RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
HMGB1P19-201ENST00000517578 YTHDC1Q96MU7 727 aaKnown RBP6.85□□□□□ -1.31
HMGB1P19-201ENST00000517578 FSHRP23945 695 aa6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 TRMT44Q8IYL2 757 aaKnown RBP6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 ARMC2Q8NEN0 867 aa6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 HELBQ8NG08 1087 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 ARXQ96QS3 562 aa6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 MAP4K5Q9Y4K4 846 aa6.84□□□□□ -1.31
HMGB1P19-201ENST00000517578 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 FBXO31Q5XUX0 539 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 MEIOBQ8N635 442 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 ZSCAN1Q8NBB4 408 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
HMGB1P19-201ENST00000517578 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P19-201ENST00000517578 MAGEB6P1A0A0J9YX57 407 aa6.81□□□□□ -1.32
HMGB1P19-201ENST00000517578 CTDSPL2Q05D32 466 aa6.81□□□□□ -1.32
HMGB1P19-201ENST00000517578 VASH1Q7L8A9 365 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P19-201ENST00000517578 SOS2Q07890 1332 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 MAN1A2O60476 641 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 BMP2P12643 396 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 ERFEQ4G0M1 354 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 CARD14Q9BXL6 1004 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 RSPH6AQ9H0K4 717 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 DNMT3LQ9UJW3 386 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 MYO15BQ96JP2 1530 aa6.8□□□□□ -1.32
HMGB1P19-201ENST00000517578 CCDC116Q8IYX3 515 aa6.79□□□□□ -1.32
HMGB1P19-201ENST00000517578 IL27Q8NEV9 243 aa6.79□□□□□ -1.32
HMGB1P19-201ENST00000517578 LRRN4Q8WUT4 740 aa6.79□□□□□ -1.32
HMGB1P19-201ENST00000517578 DDRGK1Q96HY6 314 aa6.79□□□□□ -1.32
HMGB1P19-201ENST00000517578 FAM181BA6NEQ2 426 aa6.78□□□□□ -1.32
HMGB1P19-201ENST00000517578 PPFIA3O75145 1194 aa6.78□□□□□ -1.32
HMGB1P19-201ENST00000517578 UPP2O95045 317 aa6.78□□□□□ -1.32
HMGB1P19-201ENST00000517578 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
HMGB1P19-201ENST00000517578 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P19-201ENST00000517578 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
HMGB1P19-201ENST00000517578 NR6A1Q15406 480 aa6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 SKIV2LQ15477 1246 aaKnown RBP6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 PROCA1Q8NCQ7 364 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 OCSTAMPQ9BR26 566 aa6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 TSEN34Q9BSV6 310 aaKnown RBP6.76□□□□□ -1.33
HMGB1P19-201ENST00000517578 CBLBQ13191 982 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 SH3D19Q5HYK7 790 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 Q6ZVU0 165 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 ARHGAP9Q9BRR9 750 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
HMGB1P19-201ENST00000517578 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P19-201ENST00000517578 SUPT16HQ9Y5B9 1047 aaKnown RBP6.74□□□□□ -1.33
HMGB1P19-201ENST00000517578 TTLL8A6PVC2 850 aa6.73□□□□□ -1.33
HMGB1P19-201ENST00000517578 DEKP35659 375 aaKnown RBP6.73□□□□□ -1.33
HMGB1P19-201ENST00000517578 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
HMGB1P19-201ENST00000517578 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
HMGB1P19-201ENST00000517578 ZC3H4Q9UPT8 1303 aaKnown RBP6.73□□□□□ -1.33
HMGB1P19-201ENST00000517578 SPINT1O43278 529 aa6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 KRT76Q01546 638 aa6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 PTSQ03393 145 aa6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 GPR161Q8N6U8 529 aaKnown RBP6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 EPS8L1Q8TE68 723 aa6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
HMGB1P19-201ENST00000517578 FIGNL2A6NMB9 653 aa6.71□□□□□ -1.34
HMGB1P19-201ENST00000517578 INTS6LQ5JSJ4 861 aaKnown RBP6.71□□□□□ -1.34
HMGB1P19-201ENST00000517578 ZBTB33Q86T24 672 aa6.71□□□□□ -1.34
HMGB1P19-201ENST00000517578 HMX1Q9NP08 348 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P19-201ENST00000517578 AP1G2O75843 785 aa6.7□□□□□ -1.34
HMGB1P19-201ENST00000517578 PTK2Q05397 1052 aa6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 DHX9Q08211 1270 aaKnown RBP6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 ADAM32Q8TC27 787 aa6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 AGBL1Q96MI9 1066 aa6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 RBM19Q9Y4C8 960 aaKnown RBP6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 GPSM3Q9Y4H4 160 aa6.69□□□□□ -1.34
HMGB1P19-201ENST00000517578 SLC35F4A4IF30 521 aa6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 CTSOP43234 321 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 ZNF326Q5BKZ1 582 aaKnown RBP6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 CCDC155Q8N6L0 562 aa6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 NANOS1Q8WY41 292 aaKnown RBP6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
HMGB1P19-201ENST00000517578 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
HMGB1P19-201ENST00000517578 INSM2Q96T92 566 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P19-201ENST00000517578 GSK3AP49840 483 aa6.66□□□□□ -1.34
HMGB1P19-201ENST00000517578 RELBQ01201 579 aa6.66□□□□□ -1.34
HMGB1P19-201ENST00000517578 ZNF784Q8NCA9 323 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P19-201ENST00000517578 CNTNAP3BQ96NU0 1288 aa6.66□□□□□ -1.34
HMGB1P19-201ENST00000517578 CNTNAP3Q9BZ76 1288 aa6.66□□□□□ -1.34
HMGB1P19-201ENST00000517578 LILRA1O75019 489 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 RFC5P40937 340 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 PDE4CQ08493 712 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 NBPF20Q3BBV1 942 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.34
HMGB1P19-201ENST00000517578 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms