RNA–Protein interactions for RNA: ENST00000533362.1

PUF60-222, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-222ENST00000533362 STRN4Q9NRL3 753 aa30.67■■■□□ 2.5
PUF60-222ENST00000533362 COL5A2P05997 1499 aaPredicted RBP30.67■■■□□ 2.5
PUF60-222ENST00000533362 RTL1A6NKG5 1358 aa30.66■■■□□ 2.5
PUF60-222ENST00000533362 CDK12Q9NYV4 1490 aaPredicted RBP30.66■■■□□ 2.5
PUF60-222ENST00000533362 BLMP54132 1417 aaPredicted RBP30.65■■■□□ 2.5
PUF60-222ENST00000533362 PER1O15534 1290 aaPredicted RBP30.65■■■□□ 2.5
PUF60-222ENST00000533362 KIF24Q5T7B8 1368 aa30.65■■■□□ 2.5
PUF60-222ENST00000533362 NPC1L1Q9UHC9 1359 aa30.65■■■□□ 2.5
PUF60-222ENST00000533362 AMER1Q5JTC6 1135 aaPredicted RBP30.64■■■□□ 2.5
PUF60-222ENST00000533362 MAP3K19Q56UN5 1328 aa30.64■■■□□ 2.5
PUF60-222ENST00000533362 AMPHP49418 695 aa30.63■■■□□ 2.49
PUF60-222ENST00000533362 MORC1Q86VD1 984 aa30.63■■■□□ 2.49
PUF60-222ENST00000533362 IP6K1Q92551 441 aa30.61■■■□□ 2.49
PUF60-222ENST00000533362 SPATA31A5Q5VU36 1347 aa30.61■■■□□ 2.49
PUF60-222ENST00000533362 SPATA31A7Q8IWB4 1347 aa30.61■■■□□ 2.49
PUF60-222ENST00000533362 AXIN2Q9Y2T1 843 aa30.6■■■□□ 2.49
PUF60-222ENST00000533362 GLI3P10071 1580 aa30.59■■■□□ 2.49
PUF60-222ENST00000533362 CRB1P82279 1406 aa30.59■■■□□ 2.49
PUF60-222ENST00000533362 WDR17Q8IZU2 1322 aa30.59■■■□□ 2.49
PUF60-222ENST00000533362 CSB-PGBD3P0DP91 1061 aa30.58■■■□□ 2.49
PUF60-222ENST00000533362 RRS1Q15050 365 aaKnown RBP30.58■■■□□ 2.49
PUF60-222ENST00000533362 FLT4P35916 1363 aa30.57■■■□□ 2.48
PUF60-222ENST00000533362 SPATA31A1Q5TZJ5 1347 aa30.57■■■□□ 2.48
PUF60-222ENST00000533362 HOXC9P31274 260 aa30.57■■■□□ 2.48
PUF60-222ENST00000533362 LARP1Q6PKG0 1096 aaKnown RBP30.56■■■□□ 2.48
PUF60-222ENST00000533362 RGPD5Q99666 1765 aa30.56■■■□□ 2.48
PUF60-222ENST00000533362 ERBB3P21860 1342 aa30.55■■■□□ 2.48
PUF60-222ENST00000533362 TOM1L2Q6ZVM7 507 aa30.55■■■□□ 2.48
PUF60-222ENST00000533362 FBLN1P23142 703 aa30.54■■■□□ 2.48
PUF60-222ENST00000533362 THRAP3Q9Y2W1 955 aaKnown RBP30.54■■■□□ 2.48
PUF60-222ENST00000533362 SMG6Q86US8 1419 aaKnown RBP30.54■■■□□ 2.48
PUF60-222ENST00000533362 TNNT2P45379 298 aaPredicted RBP30.53■■■□□ 2.48
PUF60-222ENST00000533362 CC2D1BQ5T0F9 858 aaKnown RBP30.53■■■□□ 2.48
PUF60-222ENST00000533362 ILDR2Q71H61 639 aa30.53■■■□□ 2.48
PUF60-222ENST00000533362 ANKRD24Q8TF21 1146 aa30.53■■■□□ 2.48
PUF60-222ENST00000533362 RGS12O14924 1447 aa30.53■■■□□ 2.48
PUF60-222ENST00000533362 FAM208AQ9UK61 1670 aaKnown RBP30.52■■■□□ 2.48
PUF60-222ENST00000533362 ZNF316A6NFI3 1004 aaPredicted RBP30.51■■■□□ 2.47
PUF60-222ENST00000533362 TCP11L2Q8N4U5 519 aa30.51■■■□□ 2.47
PUF60-222ENST00000533362 INSRP06213 1382 aa30.51■■■□□ 2.47
PUF60-222ENST00000533362 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
PUF60-222ENST00000533362 EMILIN1Q9Y6C2 1016 aa30.5■■■□□ 2.47
PUF60-222ENST00000533362 PPM1GO15355 546 aaPredicted RBP30.49■■■□□ 2.47
PUF60-222ENST00000533362 ONECUT3O60422 494 aaPredicted RBP30.49■■■□□ 2.47
PUF60-222ENST00000533362 BARGINQ6ZT62 677 aa30.49■■■□□ 2.47
PUF60-222ENST00000533362 CARD10Q9BWT7 1032 aa30.49■■■□□ 2.47
PUF60-222ENST00000533362 USP35Q9P2H5 1018 aa30.49■■■□□ 2.47
PUF60-222ENST00000533362 POLKQ9UBT6 870 aa30.49■■■□□ 2.47
PUF60-222ENST00000533362 PEAK1Q9H792 1746 aa30.48■■■□□ 2.47
PUF60-222ENST00000533362 DDX10Q13206 875 aaKnown RBP30.48■■■□□ 2.47
PUF60-222ENST00000533362 A0A0G2JS52 829 aa30.47■■■□□ 2.47
PUF60-222ENST00000533362 MYT1Q01538 1121 aa30.47■■■□□ 2.47
PUF60-222ENST00000533362 FAM98CQ17RN3 349 aaKnown RBP30.47■■■□□ 2.47
PUF60-222ENST00000533362 NLRP2Q9NX02 1062 aa30.46■■■□□ 2.47
PUF60-222ENST00000533362 LTV1Q96GA3 475 aaPredicted RBP30.44■■■□□ 2.46
PUF60-222ENST00000533362 CDCA7Q9BWT1 371 aaPredicted RBP30.44■■■□□ 2.46
PUF60-222ENST00000533362 THSD7AQ9UPZ6 1657 aa30.43■■■□□ 2.46
PUF60-222ENST00000533362 HSP90AB2PQ58FF8 381 aa30.43■■■□□ 2.46
PUF60-222ENST00000533362 SEPT12Q8IYM1 358 aa30.43■■■□□ 2.46
PUF60-222ENST00000533362 CNGB1Q14028 1251 aaPredicted RBP30.4■■■□□ 2.46
PUF60-222ENST00000533362 WNK3Q9BYP7 1800 aa30.38■■■□□ 2.45
PUF60-222ENST00000533362 PARP4Q9UKK3 1724 aaKnown RBP30.36■■■□□ 2.45
PUF60-222ENST00000533362 MTHFSP49914 203 aa30.33■■■□□ 2.45
PUF60-222ENST00000533362 KRT27Q7Z3Y8 459 aa30.33■■■□□ 2.45
PUF60-222ENST00000533362 DISP2A7MBM2 1401 aa30.32■■■□□ 2.44
PUF60-222ENST00000533362 IL2RBP14784 551 aa30.32■■■□□ 2.44
PUF60-222ENST00000533362 PARD3Q8TEW0 1356 aa30.31■■■□□ 2.44
PUF60-222ENST00000533362 BRWD3Q6RI45 1802 aa30.31■■■□□ 2.44
PUF60-222ENST00000533362 EIF4A2Q14240 407 aaKnown RBP30.3■■■□□ 2.44
PUF60-222ENST00000533362 RALBP1Q15311 655 aa30.3■■■□□ 2.44
PUF60-222ENST00000533362 NBPF6Q5VWK0 638 aa30.3■■■□□ 2.44
PUF60-222ENST00000533362 NBPF4Q96M43 638 aa30.3■■■□□ 2.44
PUF60-222ENST00000533362 PDE3BQ13370 1112 aa30.29■■■□□ 2.44
PUF60-222ENST00000533362 DDB1Q16531 1140 aa30.29■■■□□ 2.44
PUF60-222ENST00000533362 LRRC37A3O60309 1634 aa30.29■■■□□ 2.44
PUF60-222ENST00000533362 CFAP53Q96M91 514 aa30.28■■■□□ 2.44
PUF60-222ENST00000533362 RGPD2P0DJD1 1756 aa30.28■■■□□ 2.44
PUF60-222ENST00000533362 PPP2R1AP30153 589 aa30.26■■■□□ 2.43
PUF60-222ENST00000533362 RAPGEF4Q8WZA2 1011 aa30.26■■■□□ 2.43
PUF60-222ENST00000533362 NCAPD2Q15021 1401 aa30.25■■■□□ 2.43
PUF60-222ENST00000533362 TNS2Q63HR2 1409 aa30.25■■■□□ 2.43
PUF60-222ENST00000533362 EXOC5O00471 708 aa30.25■■■□□ 2.43
PUF60-222ENST00000533362 SOCS7O14512 581 aa30.25■■■□□ 2.43
PUF60-222ENST00000533362 EYA1Q99502 592 aa30.23■■■□□ 2.43
PUF60-222ENST00000533362 USHBP1Q8N6Y0 703 aa30.22■■■□□ 2.43
PUF60-222ENST00000533362 IGSF1Q8N6C5 1336 aa30.22■■■□□ 2.43
PUF60-222ENST00000533362 PLEKHG2Q9H7P9 1386 aa30.21■■■□□ 2.43
PUF60-222ENST00000533362 DIAPH1O60610 1272 aaKnown RBP30.21■■■□□ 2.43
PUF60-222ENST00000533362 TATP17735 454 aaPredicted RBP30.21■■■□□ 2.43
PUF60-222ENST00000533362 OVOS2A0A0G2JMS6 1433 aa30.2■■■□□ 2.42
PUF60-222ENST00000533362 IL13P35225 146 aa30.19■■■□□ 2.42
PUF60-222ENST00000533362 MEGF6O75095 1541 aa30.18■■■□□ 2.42
PUF60-222ENST00000533362 COL3A1P02461 1466 aaPredicted RBP30.18■■■□□ 2.42
PUF60-222ENST00000533362 FAM196AQ6ZSG2 479 aa30.17■■■□□ 2.42
PUF60-222ENST00000533362 RGPD1P0DJD0 1748 aa30.16■■■□□ 2.42
PUF60-222ENST00000533362 MYBBP1AQ9BQG0 1328 aaKnown RBP30.15■■■□□ 2.42
PUF60-222ENST00000533362 NUDCQ9Y266 331 aa30.14■■■□□ 2.42
PUF60-222ENST00000533362 CCDC125Q86Z20 511 aa30.13■■■□□ 2.41
PUF60-222ENST00000533362 ZCRB1Q8TBF4 217 aaKnown RBP30.13■■■□□ 2.41
PUF60-222ENST00000533362 PRKRIP1Q9H875 184 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms