RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
LEMD3-204ENST00000542032 MPNDQ8N594 471 aa8.44□□□□□ -1.06
LEMD3-204ENST00000542032 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
LEMD3-204ENST00000542032 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
LEMD3-204ENST00000542032 LRRN4Q8WUT4 740 aa8.43□□□□□ -1.06
LEMD3-204ENST00000542032 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
LEMD3-204ENST00000542032 KRTAP9-9Q9BYP9 154 aa8.43□□□□□ -1.06
LEMD3-204ENST00000542032 KRTAP9-4Q9BYQ2 154 aa8.43□□□□□ -1.06
LEMD3-204ENST00000542032 MARSP56192 900 aaKnown RBP8.42□□□□□ -1.06
LEMD3-204ENST00000542032 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
LEMD3-204ENST00000542032 SH3RF1Q7Z6J0 888 aa8.42□□□□□ -1.06
LEMD3-204ENST00000542032 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
LEMD3-204ENST00000542032 KRTAP4-12Q9BQ66 201 aa8.42□□□□□ -1.06
LEMD3-204ENST00000542032 SCARF1Q14162 830 aa8.41□□□□□ -1.06
LEMD3-204ENST00000542032 PLA2G4EQ3MJ16 856 aa8.41□□□□□ -1.06
LEMD3-204ENST00000542032 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
LEMD3-204ENST00000542032 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
LEMD3-204ENST00000542032 AP1G2O75843 785 aa8.4□□□□□ -1.06
LEMD3-204ENST00000542032 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
LEMD3-204ENST00000542032 SH3BP5LQ7L8J4 393 aa8.4□□□□□ -1.06
LEMD3-204ENST00000542032 WHAMMQ8TF30 809 aa8.4□□□□□ -1.06
LEMD3-204ENST00000542032 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.06
LEMD3-204ENST00000542032 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
LEMD3-204ENST00000542032 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
LEMD3-204ENST00000542032 NBPF14Q5TI25 921 aa8.39□□□□□ -1.07
LEMD3-204ENST00000542032 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
LEMD3-204ENST00000542032 BTBD11A6QL63 1104 aa8.38□□□□□ -1.07
LEMD3-204ENST00000542032 K7ELQ4 463 aaPredicted RBP8.38□□□□□ -1.07
LEMD3-204ENST00000542032 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
LEMD3-204ENST00000542032 NR6A1Q15406 480 aa8.38□□□□□ -1.07
LEMD3-204ENST00000542032 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
LEMD3-204ENST00000542032 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
LEMD3-204ENST00000542032 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
LEMD3-204ENST00000542032 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
LEMD3-204ENST00000542032 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
LEMD3-204ENST00000542032 MAN1A2O60476 641 aa8.37□□□□□ -1.07
LEMD3-204ENST00000542032 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
LEMD3-204ENST00000542032 ZC3H4Q9UPT8 1303 aaKnown RBP8.36□□□□□ -1.07
LEMD3-204ENST00000542032 PDXDC2PQ6P474 469 aa8.36□□□□□ -1.07
LEMD3-204ENST00000542032 GALNT6Q8NCL4 622 aa8.36□□□□□ -1.07
LEMD3-204ENST00000542032 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
LEMD3-204ENST00000542032 FKBPLQ9UIM3 349 aa8.36□□□□□ -1.07
LEMD3-204ENST00000542032 TLL2Q9Y6L7 1015 aa8.36□□□□□ -1.07
LEMD3-204ENST00000542032 ITGB2P05107 769 aa8.35□□□□□ -1.07
LEMD3-204ENST00000542032 TRMT44Q8IYL2 757 aaKnown RBP8.35□□□□□ -1.07
LEMD3-204ENST00000542032 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
LEMD3-204ENST00000542032 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
LEMD3-204ENST00000542032 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
LEMD3-204ENST00000542032 SOCS7O14512 581 aa8.34□□□□□ -1.07
LEMD3-204ENST00000542032 PROCP04070 461 aa8.34□□□□□ -1.07
LEMD3-204ENST00000542032 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
LEMD3-204ENST00000542032 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
LEMD3-204ENST00000542032 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
LEMD3-204ENST00000542032 ADH1CP00326 375 aa8.32□□□□□ -1.08
LEMD3-204ENST00000542032 AGERQ15109 404 aa8.32□□□□□ -1.08
LEMD3-204ENST00000542032 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
LEMD3-204ENST00000542032 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
LEMD3-204ENST00000542032 GRM5P41594 1212 aa8.31□□□□□ -1.08
LEMD3-204ENST00000542032 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
LEMD3-204ENST00000542032 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
LEMD3-204ENST00000542032 KLF16Q9BXK1 252 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-204ENST00000542032 NNTQ13423 1086 aa8.3□□□□□ -1.08
LEMD3-204ENST00000542032 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
LEMD3-204ENST00000542032 MAGEB6P1A0A0J9YX57 407 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 PTK2Q05397 1052 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 NR5A1Q13285 461 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 MTMR14Q8NCE2 650 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
LEMD3-204ENST00000542032 GPR37L1O60883 481 aa8.27□□□□□ -1.09
LEMD3-204ENST00000542032 NR3C2P08235 984 aa8.27□□□□□ -1.09
LEMD3-204ENST00000542032 TIMP2P16035 220 aa8.27□□□□□ -1.09
LEMD3-204ENST00000542032 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
LEMD3-204ENST00000542032 SLURP2P0DP57 97 aa8.26□□□□□ -1.09
LEMD3-204ENST00000542032 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
LEMD3-204ENST00000542032 CARD14Q9BXL6 1004 aa8.26□□□□□ -1.09
LEMD3-204ENST00000542032 SNRKQ9NRH2 765 aa8.26□□□□□ -1.09
LEMD3-204ENST00000542032 ARID5BQ14865 1188 aa8.25□□□□□ -1.09
LEMD3-204ENST00000542032 ADAM32Q8TC27 787 aa8.25□□□□□ -1.09
LEMD3-204ENST00000542032 VASH1Q7L8A9 365 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-204ENST00000542032 CDV3Q9UKY7 258 aaKnown RBP8.24□□□□□ -1.09
LEMD3-204ENST00000542032 FSHRP23945 695 aa8.23□□□□□ -1.09
LEMD3-204ENST00000542032 ZBTB33Q86T24 672 aa8.23□□□□□ -1.09
LEMD3-204ENST00000542032 ZBBXA8MT70 800 aa8.21□□□□□ -1.1
LEMD3-204ENST00000542032 FURINP09958 794 aa8.21□□□□□ -1.1
LEMD3-204ENST00000542032 BAG6P46379 1132 aa8.21□□□□□ -1.1
LEMD3-204ENST00000542032 ITPKCQ96DU7 683 aa8.21□□□□□ -1.1
LEMD3-204ENST00000542032 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.1
LEMD3-204ENST00000542032 KCTD15Q96SI1 283 aaPredicted RBP8.21□□□□□ -1.1
LEMD3-204ENST00000542032 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
LEMD3-204ENST00000542032 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
LEMD3-204ENST00000542032 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
LEMD3-204ENST00000542032 DNMT3LQ9UJW3 386 aa8.2□□□□□ -1.1
LEMD3-204ENST00000542032 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
LEMD3-204ENST00000542032 APBB1O00213 710 aa8.19□□□□□ -1.1
LEMD3-204ENST00000542032 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
LEMD3-204ENST00000542032 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
LEMD3-204ENST00000542032 CNTNAP5Q8WYK1 1306 aa8.19□□□□□ -1.1
LEMD3-204ENST00000542032 ESPNB1AK53 854 aa8.18□□□□□ -1.1
LEMD3-204ENST00000542032 MAP3K10Q02779 954 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms