RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 SH3D19Q5HYK7 790 aa6.07□□□□□ -1.44
SNORA40.15-201ENST00000516884 POLR3EQ9NVU0 708 aa6.07□□□□□ -1.44
SNORA40.15-201ENST00000516884 FKBPLQ9UIM3 349 aa6.07□□□□□ -1.44
SNORA40.15-201ENST00000516884 MAGEB6P1A0A0J9YX57 407 aa6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 SPINT1O43278 529 aa6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 SKIV2LQ15477 1246 aaKnown RBP6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 PPP1R26Q5T8A7 1209 aaPredicted RBP6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 CDV3Q9UKY7 258 aaKnown RBP6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 GPSM3Q9Y4H4 160 aa6.06□□□□□ -1.44
SNORA40.15-201ENST00000516884 TTLL8A6PVC2 850 aa6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 GSK3AP49840 483 aa6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 KRT76Q01546 638 aa6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 LRRN4Q8WUT4 740 aa6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 NANOS1Q8WY41 292 aaKnown RBP6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 CARD14Q9BXL6 1004 aa6.05□□□□□ -1.44
SNORA40.15-201ENST00000516884 KCTD15Q96SI1 283 aaPredicted RBP6.04□□□□□ -1.44
SNORA40.15-201ENST00000516884 ARHGAP9Q9BRR9 750 aa6.04□□□□□ -1.44
SNORA40.15-201ENST00000516884 PGPEP1Q9NXJ5 209 aa6.04□□□□□ -1.44
SNORA40.15-201ENST00000516884 PTSQ03393 145 aa6.03□□□□□ -1.44
SNORA40.15-201ENST00000516884 CBLBQ13191 982 aa6.03□□□□□ -1.44
SNORA40.15-201ENST00000516884 INTS6LQ5JSJ4 861 aaKnown RBP6.03□□□□□ -1.44
SNORA40.15-201ENST00000516884 GPR161Q8N6U8 529 aaKnown RBP6.03□□□□□ -1.44
SNORA40.15-201ENST00000516884 SLC10A4Q96EP9 437 aa6.03□□□□□ -1.44
SNORA40.15-201ENST00000516884 DHX9Q08211 1270 aaKnown RBP6.02□□□□□ -1.45
SNORA40.15-201ENST00000516884 NR6A1Q15406 480 aa6.02□□□□□ -1.45
SNORA40.15-201ENST00000516884 PROCA1Q8NCQ7 364 aaPredicted RBP6.02□□□□□ -1.45
SNORA40.15-201ENST00000516884 KDM4CQ9H3R0 1056 aa6.02□□□□□ -1.45
SNORA40.15-201ENST00000516884 SLC35F4A4IF30 521 aa6.01□□□□□ -1.45
SNORA40.15-201ENST00000516884 KCNMA1Q12791 1236 aa6.01□□□□□ -1.45
SNORA40.15-201ENST00000516884 DDRGK1Q96HY6 314 aa6.01□□□□□ -1.45
SNORA40.15-201ENST00000516884 PTK2Q05397 1052 aa6□□□□□ -1.45
SNORA40.15-201ENST00000516884 CCDC155Q8N6L0 562 aa6□□□□□ -1.45
SNORA40.15-201ENST00000516884 ADAM32Q8TC27 787 aa6□□□□□ -1.45
SNORA40.15-201ENST00000516884 FAM117AQ9C073 453 aa6□□□□□ -1.45
SNORA40.15-201ENST00000516884 ESPNB1AK53 854 aa5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 LILRA1O75019 489 aa5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 ZBTB33Q86T24 672 aa5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 KDF1Q8NAX2 398 aaPredicted RBP5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 EPS8L1Q8TE68 723 aa5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 GPBP1L1Q9HC44 474 aaPredicted RBP5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 HMX1Q9NP08 348 aaPredicted RBP5.99□□□□□ -1.45
SNORA40.15-201ENST00000516884 SENP3-EIF4A1A0A087X0R7 540 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 SLURP2P0DP57 97 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 CTSOP43234 321 aaPredicted RBP5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 NBPF20Q3BBV1 942 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 RNF217Q8TC41 542 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
SNORA40.15-201ENST00000516884 FIGNL2A6NMB9 653 aa5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 USP17L8P0C7I0 530 aa5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 ITGA6P23229 1130 aa5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 RNFT1Q5M7Z0 435 aa5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 AGBL1Q96MI9 1066 aa5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 INSM2Q96T92 566 aaPredicted RBP5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 COL25A1Q9BXS0 654 aaPredicted RBP5.97□□□□□ -1.45
SNORA40.15-201ENST00000516884 AP1G2O75843 785 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 ADH1AP07327 375 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 FOXD4L5Q5VV16 416 aaPredicted RBP5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 ZNF784Q8NCA9 323 aaPredicted RBP5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 CNTNAP3BQ96NU0 1288 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 TRIM34Q9BYJ4 488 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 CNTNAP3Q9BZ76 1288 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 GOPCQ9HD26 462 aa5.96□□□□□ -1.46
SNORA40.15-201ENST00000516884 ADD1P35611 737 aaKnown RBP5.95□□□□□ -1.46
SNORA40.15-201ENST00000516884 RELBQ01201 579 aa5.95□□□□□ -1.46
SNORA40.15-201ENST00000516884 ZNF385CQ66K41 422 aaPredicted RBP5.95□□□□□ -1.46
SNORA40.15-201ENST00000516884 SEPT12Q8IYM1 358 aa5.95□□□□□ -1.46
SNORA40.15-201ENST00000516884 TMPRSS4Q9NRS4 437 aa5.95□□□□□ -1.46
SNORA40.15-201ENST00000516884 ERVH48-1M5A8F1 160 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 ARHGEF15O94989 841 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 RFC5P40937 340 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 PTGIRP43119 386 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 PNMA1Q8ND90 353 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 ADAMTS8Q9UP79 889 aa5.94□□□□□ -1.46
SNORA40.15-201ENST00000516884 SV2AQ7L0J3 742 aa5.92□□□□□ -1.46
SNORA40.15-201ENST00000516884 VWA5B2Q8N398 1253 aa5.92□□□□□ -1.46
SNORA40.15-201ENST00000516884 WHAMMQ8TF30 809 aa5.92□□□□□ -1.46
SNORA40.15-201ENST00000516884 ZNF395Q9H8N7 513 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.15-201ENST00000516884 POLMQ9NP87 494 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.15-201ENST00000516884 RNF225M0QZC1 329 aaPredicted RBP5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 RNF144AP50876 292 aaPredicted RBP5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 RASSF7Q02833 373 aa5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 GAS6Q14393 721 aa5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 DZIP3Q86Y13 1208 aaKnown RBP5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 GJD4Q96KN9 370 aaPredicted RBP5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 CUEDC1Q9NWM3 386 aaPredicted RBP5.91□□□□□ -1.46
SNORA40.15-201ENST00000516884 TMEM259Q4ZIN3 620 aa5.9□□□□□ -1.46
SNORA40.15-201ENST00000516884 CCDC125Q86Z20 511 aa5.9□□□□□ -1.46
SNORA40.15-201ENST00000516884 TMEM151AQ8N4L1 468 aa5.9□□□□□ -1.46
SNORA40.15-201ENST00000516884 SOCS7O14512 581 aa5.89□□□□□ -1.47
SNORA40.15-201ENST00000516884 GPR37L1O60883 481 aa5.89□□□□□ -1.47
SNORA40.15-201ENST00000516884 GPC1P35052 558 aa5.89□□□□□ -1.47
SNORA40.15-201ENST00000516884 LYSMD3Q7Z3D4 306 aa5.89□□□□□ -1.47
SNORA40.15-201ENST00000516884 KCTD17Q8N5Z5 321 aa5.89□□□□□ -1.47
SNORA40.15-201ENST00000516884 CDC14CA4D256 554 aa5.88□□□□□ -1.47
SNORA40.15-201ENST00000516884 ZBBXA8MT70 800 aa5.88□□□□□ -1.47
SNORA40.15-201ENST00000516884 GDF11O95390 407 aa5.88□□□□□ -1.47
SNORA40.15-201ENST00000516884 FBXO45P0C2W1 286 aa5.88□□□□□ -1.47
SNORA40.15-201ENST00000516884 ERVK-9P63128 1117 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms