RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 FAM83GA6ND36 823 aa29.57■■■□□ 2.32
PACSIN3-205ENST00000528462 NUTM2BA6NNL0 878 aaPredicted RBP29.57■■■□□ 2.32
PACSIN3-205ENST00000528462 NUTM2EB1AL46 878 aaPredicted RBP29.57■■■□□ 2.32
PACSIN3-205ENST00000528462 HSP90AB2PQ58FF8 381 aa29.57■■■□□ 2.32
PACSIN3-205ENST00000528462 NUTM2AQ8IVF1 878 aaPredicted RBP29.57■■■□□ 2.32
PACSIN3-205ENST00000528462 CCDC184Q52MB2 194 aa29.56■■■□□ 2.32
PACSIN3-205ENST00000528462 LMO7Q8WWI1 1683 aa29.55■■■□□ 2.32
PACSIN3-205ENST00000528462 LRP6O75581 1613 aa29.55■■■□□ 2.32
PACSIN3-205ENST00000528462 CHRNA2Q15822 529 aa29.55■■■□□ 2.32
PACSIN3-205ENST00000528462 MRS2Q9HD23 443 aa29.55■■■□□ 2.32
PACSIN3-205ENST00000528462 AXIN2Q9Y2T1 843 aa29.55■■■□□ 2.32
PACSIN3-205ENST00000528462 COL14A1Q05707 1796 aaKnown RBP29.54■■■□□ 2.32
PACSIN3-205ENST00000528462 ADAMTS2O95450 1211 aa29.54■■■□□ 2.32
PACSIN3-205ENST00000528462 ZBTB7CA1YPR0 619 aa29.53■■■□□ 2.32
PACSIN3-205ENST00000528462 DIAPH1O60610 1272 aaKnown RBP29.52■■■□□ 2.32
PACSIN3-205ENST00000528462 CAMTA1Q9Y6Y1 1673 aa29.51■■■□□ 2.31
PACSIN3-205ENST00000528462 IL13P35225 146 aa29.5■■■□□ 2.31
PACSIN3-205ENST00000528462 ERBB3P21860 1342 aa29.49■■■□□ 2.31
PACSIN3-205ENST00000528462 EIF4A2Q14240 407 aaKnown RBP29.49■■■□□ 2.31
PACSIN3-205ENST00000528462 PNISRQ8TF01 805 aaKnown RBP29.47■■■□□ 2.31
PACSIN3-205ENST00000528462 SLIT2O94813 1529 aa29.47■■■□□ 2.31
PACSIN3-205ENST00000528462 NUDCQ9Y266 331 aa29.47■■■□□ 2.31
PACSIN3-205ENST00000528462 COL5A2P05997 1499 aaPredicted RBP29.46■■■□□ 2.31
PACSIN3-205ENST00000528462 FNBP4Q8N3X1 1017 aaPredicted RBP29.45■■■□□ 2.31
PACSIN3-205ENST00000528462 ANKRD24Q8TF21 1146 aa29.45■■■□□ 2.31
PACSIN3-205ENST00000528462 BTG4Q9NY30 223 aa29.45■■■□□ 2.31
PACSIN3-205ENST00000528462 RGPD5Q99666 1765 aa29.44■■■□□ 2.3
PACSIN3-205ENST00000528462 NWD2Q9ULI1 1742 aa29.43■■■□□ 2.3
PACSIN3-205ENST00000528462 NGLY1Q96IV0 654 aa29.42■■■□□ 2.3
PACSIN3-205ENST00000528462 C8orf37Q96NL8 207 aa29.42■■■□□ 2.3
PACSIN3-205ENST00000528462 PLCH1Q4KWH8 1693 aa29.42■■■□□ 2.3
PACSIN3-205ENST00000528462 WDR17Q8IZU2 1322 aa29.41■■■□□ 2.3
PACSIN3-205ENST00000528462 MEX3CQ5U5Q3 659 aaKnown RBP29.4■■■□□ 2.3
PACSIN3-205ENST00000528462 IGSF1Q8N6C5 1336 aa29.4■■■□□ 2.3
PACSIN3-205ENST00000528462 RGPD1P0DJD0 1748 aa29.4■■■□□ 2.3
PACSIN3-205ENST00000528462 LTV1Q96GA3 475 aaPredicted RBP29.39■■■□□ 2.3
PACSIN3-205ENST00000528462 FAM208AQ9UK61 1670 aaKnown RBP29.39■■■□□ 2.3
PACSIN3-205ENST00000528462 WDR43Q15061 677 aaKnown RBP eCLIP29.39■■■□□ 2.29
PACSIN3-205ENST00000528462 EYA1Q99502 592 aa29.39■■■□□ 2.29
PACSIN3-205ENST00000528462 NCAPD2Q15021 1401 aa29.39■■■□□ 2.29
PACSIN3-205ENST00000528462 EVA1CP58658 441 aa29.37■■■□□ 2.29
PACSIN3-205ENST00000528462 BCL9LQ86UU0 1499 aa29.37■■■□□ 2.29
PACSIN3-205ENST00000528462 U2SURPO15042 1029 aaKnown RBP29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 NBPF6Q5VWK0 638 aa29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 ILDR1Q86SU0 546 aaPredicted RBP29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 NBPF4Q96M43 638 aa29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 NRAPQ86VF7 1730 aa29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 KDRP35968 1356 aa29.36■■■□□ 2.29
PACSIN3-205ENST00000528462 U2AF1L5P0DN76 240 aaPredicted RBP29.35■■■□□ 2.29
PACSIN3-205ENST00000528462 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
PACSIN3-205ENST00000528462 U2AF1Q01081 240 aaKnown RBP eCLIP29.35■■■□□ 2.29
PACSIN3-205ENST00000528462 UNC5CLQ8IV45 518 aa29.35■■■□□ 2.29
PACSIN3-205ENST00000528462 ADAMTS8Q9UP79 889 aa29.35■■■□□ 2.29
PACSIN3-205ENST00000528462 STRN4Q9NRL3 753 aa29.34■■■□□ 2.29
PACSIN3-205ENST00000528462 CRB1P82279 1406 aa29.33■■■□□ 2.29
PACSIN3-205ENST00000528462 LARP1Q6PKG0 1096 aaKnown RBP29.33■■■□□ 2.29
PACSIN3-205ENST00000528462 CARD10Q9BWT7 1032 aa29.33■■■□□ 2.29
PACSIN3-205ENST00000528462 FCHSD2O94868 740 aa29.32■■■□□ 2.28
PACSIN3-205ENST00000528462 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
PACSIN3-205ENST00000528462 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.31■■■□□ 2.28
PACSIN3-205ENST00000528462 AFF2P51816 1311 aa29.31■■■□□ 2.28
PACSIN3-205ENST00000528462 TOM1L2Q6ZVM7 507 aa29.3■■■□□ 2.28
PACSIN3-205ENST00000528462 USP21Q9UK80 565 aa29.3■■■□□ 2.28
PACSIN3-205ENST00000528462 SULT6B1Q6IMI4 303 aa29.3■■■□□ 2.28
PACSIN3-205ENST00000528462 FAM9BQ8IZU0 186 aa29.29■■■□□ 2.28
PACSIN3-205ENST00000528462 VPS72Q15906 364 aa29.28■■■□□ 2.28
PACSIN3-205ENST00000528462 RSPH6AQ9H0K4 717 aa29.28■■■□□ 2.28
PACSIN3-205ENST00000528462 RGPD2P0DJD1 1756 aa29.28■■■□□ 2.28
PACSIN3-205ENST00000528462 PNNQ9H307 717 aaKnown RBP29.27■■■□□ 2.28
PACSIN3-205ENST00000528462 PLEKHG2Q9H7P9 1386 aa29.27■■■□□ 2.28
PACSIN3-205ENST00000528462 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.28
PACSIN3-205ENST00000528462 HMOX1P09601 288 aa29.26■■■□□ 2.27
PACSIN3-205ENST00000528462 SPATA31A5Q5VU36 1347 aa29.25■■■□□ 2.27
PACSIN3-205ENST00000528462 SPATA31A7Q8IWB4 1347 aa29.25■■■□□ 2.27
PACSIN3-205ENST00000528462 SPATA31A1Q5TZJ5 1347 aa29.24■■■□□ 2.27
PACSIN3-205ENST00000528462 USHBP1Q8N6Y0 703 aa29.24■■■□□ 2.27
PACSIN3-205ENST00000528462 PLEKHF1Q96S99 279 aa29.23■■■□□ 2.27
PACSIN3-205ENST00000528462 THRAP3Q9Y2W1 955 aaKnown RBP29.23■■■□□ 2.27
PACSIN3-205ENST00000528462 ATRNO75882 1429 aa29.21■■■□□ 2.27
PACSIN3-205ENST00000528462 PRKAR2BP31323 418 aa29.21■■■□□ 2.27
PACSIN3-205ENST00000528462 TCP11L2Q8N4U5 519 aa29.21■■■□□ 2.27
PACSIN3-205ENST00000528462 TRPC5Q9UL62 973 aaPredicted RBP29.21■■■□□ 2.27
PACSIN3-205ENST00000528462 ZNF772Q68DY9 489 aaPredicted RBP29.2■■■□□ 2.26
PACSIN3-205ENST00000528462 RUNDC1Q96C34 613 aa29.19■■■□□ 2.26
PACSIN3-205ENST00000528462 RAPGEF4Q8WZA2 1011 aa29.18■■■□□ 2.26
PACSIN3-205ENST00000528462 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
PACSIN3-205ENST00000528462 DISP2A7MBM2 1401 aa29.16■■■□□ 2.26
PACSIN3-205ENST00000528462 USP35Q9P2H5 1018 aa29.16■■■□□ 2.26
PACSIN3-205ENST00000528462 NEFMP07197 916 aa29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 IL2RBP14784 551 aa29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 GJD4Q96KN9 370 aaPredicted RBP29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 CDCA7Q9BWT1 371 aaPredicted RBP29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 CCDC9Q9Y3X0 531 aaKnown RBP29.15■■■□□ 2.26
PACSIN3-205ENST00000528462 MEGF6O75095 1541 aa29.14■■■□□ 2.26
PACSIN3-205ENST00000528462 QTRT2Q9H974 415 aaKnown RBP29.14■■■□□ 2.26
PACSIN3-205ENST00000528462 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
PACSIN3-205ENST00000528462 TATP17735 454 aaPredicted RBP29.13■■■□□ 2.25
PACSIN3-205ENST00000528462 CCDC146Q8IYE0 955 aa29.13■■■□□ 2.25
PACSIN3-205ENST00000528462 PHACTR3Q96KR7 559 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms