RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MARSP56192 900 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-218ENST00000513341 WHAMMQ8TF30 809 aa7.91□□□□□ -1.14
PDLIM5-218ENST00000513341 CC2D2AQ9P2K1 1620 aa7.91□□□□□ -1.14
PDLIM5-218ENST00000513341 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 SV2AQ7L0J3 742 aa7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 SH3BP5LQ7L8J4 393 aa7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 TBC1D2Q9BYX2 928 aa7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
PDLIM5-218ENST00000513341 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
PDLIM5-218ENST00000513341 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
PDLIM5-218ENST00000513341 GIGYF2Q6Y7W6 1299 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-218ENST00000513341 PGPEP1Q9NXJ5 209 aa7.88□□□□□ -1.15
PDLIM5-218ENST00000513341 ADAM23O75077 832 aa7.87□□□□□ -1.15
PDLIM5-218ENST00000513341 SRSF11Q05519 484 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-218ENST00000513341 TTLL12Q14166 644 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-218ENST00000513341 TUSC1Q2TAM9 212 aa7.87□□□□□ -1.15
PDLIM5-218ENST00000513341 VWA5B2Q8N398 1253 aa7.87□□□□□ -1.15
PDLIM5-218ENST00000513341 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
PDLIM5-218ENST00000513341 PER1O15534 1290 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-218ENST00000513341 PPP1R26Q5T8A7 1209 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-218ENST00000513341 CDV3Q9UKY7 258 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-218ENST00000513341 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
PDLIM5-218ENST00000513341 BARGINQ6ZT62 677 aa7.84□□□□□ -1.15
PDLIM5-218ENST00000513341 RIC3Q7Z5B4 369 aa7.84□□□□□ -1.15
PDLIM5-218ENST00000513341 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
PDLIM5-218ENST00000513341 ENAMQ9NRM1 1142 aa7.84□□□□□ -1.15
PDLIM5-218ENST00000513341 MSTNO14793 375 aa7.83□□□□□ -1.16
PDLIM5-218ENST00000513341 MAP3K10Q02779 954 aa7.83□□□□□ -1.16
PDLIM5-218ENST00000513341 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
PDLIM5-218ENST00000513341 EIF4G1Q04637 1599 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-218ENST00000513341 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 CDC14CA4D256 554 aa7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 CELA2BP08218 269 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 DHX9Q08211 1270 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 CBLBQ13191 982 aa7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
PDLIM5-218ENST00000513341 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
PDLIM5-218ENST00000513341 PLA2G4EQ3MJ16 856 aa7.81□□□□□ -1.16
PDLIM5-218ENST00000513341 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
PDLIM5-218ENST00000513341 CABLES1Q8TDN4 633 aa7.81□□□□□ -1.16
PDLIM5-218ENST00000513341 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
PDLIM5-218ENST00000513341 DCAF5Q96JK2 942 aa7.8□□□□□ -1.16
PDLIM5-218ENST00000513341 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
PDLIM5-218ENST00000513341 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
PDLIM5-218ENST00000513341 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
PDLIM5-218ENST00000513341 ZMYND10O75800 440 aa7.79□□□□□ -1.16
PDLIM5-218ENST00000513341 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-218ENST00000513341 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
PDLIM5-218ENST00000513341 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
PDLIM5-218ENST00000513341 LILRB3O75022 631 aa7.78□□□□□ -1.16
PDLIM5-218ENST00000513341 ITGB2P05107 769 aa7.78□□□□□ -1.16
PDLIM5-218ENST00000513341 GAS6Q14393 721 aa7.78□□□□□ -1.16
PDLIM5-218ENST00000513341 BEND7Q8N7W2 519 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-218ENST00000513341 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
PDLIM5-218ENST00000513341 PROCP04070 461 aa7.77□□□□□ -1.17
PDLIM5-218ENST00000513341 HELBQ8NG08 1087 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-218ENST00000513341 KCTD15Q96SI1 283 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-218ENST00000513341 PARP9Q8IXQ6 854 aa7.76□□□□□ -1.17
PDLIM5-218ENST00000513341 INSM2Q96T92 566 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-218ENST00000513341 SLC10A4Q96EP9 437 aa7.75□□□□□ -1.17
PDLIM5-218ENST00000513341 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
PDLIM5-218ENST00000513341 CARD14Q9BXL6 1004 aa7.75□□□□□ -1.17
PDLIM5-218ENST00000513341 MBIPQ9NS73 344 aa7.75□□□□□ -1.17
PDLIM5-218ENST00000513341 ZC3H4Q9UPT8 1303 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-218ENST00000513341 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 QPCTQ16769 361 aa7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 POLMQ9NP87 494 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 CUX2O14529 1486 aa7.74□□□□□ -1.17
PDLIM5-218ENST00000513341 DCAF1Q9Y4B6 1507 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 RELBQ01201 579 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 MYSM1Q5VVJ2 828 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 PODNQ7Z5L7 613 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 TSC1Q92574 1164 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 LIMD1Q9UGP4 676 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 CNTNAP5Q8WYK1 1306 aa7.73□□□□□ -1.17
PDLIM5-218ENST00000513341 BCRP11274 1271 aa7.72□□□□□ -1.17
PDLIM5-218ENST00000513341 CSPP1Q1MSJ5 1256 aa7.72□□□□□ -1.17
PDLIM5-218ENST00000513341 FOXD4L5Q5VV16 416 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-218ENST00000513341 ADH1AP07327 375 aa7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 ALYREFQ86V81 257 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 TRIM22Q8IYM9 498 aa7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 GPSM3Q9Y4H4 160 aa7.71□□□□□ -1.18
PDLIM5-218ENST00000513341 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-218ENST00000513341 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
PDLIM5-218ENST00000513341 IGF1RP08069 1367 aa7.7□□□□□ -1.18
PDLIM5-218ENST00000513341 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 PTGIRP43119 386 aa7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 HAP1P54257 671 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 FOXR1Q6PIV2 292 aa7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 ZBTB33Q86T24 672 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms