RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 ESPNB1AK53 854 aa8.78□□□□□ -1
CTNNA1-238ENST00000523298 SLC19A1P41440 591 aa8.78□□□□□ -1
CTNNA1-238ENST00000523298 TLL2Q9Y6L7 1015 aa8.78□□□□□ -1
CTNNA1-238ENST00000523298 USP17L3A6NCW0 530 aa8.77□□□□□ -1.01
CTNNA1-238ENST00000523298 USP17L4A6NCW7 530 aa8.77□□□□□ -1.01
CTNNA1-238ENST00000523298 USP17L2Q6R6M4 530 aa8.77□□□□□ -1.01
CTNNA1-238ENST00000523298 USP17L1Q7RTZ2 530 aa8.77□□□□□ -1.01
CTNNA1-238ENST00000523298 RNF135Q8IUD6 432 aa8.77□□□□□ -1.01
CTNNA1-238ENST00000523298 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 PLPP7Q8NBV4 271 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 PBXIP1Q96AQ6 731 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 SLC10A4Q96EP9 437 aa8.76□□□□□ -1.01
CTNNA1-238ENST00000523298 VARSP26640 1264 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 GRM5P41594 1212 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 NCOA4Q13772 614 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 PKD2L1Q9P0L9 805 aa8.75□□□□□ -1.01
CTNNA1-238ENST00000523298 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-238ENST00000523298 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-238ENST00000523298 KCTD15Q96SI1 283 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-238ENST00000523298 RAB15P59190 212 aa8.73□□□□□ -1.01
CTNNA1-238ENST00000523298 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
CTNNA1-238ENST00000523298 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
CTNNA1-238ENST00000523298 PRKD2Q9BZL6 878 aa8.73□□□□□ -1.01
CTNNA1-238ENST00000523298 WNT7AO00755 349 aa8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 SCTRP47872 440 aa8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 ARID5BQ14865 1188 aa8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 CRTC2Q53ET0 693 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 ZMIZ1Q9ULJ6 1067 aa8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
CTNNA1-238ENST00000523298 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 NR3C2P08235 984 aa8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 TRIM67Q6ZTA4 783 aa8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 VASH1Q7L8A9 365 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 MKRN1Q9UHC7 482 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 KIAA1024Q9UPX6 916 aa8.71□□□□□ -1.02
CTNNA1-238ENST00000523298 ERVH48-1M5A8F1 160 aa8.7□□□□□ -1.02
CTNNA1-238ENST00000523298 CLDN10P78369 228 aa8.7□□□□□ -1.02
CTNNA1-238ENST00000523298 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-238ENST00000523298 DKK1O94907 266 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 ATG7O95352 703 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 FSHRP23945 695 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 FOXC1Q12948 553 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 STK32AQ8WU08 396 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 DOLKQ9UPQ8 538 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
CTNNA1-238ENST00000523298 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 GDF9O60383 454 aa8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
CTNNA1-238ENST00000523298 TMEM88BA6NKF7 163 aa8.67□□□□□ -1.02
CTNNA1-238ENST00000523298 PTK7Q13308 1070 aa8.67□□□□□ -1.02
CTNNA1-238ENST00000523298 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
CTNNA1-238ENST00000523298 MPNDQ8N594 471 aa8.67□□□□□ -1.02
CTNNA1-238ENST00000523298 J3QL48 77 aa8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 ADH1CP00326 375 aa8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L21D6R901 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 LILRA1O75019 489 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 EML3Q32P44 896 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 SEPT12Q8IYM1 358 aa8.65□□□□□ -1.02
CTNNA1-238ENST00000523298 RASA1P20936 1047 aa8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 OGFOD1Q8N543 542 aa8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 ZNF594Q96JF6 807 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-238ENST00000523298 FAM196BA6NMK8 535 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 GTF2IP78347 998 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms