RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 VASH1Q7L8A9 365 aaPredicted RBP7.98□□□□□ -1.13
ATM-217ENST00000531957 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
ATM-217ENST00000531957 IL27Q8NEV9 243 aa7.98□□□□□ -1.13
ATM-217ENST00000531957 PPFIA3O75145 1194 aa7.97□□□□□ -1.13
ATM-217ENST00000531957 LRRN4Q8WUT4 740 aa7.97□□□□□ -1.13
ATM-217ENST00000531957 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
ATM-217ENST00000531957 SH3BP5LQ7L8J4 393 aa7.96□□□□□ -1.14
ATM-217ENST00000531957 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
ATM-217ENST00000531957 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
ATM-217ENST00000531957 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
ATM-217ENST00000531957 AP1G2O75843 785 aa7.95□□□□□ -1.14
ATM-217ENST00000531957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
ATM-217ENST00000531957 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
ATM-217ENST00000531957 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
ATM-217ENST00000531957 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
ATM-217ENST00000531957 CDV3Q9UKY7 258 aaKnown RBP7.94□□□□□ -1.14
ATM-217ENST00000531957 RNF225M0QZC1 329 aaPredicted RBP7.93□□□□□ -1.14
ATM-217ENST00000531957 TTLL8A6PVC2 850 aa7.92□□□□□ -1.14
ATM-217ENST00000531957 NR6A1Q15406 480 aa7.92□□□□□ -1.14
ATM-217ENST00000531957 CARD14Q9BXL6 1004 aa7.92□□□□□ -1.14
ATM-217ENST00000531957 RFC5P40937 340 aa7.91□□□□□ -1.14
ATM-217ENST00000531957 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
ATM-217ENST00000531957 EPS8L1Q8TE68 723 aa7.91□□□□□ -1.14
ATM-217ENST00000531957 SLC10A4Q96EP9 437 aa7.91□□□□□ -1.14
ATM-217ENST00000531957 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
ATM-217ENST00000531957 HMX1Q9NP08 348 aaPredicted RBP7.91□□□□□ -1.14
ATM-217ENST00000531957 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
ATM-217ENST00000531957 USP17L8P0C7I0 530 aa7.9□□□□□ -1.14
ATM-217ENST00000531957 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
ATM-217ENST00000531957 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
ATM-217ENST00000531957 KCNMA1Q12791 1236 aa7.9□□□□□ -1.14
ATM-217ENST00000531957 PPP1R26Q5T8A7 1209 aaPredicted RBP7.88□□□□□ -1.15
ATM-217ENST00000531957 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
ATM-217ENST00000531957 ARHGAP9Q9BRR9 750 aa7.88□□□□□ -1.15
ATM-217ENST00000531957 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
ATM-217ENST00000531957 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
ATM-217ENST00000531957 SPINT1O43278 529 aa7.87□□□□□ -1.15
ATM-217ENST00000531957 PTSQ03393 145 aa7.87□□□□□ -1.15
ATM-217ENST00000531957 Q6ZVU0 165 aa7.87□□□□□ -1.15
ATM-217ENST00000531957 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
ATM-217ENST00000531957 ZBTB33Q86T24 672 aa7.85□□□□□ -1.15
ATM-217ENST00000531957 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
ATM-217ENST00000531957 KCTD15Q96SI1 283 aaPredicted RBP7.85□□□□□ -1.15
ATM-217ENST00000531957 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
ATM-217ENST00000531957 TMEM151AQ8N4L1 468 aa7.84□□□□□ -1.15
ATM-217ENST00000531957 CCDC155Q8N6L0 562 aa7.84□□□□□ -1.15
ATM-217ENST00000531957 PNMA1Q8ND90 353 aa7.84□□□□□ -1.15
ATM-217ENST00000531957 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
ATM-217ENST00000531957 KRT76Q01546 638 aa7.83□□□□□ -1.16
ATM-217ENST00000531957 CBLBQ13191 982 aa7.83□□□□□ -1.16
ATM-217ENST00000531957 NBPF20Q3BBV1 942 aa7.83□□□□□ -1.16
ATM-217ENST00000531957 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
ATM-217ENST00000531957 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
ATM-217ENST00000531957 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
ATM-217ENST00000531957 PTK2Q05397 1052 aa7.82□□□□□ -1.16
ATM-217ENST00000531957 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
ATM-217ENST00000531957 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
ATM-217ENST00000531957 ITGA6P23229 1130 aa7.81□□□□□ -1.16
ATM-217ENST00000531957 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
ATM-217ENST00000531957 SVOPQ8N4V2 548 aa7.81□□□□□ -1.16
ATM-217ENST00000531957 TRIM52Q96A61 297 aa7.81□□□□□ -1.16
ATM-217ENST00000531957 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 GDF11O95390 407 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 SV2AQ7L0J3 742 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 GPR161Q8N6U8 529 aaKnown RBP7.8□□□□□ -1.16
ATM-217ENST00000531957 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
ATM-217ENST00000531957 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
ATM-217ENST00000531957 CDC14CA4D256 554 aa7.79□□□□□ -1.16
ATM-217ENST00000531957 GSK3AP49840 483 aa7.79□□□□□ -1.16
ATM-217ENST00000531957 RASSF7Q02833 373 aa7.79□□□□□ -1.16
ATM-217ENST00000531957 ADAM32Q8TC27 787 aa7.79□□□□□ -1.16
ATM-217ENST00000531957 RELBQ01201 579 aa7.78□□□□□ -1.16
ATM-217ENST00000531957 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
ATM-217ENST00000531957 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
ATM-217ENST00000531957 GJD4Q96KN9 370 aaPredicted RBP7.78□□□□□ -1.16
ATM-217ENST00000531957 SLURP2P0DP57 97 aa7.77□□□□□ -1.17
ATM-217ENST00000531957 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
ATM-217ENST00000531957 INSM2Q96T92 566 aaPredicted RBP7.77□□□□□ -1.17
ATM-217ENST00000531957 ADH1AP07327 375 aa7.76□□□□□ -1.17
ATM-217ENST00000531957 RAB15P59190 212 aa7.76□□□□□ -1.17
ATM-217ENST00000531957 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
ATM-217ENST00000531957 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
ATM-217ENST00000531957 AGBL1Q96MI9 1066 aa7.76□□□□□ -1.17
ATM-217ENST00000531957 KANK3Q6NY19 840 aa7.75□□□□□ -1.17
ATM-217ENST00000531957 VWA5B2Q8N398 1253 aa7.75□□□□□ -1.17
ATM-217ENST00000531957 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
ATM-217ENST00000531957 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
ATM-217ENST00000531957 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
ATM-217ENST00000531957 MTMR14Q8NCE2 650 aa7.74□□□□□ -1.17
ATM-217ENST00000531957 MARSP56192 900 aaKnown RBP7.73□□□□□ -1.17
ATM-217ENST00000531957 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
ATM-217ENST00000531957 DZIP3Q86Y13 1208 aaKnown RBP7.73□□□□□ -1.17
ATM-217ENST00000531957 SEPT12Q8IYM1 358 aa7.73□□□□□ -1.17
ATM-217ENST00000531957 SCARF2Q96GP6 870 aaPredicted RBP7.73□□□□□ -1.17
ATM-217ENST00000531957 IGHA1P01876 353 aa7.72□□□□□ -1.17
ATM-217ENST00000531957 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
ATM-217ENST00000531957 PTGIRP43119 386 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms