RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	CERS3	Q8IU89	383 aa		13.57	□□□□□ -0.24
PDCD6-210	ENST00000513582	ASXL1	Q8IXJ9	1541 aa		13.57	□□□□□ -0.24
PDCD6-210	ENST00000513582	CHAF1A	Q13111	956 aa	Predicted RBP	13.56	□□□□□ -0.24
PDCD6-210	ENST00000513582	NGEF	Q8N5V2	710 aa		13.56	□□□□□ -0.24
PDCD6-210	ENST00000513582	RUNDC1	Q96C34	613 aa		13.56	□□□□□ -0.24
PDCD6-210	ENST00000513582	TRERF1	Q96PN7	1200 aa		13.56	□□□□□ -0.24
PDCD6-210	ENST00000513582	NOB1	Q9ULX3	412 aa	Known RBP	13.56	□□□□□ -0.24
PDCD6-210	ENST00000513582	ERICH4	A6NGS2	130 aa		13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	NOL8	Q76FK4	1167 aa	Known RBP	13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	THUMPD2	Q9BTF0	503 aa	Known RBP	13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	PRDM15	P57071	1507 aa	Predicted RBP	13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	A2M	P01023	1474 aa		13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	CYP2E1	P05181	493 aa	Predicted RBP	13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	ZDHHC9	Q9Y397	364 aa		13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	SYCP2	Q9BX26	1530 aa		13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	SAMD9L	Q8IVG5	1584 aa		13.55	□□□□□ -0.24
PDCD6-210	ENST00000513582	EXOSC9	Q06265	439 aa	Known RBP	13.54	□□□□□ -0.24
PDCD6-210	ENST00000513582	FKBP5	Q13451	457 aa	Predicted RBP	13.54	□□□□□ -0.24
PDCD6-210	ENST00000513582	SSH1	Q8WYL5	1049 aa		13.54	□□□□□ -0.24
PDCD6-210	ENST00000513582	ADCY5	O95622	1261 aa		13.54	□□□□□ -0.24
PDCD6-210	ENST00000513582	GDPD2	Q9HCC8	539 aa		13.54	□□□□□ -0.24
PDCD6-210	ENST00000513582	ATF7IP	Q6VMQ6	1270 aa		13.53	□□□□□ -0.24
PDCD6-210	ENST00000513582	AEBP1	Q8IUX7	1158 aa		13.53	□□□□□ -0.24
PDCD6-210	ENST00000513582	PLXNC1	O60486	1568 aa		13.53	□□□□□ -0.24
PDCD6-210	ENST00000513582	RABEP1	Q15276	862 aa		13.53	□□□□□ -0.24
PDCD6-210	ENST00000513582	WDR63	Q8IWG1	891 aa		13.53	□□□□□ -0.24
PDCD6-210	ENST00000513582	OGFR	Q9NZT2	677 aa		13.52	□□□□□ -0.25
PDCD6-210	ENST00000513582	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.52	□□□□□ -0.25
PDCD6-210	ENST00000513582	DIAPH3	Q9NSV4	1193 aa		13.52	□□□□□ -0.25
PDCD6-210	ENST00000513582	ZBTB40	Q9NUA8	1239 aa		13.52	□□□□□ -0.25
PDCD6-210	ENST00000513582	PREX2	Q70Z35	1606 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	ZNF428	Q96B54	188 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	SPC24	Q8NBT2	197 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	CARD14	Q9BXL6	1004 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	MBD3	O95983	291 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	ANKRD7	Q92527	254 aa		13.51	□□□□□ -0.25
PDCD6-210	ENST00000513582	CDC45	O75419	566 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	NAA30	Q147X3	362 aa	Predicted RBP	13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	NECTIN2	Q92692	538 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	FEZ1	Q99689	392 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	PLA2R1	Q13018	1463 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	ZBTB9	Q96C00	473 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	CWC22	Q9HCG8	908 aa	Known RBP	13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	PYCARD	Q9ULZ3	195 aa		13.5	□□□□□ -0.25
PDCD6-210	ENST00000513582	LAMC1	P11047	1609 aa		13.49	□□□□□ -0.25
PDCD6-210	ENST00000513582	DUOX2	Q9NRD8	1548 aa		13.49	□□□□□ -0.25
PDCD6-210	ENST00000513582	HCLS1	P14317	486 aa	Predicted RBP	13.49	□□□□□ -0.25
PDCD6-210	ENST00000513582	SLFN14	P0C7P3	912 aa		13.49	□□□□□ -0.25
PDCD6-210	ENST00000513582	ST18	O60284	1047 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	SLC4A10	Q6U841	1118 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	CCDC66	A2RUB6	948 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	GADD45B	O75293	160 aa	Predicted RBP	13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	TIGD1	Q96MW7	591 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	SPTLC3	Q9NUV7	552 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	TRIM6-TRIM34	B2RNG4	842 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	NCBP1	Q09161	790 aa	Known RBP	13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	SYAP1	Q96A49	352 aa	Predicted RBP	13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	TRIM34	Q9BYJ4	488 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	CDC42BPB	Q9Y5S2	1711 aa		13.48	□□□□□ -0.25
PDCD6-210	ENST00000513582	MYO5C	Q9NQX4	1742 aa		13.47	□□□□□ -0.25
PDCD6-210	ENST00000513582	ARHGAP31	Q2M1Z3	1444 aa		13.47	□□□□□ -0.25
PDCD6-210	ENST00000513582	UNC13B	O14795	1591 aa		13.47	□□□□□ -0.25
PDCD6-210	ENST00000513582	DNAJC2	Q99543	621 aa	Known RBP	13.47	□□□□□ -0.25
PDCD6-210	ENST00000513582	MAST1	Q9Y2H9	1570 aa		13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	TRAPPC8	Q9Y2L5	1435 aa		13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	SMARCA5	O60264	1052 aa	Predicted RBP	13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	GABPB1	Q06547	395 aa	Predicted RBP	13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	ZFP91	Q96JP5	570 aa	Predicted RBP	13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	CTNNA3	Q9UI47	895 aa		13.46	□□□□□ -0.25
PDCD6-210	ENST00000513582	GSPT1	P15170	499 aa	Known RBP	13.46	□□□□□ -0.26
PDCD6-210	ENST00000513582	TAOK2	Q9UL54	1235 aa		13.46	□□□□□ -0.26
PDCD6-210	ENST00000513582	LMOD2	Q6P5Q4	547 aa		13.45	□□□□□ -0.26
PDCD6-210	ENST00000513582	C16orf45	Q96MC5	204 aa	Predicted RBP	13.45	□□□□□ -0.26
PDCD6-210	ENST00000513582	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.45	□□□□□ -0.26	2e-6	■■■■■ 26.8
PDCD6-210	ENST00000513582	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	KIAA1524	Q8TCG1	905 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	PRAM1	Q96QH2	718 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	PHF23	Q9BUL5	403 aa	Predicted RBP	13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	PHF14	O94880	888 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	IRX3	P78415	501 aa	Predicted RBP	13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	TERF2	Q15554	542 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	USP26	Q9BXU7	913 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	KCNF1	Q9H3M0	494 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	IQGAP3	Q86VI3	1631 aa		13.44	□□□□□ -0.26
PDCD6-210	ENST00000513582	CTIF	O43310	598 aa	Known RBP	13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	CAPN2	P17655	700 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	LTV1	Q96GA3	475 aa	Predicted RBP	13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	TTC37	Q6PGP7	1564 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	NSD3	Q9BZ95	1437 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	POLR3A	O14802	1390 aa	Predicted RBP	13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	NPC1L1	Q9UHC9	1359 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	ATP10A	O60312	1499 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	DCTN1	Q14203	1278 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	WAPL	Q7Z5K2	1190 aa		13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	DDX41	Q9UJV9	622 aa	Known RBP	13.43	□□□□□ -0.26
PDCD6-210	ENST00000513582	PLCH2	O75038	1416 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	ST7	Q9NRC1	585 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms