RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
NPM1-212ENST00000524204 CABLES1Q8TDN4 633 aa10.71□□□□□ -0.69
NPM1-212ENST00000524204 BEGAINQ9BUH8 593 aa10.71□□□□□ -0.69
NPM1-212ENST00000524204 PPP1R26Q5T8A7 1209 aaPredicted RBP10.7□□□□□ -0.7
NPM1-212ENST00000524204 CTSOP43234 321 aaPredicted RBP10.69□□□□□ -0.7
NPM1-212ENST00000524204 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
NPM1-212ENST00000524204 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
NPM1-212ENST00000524204 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
NPM1-212ENST00000524204 MSTNO14793 375 aa10.68□□□□□ -0.7
NPM1-212ENST00000524204 CELA2BP08218 269 aaPredicted RBP10.68□□□□□ -0.7
NPM1-212ENST00000524204 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
NPM1-212ENST00000524204 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
NPM1-212ENST00000524204 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
NPM1-212ENST00000524204 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
NPM1-212ENST00000524204 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
NPM1-212ENST00000524204 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
NPM1-212ENST00000524204 GAS6Q14393 721 aa10.66□□□□□ -0.7
NPM1-212ENST00000524204 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
NPM1-212ENST00000524204 PROCP04070 461 aa10.64□□□□□ -0.71
NPM1-212ENST00000524204 SRSF11Q05519 484 aaKnown RBP10.64□□□□□ -0.71
NPM1-212ENST00000524204 INSM2Q96T92 566 aaPredicted RBP10.64□□□□□ -0.71
NPM1-212ENST00000524204 CARD14Q9BXL6 1004 aa10.64□□□□□ -0.71
NPM1-212ENST00000524204 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
NPM1-212ENST00000524204 AMHR2Q16671 573 aa10.63□□□□□ -0.71
NPM1-212ENST00000524204 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
NPM1-212ENST00000524204 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
NPM1-212ENST00000524204 MAP3K10Q02779 954 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 ERFEQ4G0M1 354 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
NPM1-212ENST00000524204 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 ARMC2Q8NEN0 867 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 TSC1Q92574 1164 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 PGPEP1Q9NXJ5 209 aa10.62□□□□□ -0.71
NPM1-212ENST00000524204 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
NPM1-212ENST00000524204 RELBQ01201 579 aa10.61□□□□□ -0.71
NPM1-212ENST00000524204 RNF217Q8TC41 542 aa10.61□□□□□ -0.71
NPM1-212ENST00000524204 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
NPM1-212ENST00000524204 NBPF14Q5TI25 921 aa10.6□□□□□ -0.71
NPM1-212ENST00000524204 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.59□□□□□ -0.71
NPM1-212ENST00000524204 QPCTQ16769 361 aa10.59□□□□□ -0.71
NPM1-212ENST00000524204 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
NPM1-212ENST00000524204 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
NPM1-212ENST00000524204 POLMQ9NP87 494 aaPredicted RBP10.57□□□□□ -0.72
NPM1-212ENST00000524204 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
NPM1-212ENST00000524204 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
NPM1-212ENST00000524204 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
NPM1-212ENST00000524204 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
NPM1-212ENST00000524204 ENAMQ9NRM1 1142 aa10.55□□□□□ -0.72
NPM1-212ENST00000524204 PHF20L1A8MW92 1017 aa10.54□□□□□ -0.72
NPM1-212ENST00000524204 BEND7Q8N7W2 519 aaPredicted RBP10.53□□□□□ -0.72
NPM1-212ENST00000524204 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
NPM1-212ENST00000524204 NUTM2BA6NNL0 878 aaPredicted RBP10.52□□□□□ -0.73
NPM1-212ENST00000524204 NUTM2EB1AL46 878 aaPredicted RBP10.52□□□□□ -0.73
NPM1-212ENST00000524204 LILRB3O75022 631 aa10.52□□□□□ -0.73
NPM1-212ENST00000524204 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.73
NPM1-212ENST00000524204 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
NPM1-212ENST00000524204 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
NPM1-212ENST00000524204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPM1-212ENST00000524204 NUTM2AQ8IVF1 878 aaPredicted RBP10.52□□□□□ -0.73
NPM1-212ENST00000524204 PARP9Q8IXQ6 854 aa10.52□□□□□ -0.73
NPM1-212ENST00000524204 Q8N3U1 123 aa10.52□□□□□ -0.73
NPM1-212ENST00000524204 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
NPM1-212ENST00000524204 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
NPM1-212ENST00000524204 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
NPM1-212ENST00000524204 GALNT6Q8NCL4 622 aa10.51□□□□□ -0.73
NPM1-212ENST00000524204 PSMG3-AS1Q96PY0 264 aa10.51□□□□□ -0.73
NPM1-212ENST00000524204 GPR25O00155 361 aa10.5□□□□□ -0.73
NPM1-212ENST00000524204 TMPRSS4Q9NRS4 437 aa10.5□□□□□ -0.73
NPM1-212ENST00000524204 IGF1RP08069 1367 aa10.5□□□□□ -0.73
NPM1-212ENST00000524204 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
NPM1-212ENST00000524204 ACDQ96AP0 544 aa10.49□□□□□ -0.73
NPM1-212ENST00000524204 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
NPM1-212ENST00000524204 BCRP11274 1271 aa10.48□□□□□ -0.73
NPM1-212ENST00000524204 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
NPM1-212ENST00000524204 DHX9Q08211 1270 aaKnown RBP10.48□□□□□ -0.73
NPM1-212ENST00000524204 NEDD1Q8NHV4 660 aa10.48□□□□□ -0.73
NPM1-212ENST00000524204 ZNF837Q96EG3 531 aaPredicted RBP10.48□□□□□ -0.73
NPM1-212ENST00000524204 ZMYND10O75800 440 aa10.47□□□□□ -0.73
NPM1-212ENST00000524204 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
NPM1-212ENST00000524204 OCSTAMPQ9BR26 566 aa10.47□□□□□ -0.73
NPM1-212ENST00000524204 ARHGAP9Q9BRR9 750 aa10.47□□□□□ -0.73
NPM1-212ENST00000524204 BAG6P46379 1132 aa10.46□□□□□ -0.73
NPM1-212ENST00000524204 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.73
NPM1-212ENST00000524204 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
NPM1-212ENST00000524204 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
NPM1-212ENST00000524204 RHOQP17081 205 aa10.45□□□□□ -0.74
NPM1-212ENST00000524204 DBN1Q16643 649 aa10.45□□□□□ -0.74
NPM1-212ENST00000524204 PODNQ7Z5L7 613 aa10.45□□□□□ -0.74
NPM1-212ENST00000524204 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
NPM1-212ENST00000524204 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
NPM1-212ENST00000524204 LILRA1O75019 489 aa10.44□□□□□ -0.74
NPM1-212ENST00000524204 ADH1AP07327 375 aa10.44□□□□□ -0.74
NPM1-212ENST00000524204 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
NPM1-212ENST00000524204 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
NPM1-212ENST00000524204 CDV3Q9UKY7 258 aaKnown RBP10.44□□□□□ -0.74
NPM1-212ENST00000524204 FURINP09958 794 aa10.43□□□□□ -0.74
NPM1-212ENST00000524204 PTGIRP43119 386 aa10.43□□□□□ -0.74
NPM1-212ENST00000524204 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
NPM1-212ENST00000524204 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
NPM1-212ENST00000524204 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms