■□□ 2.1
OTUB1-211ENST00000543004 IP6K1Q92551 441 aa28.14■■■□□ 2.1
OTUB1-211ENST00000543004 BTG4Q9NY30 223 aa28.14■■■□□ 2.1
OTUB1-211ENST00000543004 FLT4P35916 1363 aa28.13■■■□□ 2.09
OTUB1-211ENST00000543004 MYBBP1AQ9BQG0 1328 aaKnown RBP28.12■■■□□ 2.09
OTUB1-211ENST00000543004 SLIT2O94813 1529 aa28.12■■■□□ 2.09
OTUB1-211ENST00000543004 NRAPQ86VF7 1730 aa28.12■■■□□ 2.09
OTUB1-211ENST00000543004 NWD2Q9ULI1 1742 aa28.12■■■□□ 2.09
OTUB1-211ENST00000543004 RTL1A6NKG5 1358 aa28.11■■■□□ 2.09
OTUB1-211ENST00000543004 CDK12Q9NYV4 1490 aaPredicted RBP28.1■■■□□ 2.09
OTUB1-211ENST00000543004 LTV1Q96GA3 475 aaPredicted RBP28.1■■■□□ 2.09
OTUB1-211ENST00000543004 ABCC6O95255 1503 aa28.1■■■□□ 2.09
OTUB1-211ENST00000543004 RGPD2P0DJD1 1756 aa28.09■■■□□ 2.09
OTUB1-211ENST00000543004 AFF2P51816 1311 aa28.09■■■□□ 2.09
OTUB1-211ENST00000543004 COL5A2P05997 1499 aaPredicted RBP28.09■■■□□ 2.09
OTUB1-211ENST00000543004 KIF24Q5T7B8 1368 aa28.08■■■□□ 2.09
OTUB1-211ENST00000543004 FNBP4Q8N3X1 1017 aaPredicted RBP28.08■■■□□ 2.09
OTUB1-211ENST00000543004 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
OTUB1-211ENST00000543004 STRN4Q9NRL3 753 aa28.07■■■□□ 2.08
OTUB1-211ENST00000543004 INSRP06213 1382 aa28.07■■■□□ 2.08
OTUB1-211ENST00000543004 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
OTUB1-211ENST00000543004 CCDC184Q52MB2 194 aa28.06■■■□□ 2.08
OTUB1-211ENST00000543004 ANKRD24Q8TF21 1146 aa28.06■■■□□ 2.08
OTUB1-211ENST00000543004 COL3A1P02461 1466 aaPredicted RBP28.05■■■□□ 2.08
OTUB1-211ENST00000543004 USP21Q9UK80 565 aa28.04■■■□□ 2.08
OTUB1-211ENST00000543004 ERBB3P21860 1342 aa28.04■■■□□ 2.08
OTUB1-211ENST00000543004 MIER1Q8N108 512 aa28.03■■■□□ 2.08
OTUB1-211ENST00000543004 EVA1CP58658 441 aa28.03■■■□□ 2.08
OTUB1-211ENST00000543004 EIF4A2Q14240 407 aaKnown RBP28.03■■■□□ 2.08
OTUB1-211ENST00000543004 LARP1Q6PKG0 1096 aaKnown RBP28.03■■■□□ 2.08
OTUB1-211ENST00000543004 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.02■■■□□ 2.08
OTUB1-211ENST00000543004 UNC5CLQ8IV45 518 aa28.02■■■□□ 2.08
OTUB1-211ENST00000543004 CSB-PGBD3P0DP91 1061 aa28■■■□□ 2.07
OTUB1-211ENST00000543004 WDR17Q8IZU2 1322 aa27.99■■■□□ 2.07
OTUB1-211ENST00000543004 IL13P35225 146 aa27.98■■■□□ 2.07
OTUB1-211ENST00000543004 RGS17Q9UGC6 210 aaPredicted RBP27.98■■■□□ 2.07
OTUB1-211ENST00000543004 CFAP53Q96M91 514 aa27.97■■■□□ 2.07
OTUB1-211ENST00000543004 DIAPH1O60610 1272 aaKnown RBP27.96■■■□□ 2.07
OTUB1-211ENST00000543004 FAM208AQ9UK61 1670 aaKnown RBP27.96■■■□□ 2.07
OTUB1-211ENST00000543004 NBPF6Q5VWK0 638 aa27.96■■■□□ 2.07
OTUB1-211ENST00000543004 TOM1L2Q6ZVM7 507 aa27.96■■■□□ 2.07
OTUB1-211ENST00000543004 NBPF4Q96M43 638 aa27.96■■■□□ 2.07
OTUB1-211ENST00000543004 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.07
OTUB1-211ENST00000543004 USHBP1Q8N6Y0 703 aa27.95■■■□□ 2.06
OTUB1-211ENST00000543004 NLRP2Q9NX02 1062 aa27.95■■■□□ 2.06
OTUB1-211ENST00000543004 USP35Q9P2H5 1018 aa27.95■■■□□ 2.06
OTUB1-211ENST00000543004 CRB1P82279 1406 aa27.94■■■□□ 2.06
OTUB1-211ENST00000543004 EYA1Q99502 592 aa27.94■■■□□ 2.06
OTUB1-211ENST00000543004 PHF23Q9BUL5 403 aaPredicted RBP27.93■■■□□ 2.06
OTUB1-211ENST00000543004 CCDC9Q9Y3X0 531 aaKnown RBP27.93■■■□□ 2.06
OTUB1-211ENST00000543004 ATRNO75882 1429 aa27.92■■■□□ 2.06
OTUB1-211ENST00000543004 VPS72Q15906 364 aa27.92■■■□□ 2.06
OTUB1-211ENST00000543004 QTRT2Q9H974 415 aaKnown RBP27.92■■■□□ 2.06
OTUB1-211ENST00000543004 MRS2Q9HD23 443 aa27.91■■■□□ 2.06
OTUB1-211ENST00000543004 U2SURPO15042 1029 aaKnown RBP27.9■■■□□ 2.06
OTUB1-211ENST00000543004 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
OTUB1-211ENST00000543004 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
OTUB1-211ENST00000543004 GLI3P10071 1580 aa27.9■■■□□ 2.06
OTUB1-211ENST00000543004 ZNF772Q68DY9 489 aaPredicted RBP27.89■■■□□ 2.06
OTUB1-211ENST00000543004 TRPC5Q9UL62 973 aaPredicted RBP27.89■■■□□ 2.06
OTUB1-211ENST00000543004 SPATA31A1Q5TZJ5 1347 aa27.89■■■□□ 2.06
OTUB1-211ENST00000543004 CARD10Q9BWT7 1032 aa27.89■■■□□ 2.05
OTUB1-211ENST00000543004 AEBP1Q8IUX7 1158 aa27.88■■■□□ 2.05
OTUB1-211ENST00000543004 IGSF1Q8N6C5 1336 aa27.87■■■□□ 2.05
OTUB1-211ENST00000543004 HMOX1P09601 288 aa27.86■■■□□ 2.05
OTUB1-211ENST00000543004 POTEAQ6S8J7 498 aa27.86■■■□□ 2.05
OTUB1-211ENST00000543004 GJD4Q96KN9 370 aaPredicted RBP27.85■■■□□ 2.05
OTUB1-211ENST00000543004 WNK3Q9BYP7 1800 aa27.85■■■□□ 2.05
OTUB1-211ENST00000543004 SULT6B1Q6IMI4 303 aa27.85■■■□□ 2.05
OTUB1-211ENST00000543004 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
OTUB1-211ENST00000543004 NUDCQ9Y266 331 aa27.84■■■□□ 2.05
OTUB1-211ENST00000543004 U2AF1L5P0DN76 240 aaPredicted RBP27.83■■■□□ 2.05
OTUB1-211ENST00000543004 U2AF1Q01081 240 aaKnown RBP eCLIP27.83■■■□□ 2.05
OTUB1-211ENST00000543004 TCP11L2Q8N4U5 519 aa27.82■■■□□ 2.04
OTUB1-211ENST00000543004 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
OTUB1-211ENST00000543004 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
OTUB1-211ENST00000543004 PNISRQ8TF01 805 aaKnown RBP27.8■■■□□ 2.04
OTUB1-211ENST00000543004 MEGF6O75095 1541 aa27.79■■■□□ 2.04
OTUB1-211ENST00000543004 KDRP35968 1356 aa27.79■■■□□ 2.04
OTUB1-211ENST00000543004 ADAMTS8Q9UP79 889 aa27.78■■■□□ 2.04
OTUB1-211ENST00000543004 DISP2A7MBM2 1401 aa27.77■■■□□ 2.04
OTUB1-211ENST00000543004 WDR43Q15061 677 aaKnown RBP eCLIP27.77■■■□□ 2.04
OTUB1-211ENST00000543004 THRAP3Q9Y2W1 955 aaKnown RBP27.77■■■□□ 2.04
OTUB1-211ENST00000543004 RBM6P78332 1123 aaKnown RBP27.76■■■□□ 2.03
OTUB1-211ENST00000543004 BARGINQ6ZT62 677 aa27.75■■■□□ 2.03
OTUB1-211ENST00000543004 RSPH6AQ9H0K4 717 aa27.75■■■□□ 2.03
OTUB1-211ENST00000543004 PARP4Q9UKK3 1724 aaKnown RBP27.75■■■□□ 2.03
OTUB1-211ENST00000543004 IL2RBP14784 551 aa27.74■■■□□ 2.03
OTUB1-211ENST00000543004 THSD7AQ9UPZ6 1657 aa27.74■■■□□ 2.03
OTUB1-211ENST00000543004 RXRBP28702 533 aa27.74■■■□□ 2.03
OTUB1-211ENST00000543004 FAM9BQ8IZU0 186 aa27.74■■■□□ 2.03
OTUB1-211ENST00000543004 RAPGEF4Q8WZA2 1011 aa27.73■■■□□ 2.03
OTUB1-211ENST00000543004 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
OTUB1-211ENST00000543004 LRRC37A3O60309 1634 aa27.72■■■□□ 2.03
OTUB1-211ENST00000543004 A0A0G2JS52 829 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms