RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
PCM1-210ENST00000518936 PPM1GO15355 546 aaPredicted RBP28.7■■■□□ 2.18
PCM1-210ENST00000518936 LRP6O75581 1613 aa28.69■■■□□ 2.18
PCM1-210ENST00000518936 INSRP06213 1382 aa28.68■■■□□ 2.18
PCM1-210ENST00000518936 HOXC9P31274 260 aa28.68■■■□□ 2.18
PCM1-210ENST00000518936 MTHFSP49914 203 aa28.68■■■□□ 2.18
PCM1-210ENST00000518936 C8orf37Q96NL8 207 aa28.68■■■□□ 2.18
PCM1-210ENST00000518936 FAM83GA6ND36 823 aa28.67■■■□□ 2.18
PCM1-210ENST00000518936 EMILIN1Q9Y6C2 1016 aa28.67■■■□□ 2.18
PCM1-210ENST00000518936 LMO7Q8WWI1 1683 aa28.67■■■□□ 2.18
PCM1-210ENST00000518936 PLCH1Q4KWH8 1693 aa28.66■■■□□ 2.18
PCM1-210ENST00000518936 COL18A1P39060 1754 aa28.65■■■□□ 2.18
PCM1-210ENST00000518936 FAM208AQ9UK61 1670 aaKnown RBP28.65■■■□□ 2.18
PCM1-210ENST00000518936 EVA1CP58658 441 aa28.65■■■□□ 2.18
PCM1-210ENST00000518936 CHRNA2Q15822 529 aa28.64■■■□□ 2.18
PCM1-210ENST00000518936 FNBP4Q8N3X1 1017 aaPredicted RBP28.64■■■□□ 2.18
PCM1-210ENST00000518936 SLIT2O94813 1529 aa28.64■■■□□ 2.17
PCM1-210ENST00000518936 BTG4Q9NY30 223 aa28.63■■■□□ 2.17
PCM1-210ENST00000518936 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.63■■■□□ 2.17
PCM1-210ENST00000518936 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
PCM1-210ENST00000518936 FBLN1P23142 703 aa28.6■■■□□ 2.17
PCM1-210ENST00000518936 ZNF772Q68DY9 489 aaPredicted RBP28.6■■■□□ 2.17
PCM1-210ENST00000518936 PEAK1Q9H792 1746 aa28.6■■■□□ 2.17
PCM1-210ENST00000518936 COL5A2P05997 1499 aaPredicted RBP28.59■■■□□ 2.17
PCM1-210ENST00000518936 CSB-PGBD3P0DP91 1061 aa28.59■■■□□ 2.17
PCM1-210ENST00000518936 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
PCM1-210ENST00000518936 ERBB3P21860 1342 aa28.59■■■□□ 2.17
PCM1-210ENST00000518936 CAMTA1Q9Y6Y1 1673 aa28.58■■■□□ 2.17
PCM1-210ENST00000518936 DIAPH1O60610 1272 aaKnown RBP28.58■■■□□ 2.17
PCM1-210ENST00000518936 ANKRD24Q8TF21 1146 aa28.58■■■□□ 2.17
PCM1-210ENST00000518936 USP21Q9UK80 565 aa28.58■■■□□ 2.17
PCM1-210ENST00000518936 HSP90AB2PQ58FF8 381 aa28.57■■■□□ 2.16
PCM1-210ENST00000518936 WDR17Q8IZU2 1322 aa28.57■■■□□ 2.16
PCM1-210ENST00000518936 RGPD5Q99666 1765 aa28.57■■■□□ 2.16
PCM1-210ENST00000518936 AFF2P51816 1311 aa28.56■■■□□ 2.16
PCM1-210ENST00000518936 PHF23Q9BUL5 403 aaPredicted RBP28.56■■■□□ 2.16
PCM1-210ENST00000518936 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
PCM1-210ENST00000518936 NRAPQ86VF7 1730 aa28.55■■■□□ 2.16
PCM1-210ENST00000518936 CCER2I3L3R5 266 aa28.54■■■□□ 2.16
PCM1-210ENST00000518936 STRN4Q9NRL3 753 aa28.54■■■□□ 2.16
PCM1-210ENST00000518936 CRB1P82279 1406 aa28.53■■■□□ 2.16
PCM1-210ENST00000518936 TRPC5Q9UL62 973 aaPredicted RBP28.53■■■□□ 2.16
PCM1-210ENST00000518936 TOM1L2Q6ZVM7 507 aa28.52■■■□□ 2.16
PCM1-210ENST00000518936 VPS72Q15906 364 aa28.51■■■□□ 2.15
PCM1-210ENST00000518936 THRAP3Q9Y2W1 955 aaKnown RBP28.51■■■□□ 2.15
PCM1-210ENST00000518936 BCL9LQ86UU0 1499 aa28.51■■■□□ 2.15
PCM1-210ENST00000518936 EIF4A2Q14240 407 aaKnown RBP28.5■■■□□ 2.15
PCM1-210ENST00000518936 LTV1Q96GA3 475 aaPredicted RBP28.5■■■□□ 2.15
PCM1-210ENST00000518936 PNNQ9H307 717 aaKnown RBP28.5■■■□□ 2.15
PCM1-210ENST00000518936 CARD10Q9BWT7 1032 aa28.49■■■□□ 2.15
PCM1-210ENST00000518936 COL3A1P02461 1466 aaPredicted RBP28.48■■■□□ 2.15
PCM1-210ENST00000518936 WDR43Q15061 677 aaKnown RBP eCLIP28.48■■■□□ 2.15
PCM1-210ENST00000518936 MRS2Q9HD23 443 aa28.48■■■□□ 2.15
PCM1-210ENST00000518936 NLRP2Q9NX02 1062 aa28.48■■■□□ 2.15
PCM1-210ENST00000518936 CCDC9Q9Y3X0 531 aaKnown RBP28.48■■■□□ 2.15
PCM1-210ENST00000518936 IL13P35225 146 aa28.47■■■□□ 2.15
PCM1-210ENST00000518936 PLEKHG2Q9H7P9 1386 aa28.47■■■□□ 2.15
PCM1-210ENST00000518936 CDCA7Q9BWT1 371 aaPredicted RBP28.46■■■□□ 2.15
PCM1-210ENST00000518936 LARP1Q6PKG0 1096 aaKnown RBP28.44■■■□□ 2.14
PCM1-210ENST00000518936 IGSF1Q8N6C5 1336 aa28.43■■■□□ 2.14
PCM1-210ENST00000518936 ATRNO75882 1429 aa28.43■■■□□ 2.14
PCM1-210ENST00000518936 U2SURPO15042 1029 aaKnown RBP28.43■■■□□ 2.14
PCM1-210ENST00000518936 NEFMP07197 916 aa28.43■■■□□ 2.14
PCM1-210ENST00000518936 SPATA31A5Q5VU36 1347 aa28.43■■■□□ 2.14
PCM1-210ENST00000518936 SPATA31A7Q8IWB4 1347 aa28.43■■■□□ 2.14
PCM1-210ENST00000518936 TCP11L2Q8N4U5 519 aa28.42■■■□□ 2.14
PCM1-210ENST00000518936 QTRT2Q9H974 415 aaKnown RBP28.42■■■□□ 2.14
PCM1-210ENST00000518936 SPATA31A1Q5TZJ5 1347 aa28.42■■■□□ 2.14
PCM1-210ENST00000518936 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
PCM1-210ENST00000518936 EYA1Q99502 592 aa28.4■■■□□ 2.14
PCM1-210ENST00000518936 U2AF1L5P0DN76 240 aaPredicted RBP28.39■■■□□ 2.14
PCM1-210ENST00000518936 U2AF1Q01081 240 aaKnown RBP eCLIP28.39■■■□□ 2.14
PCM1-210ENST00000518936 NCAPD2Q15021 1401 aa28.39■■■□□ 2.14
PCM1-210ENST00000518936 RAPGEF4Q8WZA2 1011 aa28.39■■■□□ 2.14
PCM1-210ENST00000518936 GJD4Q96KN9 370 aaPredicted RBP28.39■■■□□ 2.14
PCM1-210ENST00000518936 BARGINQ6ZT62 677 aa28.38■■■□□ 2.13
PCM1-210ENST00000518936 MIER1Q8N108 512 aa28.38■■■□□ 2.13
PCM1-210ENST00000518936 KDRP35968 1356 aa28.37■■■□□ 2.13
PCM1-210ENST00000518936 FCHSD2O94868 740 aa28.37■■■□□ 2.13
PCM1-210ENST00000518936 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
PCM1-210ENST00000518936 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
PCM1-210ENST00000518936 RBM6P78332 1123 aaKnown RBP28.36■■■□□ 2.13
PCM1-210ENST00000518936 RGPD2P0DJD1 1756 aa28.35■■■□□ 2.13
PCM1-210ENST00000518936 IL2RBP14784 551 aa28.35■■■□□ 2.13
PCM1-210ENST00000518936 TATP17735 454 aaPredicted RBP28.35■■■□□ 2.13
PCM1-210ENST00000518936 SULT6B1Q6IMI4 303 aa28.35■■■□□ 2.13
PCM1-210ENST00000518936 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
PCM1-210ENST00000518936 USP35Q9P2H5 1018 aa28.34■■■□□ 2.13
PCM1-210ENST00000518936 RXRBP28702 533 aa28.32■■■□□ 2.12
PCM1-210ENST00000518936 WNK3Q9BYP7 1800 aa28.31■■■□□ 2.12
PCM1-210ENST00000518936 AMOTQ4VCS5 1084 aa28.3■■■□□ 2.12
PCM1-210ENST00000518936 PNISRQ8TF01 805 aaKnown RBP28.3■■■□□ 2.12
PCM1-210ENST00000518936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.3■■■□□ 2.128e-15■■□□□ 13
PCM1-210ENST00000518936 MAPK8IP3Q9UPT6 1336 aa28.28■■■□□ 2.12
PCM1-210ENST00000518936 SPG7Q9UQ90 795 aa28.28■■■□□ 2.12
PCM1-210ENST00000518936 HMOX1P09601 288 aa28.27■■■□□ 2.12
PCM1-210ENST00000518936 USHBP1Q8N6Y0 703 aa28.27■■■□□ 2.12
PCM1-210ENST00000518936 GLI3P10071 1580 aa28.27■■■□□ 2.12
PCM1-210ENST00000518936 ONECUT3O60422 494 aaPredicted RBP28.26■■■□□ 2.11
PCM1-210ENST00000518936 PLEKHO1Q53GL0 409 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms