RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CDK12Q9NYV4 1490 aaPredicted RBP23.27■■□□□ 1.32
CLN6-202ENST00000538696 PRDM11Q9NQV5 511 aa23.27■■□□□ 1.32
CLN6-202ENST00000538696 CHRNA2Q15822 529 aa23.26■■□□□ 1.31
CLN6-202ENST00000538696 KIF24Q5T7B8 1368 aa23.25■■□□□ 1.31
CLN6-202ENST00000538696 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
CLN6-202ENST00000538696 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
CLN6-202ENST00000538696 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
CLN6-202ENST00000538696 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
CLN6-202ENST00000538696 FLT4P35916 1363 aa23.24■■□□□ 1.31
CLN6-202ENST00000538696 HOXC9P31274 260 aa23.23■■□□□ 1.31
CLN6-202ENST00000538696 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.23■■□□□ 1.31
CLN6-202ENST00000538696 SLIT2O94813 1529 aa23.23■■□□□ 1.31
CLN6-202ENST00000538696 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
CLN6-202ENST00000538696 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
CLN6-202ENST00000538696 AMPHP49418 695 aa23.22■■□□□ 1.31
CLN6-202ENST00000538696 MTHFSP49914 203 aa23.22■■□□□ 1.31
CLN6-202ENST00000538696 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
CLN6-202ENST00000538696 RGPD2P0DJD1 1756 aa23.21■■□□□ 1.31
CLN6-202ENST00000538696 PPM1GO15355 546 aaPredicted RBP23.21■■□□□ 1.31
CLN6-202ENST00000538696 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
CLN6-202ENST00000538696 IP6K1Q92551 441 aa23.21■■□□□ 1.31
CLN6-202ENST00000538696 C8orf37Q96NL8 207 aa23.2■■□□□ 1.3
CLN6-202ENST00000538696 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
CLN6-202ENST00000538696 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.3
CLN6-202ENST00000538696 INSRP06213 1382 aa23.19■■□□□ 1.3
CLN6-202ENST00000538696 HSP90AB2PQ58FF8 381 aa23.18■■□□□ 1.3
CLN6-202ENST00000538696 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
CLN6-202ENST00000538696 BTG4Q9NY30 223 aa23.16■■□□□ 1.3
CLN6-202ENST00000538696 RGPD1P0DJD0 1748 aa23.16■■□□□ 1.3
CLN6-202ENST00000538696 NGLY1Q96IV0 654 aa23.15■■□□□ 1.3
CLN6-202ENST00000538696 BCL9LQ86UU0 1499 aa23.15■■□□□ 1.3
CLN6-202ENST00000538696 ERBB3P21860 1342 aa23.14■■□□□ 1.29
CLN6-202ENST00000538696 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
CLN6-202ENST00000538696 AFF2P51816 1311 aa23.13■■□□□ 1.29
CLN6-202ENST00000538696 ANKRD24Q8TF21 1146 aa23.12■■□□□ 1.29
CLN6-202ENST00000538696 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
CLN6-202ENST00000538696 LTV1Q96GA3 475 aaPredicted RBP23.11■■□□□ 1.29
CLN6-202ENST00000538696 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
CLN6-202ENST00000538696 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
CLN6-202ENST00000538696 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
CLN6-202ENST00000538696 WDR17Q8IZU2 1322 aa23.09■■□□□ 1.29
CLN6-202ENST00000538696 IL13P35225 146 aa23.08■■□□□ 1.29
CLN6-202ENST00000538696 UNC5CLQ8IV45 518 aa23.08■■□□□ 1.29
CLN6-202ENST00000538696 USP21Q9UK80 565 aa23.08■■□□□ 1.29
CLN6-202ENST00000538696 DIAPH1O60610 1272 aaKnown RBP23.07■■□□□ 1.28
CLN6-202ENST00000538696 ATRNO75882 1429 aa23.07■■□□□ 1.28
CLN6-202ENST00000538696 CSB-PGBD3P0DP91 1061 aa23.07■■□□□ 1.28
CLN6-202ENST00000538696 EVA1CP58658 441 aa23.07■■□□□ 1.28
CLN6-202ENST00000538696 CRB1P82279 1406 aa23.07■■□□□ 1.28
CLN6-202ENST00000538696 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
CLN6-202ENST00000538696 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
CLN6-202ENST00000538696 GLI3P10071 1580 aa23.04■■□□□ 1.28
CLN6-202ENST00000538696 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
CLN6-202ENST00000538696 IGSF1Q8N6C5 1336 aa23.03■■□□□ 1.28
CLN6-202ENST00000538696 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
CLN6-202ENST00000538696 TOM1L2Q6ZVM7 507 aa23.03■■□□□ 1.28
CLN6-202ENST00000538696 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
CLN6-202ENST00000538696 EYA1Q99502 592 aa23.03■■□□□ 1.28
CLN6-202ENST00000538696 VPS72Q15906 364 aa23.02■■□□□ 1.28
CLN6-202ENST00000538696 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
CLN6-202ENST00000538696 SPATA31A5Q5VU36 1347 aa23.01■■□□□ 1.27
CLN6-202ENST00000538696 SPATA31A7Q8IWB4 1347 aa23.01■■□□□ 1.27
CLN6-202ENST00000538696 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
CLN6-202ENST00000538696 USHBP1Q8N6Y0 703 aa23.01■■□□□ 1.27
CLN6-202ENST00000538696 PNISRQ8TF01 805 aaKnown RBP23.01■■□□□ 1.27
CLN6-202ENST00000538696 PARP4Q9UKK3 1724 aaKnown RBP23■■□□□ 1.27
CLN6-202ENST00000538696 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
CLN6-202ENST00000538696 SPATA31A1Q5TZJ5 1347 aa22.99■■□□□ 1.27
CLN6-202ENST00000538696 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
CLN6-202ENST00000538696 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
CLN6-202ENST00000538696 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
CLN6-202ENST00000538696 TRPC5Q9UL62 973 aaPredicted RBP22.99■■□□□ 1.27
CLN6-202ENST00000538696 NUDCQ9Y266 331 aa22.99■■□□□ 1.27
CLN6-202ENST00000538696 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
CLN6-202ENST00000538696 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
CLN6-202ENST00000538696 KDRP35968 1356 aa22.97■■□□□ 1.27
CLN6-202ENST00000538696 THSD7AQ9UPZ6 1657 aa22.96■■□□□ 1.27
CLN6-202ENST00000538696 MEGF6O75095 1541 aa22.96■■□□□ 1.27
CLN6-202ENST00000538696 AEBP1Q8IUX7 1158 aa22.96■■□□□ 1.27
CLN6-202ENST00000538696 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
CLN6-202ENST00000538696 DISP2A7MBM2 1401 aa22.95■■□□□ 1.27
CLN6-202ENST00000538696 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 HMOX1P09601 288 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
CLN6-202ENST00000538696 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
CLN6-202ENST00000538696 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
CLN6-202ENST00000538696 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
CLN6-202ENST00000538696 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
CLN6-202ENST00000538696 GJD4Q96KN9 370 aaPredicted RBP22.93■■□□□ 1.26
CLN6-202ENST00000538696 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
CLN6-202ENST00000538696 THRAP3Q9Y2W1 955 aaKnown RBP22.91■■□□□ 1.26
CLN6-202ENST00000538696 POTEAQ6S8J7 498 aa22.9■■□□□ 1.26
CLN6-202ENST00000538696 BARGINQ6ZT62 677 aa22.9■■□□□ 1.26
CLN6-202ENST00000538696 RSPH6AQ9H0K4 717 aa22.9■■□□□ 1.26
CLN6-202ENST00000538696 OVOS2A0A0G2JMS6 1433 aa22.89■■□□□ 1.26
CLN6-202ENST00000538696 ADAMTS8Q9UP79 889 aa22.88■■□□□ 1.25
CLN6-202ENST00000538696 BRWD3Q6RI45 1802 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms