RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CHRNA2Q15822 529 aa31.69■■■□□ 2.66
TMEM260-202ENST00000538838 PRDM11Q9NQV5 511 aa31.69■■■□□ 2.66
TMEM260-202ENST00000538838 KIF24Q5T7B8 1368 aa31.68■■■□□ 2.66
TMEM260-202ENST00000538838 ADAMTS2O95450 1211 aa31.68■■■□□ 2.66
TMEM260-202ENST00000538838 COL3A1P02461 1466 aaPredicted RBP31.68■■■□□ 2.66
TMEM260-202ENST00000538838 HOXC9P31274 260 aa31.67■■■□□ 2.66
TMEM260-202ENST00000538838 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
TMEM260-202ENST00000538838 IP6K1Q92551 441 aa31.64■■■□□ 2.65
TMEM260-202ENST00000538838 HSP90AB2PQ58FF8 381 aa31.63■■■□□ 2.65
TMEM260-202ENST00000538838 CAMTA1Q9Y6Y1 1673 aa31.62■■■□□ 2.65
TMEM260-202ENST00000538838 FAM83GA6ND36 823 aa31.62■■■□□ 2.65
TMEM260-202ENST00000538838 BLMP54132 1417 aaPredicted RBP31.62■■■□□ 2.65
TMEM260-202ENST00000538838 INSRP06213 1382 aa31.61■■■□□ 2.65
TMEM260-202ENST00000538838 CFAP53Q96M91 514 aa31.61■■■□□ 2.65
TMEM260-202ENST00000538838 AXIN2Q9Y2T1 843 aa31.61■■■□□ 2.65
TMEM260-202ENST00000538838 MRS2Q9HD23 443 aa31.6■■■□□ 2.65
TMEM260-202ENST00000538838 NRAPQ86VF7 1730 aa31.59■■■□□ 2.65
TMEM260-202ENST00000538838 NWD2Q9ULI1 1742 aa31.59■■■□□ 2.65
TMEM260-202ENST00000538838 RGPD2P0DJD1 1756 aa31.59■■■□□ 2.65
TMEM260-202ENST00000538838 CCER2I3L3R5 266 aa31.59■■■□□ 2.65
TMEM260-202ENST00000538838 FAM208AQ9UK61 1670 aaKnown RBP31.56■■■□□ 2.64
TMEM260-202ENST00000538838 COL5A2P05997 1499 aaPredicted RBP31.56■■■□□ 2.64
TMEM260-202ENST00000538838 LTV1Q96GA3 475 aaPredicted RBP31.55■■■□□ 2.64
TMEM260-202ENST00000538838 RGPD1P0DJD0 1748 aa31.55■■■□□ 2.64
TMEM260-202ENST00000538838 EIF4A2Q14240 407 aaKnown RBP31.54■■■□□ 2.64
TMEM260-202ENST00000538838 MEX3CQ5U5Q3 659 aaKnown RBP31.54■■■□□ 2.64
TMEM260-202ENST00000538838 C8orf37Q96NL8 207 aa31.54■■■□□ 2.64
TMEM260-202ENST00000538838 SLIT2O94813 1529 aa31.53■■■□□ 2.64
TMEM260-202ENST00000538838 DIAPH1O60610 1272 aaKnown RBP31.53■■■□□ 2.64
TMEM260-202ENST00000538838 BTG4Q9NY30 223 aa31.53■■■□□ 2.64
TMEM260-202ENST00000538838 ERBB3P21860 1342 aa31.52■■■□□ 2.64
TMEM260-202ENST00000538838 ANKRD24Q8TF21 1146 aa31.52■■■□□ 2.64
TMEM260-202ENST00000538838 ILDR1Q86SU0 546 aaPredicted RBP31.51■■■□□ 2.63
TMEM260-202ENST00000538838 IL13P35225 146 aa31.5■■■□□ 2.63
TMEM260-202ENST00000538838 NGLY1Q96IV0 654 aa31.49■■■□□ 2.63
TMEM260-202ENST00000538838 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.48■■■□□ 2.63
TMEM260-202ENST00000538838 STRN4Q9NRL3 753 aa31.46■■■□□ 2.63
TMEM260-202ENST00000538838 U2SURPO15042 1029 aaKnown RBP31.45■■■□□ 2.62
TMEM260-202ENST00000538838 CSB-PGBD3P0DP91 1061 aa31.45■■■□□ 2.62
TMEM260-202ENST00000538838 WDR17Q8IZU2 1322 aa31.44■■■□□ 2.62
TMEM260-202ENST00000538838 NUDCQ9Y266 331 aa31.43■■■□□ 2.62
TMEM260-202ENST00000538838 BCL9LQ86UU0 1499 aa31.43■■■□□ 2.62
TMEM260-202ENST00000538838 EVA1CP58658 441 aa31.42■■■□□ 2.62
TMEM260-202ENST00000538838 PNISRQ8TF01 805 aaKnown RBP31.42■■■□□ 2.62
TMEM260-202ENST00000538838 WDR43Q15061 677 aaKnown RBP eCLIP31.42■■■□□ 2.62
TMEM260-202ENST00000538838 FNBP4Q8N3X1 1017 aaPredicted RBP31.42■■■□□ 2.62
TMEM260-202ENST00000538838 EYA1Q99502 592 aa31.42■■■□□ 2.62
TMEM260-202ENST00000538838 AFF2P51816 1311 aa31.41■■■□□ 2.62
TMEM260-202ENST00000538838 IGSF1Q8N6C5 1336 aa31.4■■■□□ 2.62
TMEM260-202ENST00000538838 NBPF6Q5VWK0 638 aa31.4■■■□□ 2.62
TMEM260-202ENST00000538838 LARP1Q6PKG0 1096 aaKnown RBP31.4■■■□□ 2.62
TMEM260-202ENST00000538838 NBPF4Q96M43 638 aa31.4■■■□□ 2.62
TMEM260-202ENST00000538838 CRB1P82279 1406 aa31.39■■■□□ 2.62
TMEM260-202ENST00000538838 U2AF1L5P0DN76 240 aaPredicted RBP31.38■■■□□ 2.61
TMEM260-202ENST00000538838 U2AF1Q01081 240 aaKnown RBP eCLIP31.38■■■□□ 2.61
TMEM260-202ENST00000538838 USHBP1Q8N6Y0 703 aa31.38■■■□□ 2.61
TMEM260-202ENST00000538838 NLRP2Q9NX02 1062 aa31.38■■■□□ 2.61
TMEM260-202ENST00000538838 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
TMEM260-202ENST00000538838 TOM1L2Q6ZVM7 507 aa31.37■■■□□ 2.61
TMEM260-202ENST00000538838 UNC5CLQ8IV45 518 aa31.37■■■□□ 2.61
TMEM260-202ENST00000538838 FAM9BQ8IZU0 186 aa31.37■■■□□ 2.61
TMEM260-202ENST00000538838 USP21Q9UK80 565 aa31.37■■■□□ 2.61
TMEM260-202ENST00000538838 WNK3Q9BYP7 1800 aa31.37■■■□□ 2.61
TMEM260-202ENST00000538838 HMOX1P09601 288 aa31.35■■■□□ 2.61
TMEM260-202ENST00000538838 AEBP1Q8IUX7 1158 aa31.35■■■□□ 2.61
TMEM260-202ENST00000538838 ADAMTS8Q9UP79 889 aa31.35■■■□□ 2.61
TMEM260-202ENST00000538838 SULT6B1Q6IMI4 303 aa31.33■■■□□ 2.61
TMEM260-202ENST00000538838 KDRP35968 1356 aa31.33■■■□□ 2.61
TMEM260-202ENST00000538838 CARD10Q9BWT7 1032 aa31.31■■■□□ 2.6
TMEM260-202ENST00000538838 USP35Q9P2H5 1018 aa31.3■■■□□ 2.6
TMEM260-202ENST00000538838 RSPH6AQ9H0K4 717 aa31.29■■■□□ 2.6
TMEM260-202ENST00000538838 PARP4Q9UKK3 1724 aaKnown RBP31.29■■■□□ 2.6
TMEM260-202ENST00000538838 ATRNO75882 1429 aa31.28■■■□□ 2.6
TMEM260-202ENST00000538838 VPS72Q15906 364 aa31.27■■■□□ 2.6
TMEM260-202ENST00000538838 CCDC9Q9Y3X0 531 aaKnown RBP31.27■■■□□ 2.6
TMEM260-202ENST00000538838 SPATA31A1Q5TZJ5 1347 aa31.27■■■□□ 2.6
TMEM260-202ENST00000538838 SPATA31A5Q5VU36 1347 aa31.27■■■□□ 2.6
TMEM260-202ENST00000538838 SPATA31A7Q8IWB4 1347 aa31.27■■■□□ 2.6
TMEM260-202ENST00000538838 MEGF6O75095 1541 aa31.26■■■□□ 2.59
TMEM260-202ENST00000538838 GLI3P10071 1580 aa31.26■■■□□ 2.59
TMEM260-202ENST00000538838 PRKAR2BP31323 418 aa31.25■■■□□ 2.59
TMEM260-202ENST00000538838 FCHSD2O94868 740 aa31.24■■■□□ 2.59
TMEM260-202ENST00000538838 CCDC146Q8IYE0 955 aa31.24■■■□□ 2.59
TMEM260-202ENST00000538838 TRPC5Q9UL62 973 aaPredicted RBP31.22■■■□□ 2.59
TMEM260-202ENST00000538838 PKD1L3Q7Z443 1732 aa31.21■■■□□ 2.59
TMEM260-202ENST00000538838 TCP11L2Q8N4U5 519 aa31.2■■■□□ 2.59
TMEM260-202ENST00000538838 PLEKHF1Q96S99 279 aa31.2■■■□□ 2.59
TMEM260-202ENST00000538838 DISP2A7MBM2 1401 aa31.2■■■□□ 2.58
TMEM260-202ENST00000538838 ZNF772Q68DY9 489 aaPredicted RBP31.19■■■□□ 2.58
TMEM260-202ENST00000538838 RAPGEF4Q8WZA2 1011 aa31.19■■■□□ 2.58
TMEM260-202ENST00000538838 SHANK3Q9BYB0 1731 aa31.18■■■□□ 2.58
TMEM260-202ENST00000538838 QTRT2Q9H974 415 aaKnown RBP31.17■■■□□ 2.58
TMEM260-202ENST00000538838 THRAP3Q9Y2W1 955 aaKnown RBP31.17■■■□□ 2.58
TMEM260-202ENST00000538838 OVOS2A0A0G2JMS6 1433 aa31.17■■■□□ 2.58
TMEM260-202ENST00000538838 RUNDC1Q96C34 613 aa31.16■■■□□ 2.58
TMEM260-202ENST00000538838 LRRC37A3O60309 1634 aa31.16■■■□□ 2.58
TMEM260-202ENST00000538838 IL2RBP14784 551 aa31.16■■■□□ 2.58
TMEM260-202ENST00000538838 GJD4Q96KN9 370 aaPredicted RBP31.16■■■□□ 2.58
TMEM260-202ENST00000538838 PHACTR3Q96KR7 559 aa31.16■■■□□ 2.58
TMEM260-202ENST00000538838 PHF23Q9BUL5 403 aaPredicted RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms