RNA–Protein interactions for RNA: ENST00000509673.2

PGBD4P4-201, Transcript of piggyBac transposable element derived 4 pseudogene 4, humanhuman

BASIC

Gene PGBD4P4, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P4-201ENST00000509673 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
PGBD4P4-201ENST00000509673 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
PGBD4P4-201ENST00000509673 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
PGBD4P4-201ENST00000509673 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
PGBD4P4-201ENST00000509673 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.97
PGBD4P4-201ENST00000509673 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
PGBD4P4-201ENST00000509673 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
PGBD4P4-201ENST00000509673 Q6ZVU0 165 aa9.01□□□□□ -0.97
PGBD4P4-201ENST00000509673 SPINT1O43278 529 aa9□□□□□ -0.97
PGBD4P4-201ENST00000509673 PTSQ03393 145 aa9□□□□□ -0.97
PGBD4P4-201ENST00000509673 POLR3EQ9NVU0 708 aa9□□□□□ -0.97
PGBD4P4-201ENST00000509673 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
PGBD4P4-201ENST00000509673 RNF225M0QZC1 329 aaPredicted RBP8.99□□□□□ -0.97
PGBD4P4-201ENST00000509673 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
PGBD4P4-201ENST00000509673 NANOS1Q8WY41 292 aaKnown RBP8.99□□□□□ -0.97
PGBD4P4-201ENST00000509673 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
PGBD4P4-201ENST00000509673 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
PGBD4P4-201ENST00000509673 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
PGBD4P4-201ENST00000509673 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
PGBD4P4-201ENST00000509673 GPSM3Q9Y4H4 160 aa8.98□□□□□ -0.97
PGBD4P4-201ENST00000509673 PTK2Q05397 1052 aa8.97□□□□□ -0.97
PGBD4P4-201ENST00000509673 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
PGBD4P4-201ENST00000509673 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 CBLBQ13191 982 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 NBPF20Q3BBV1 942 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 CNTNAP3BQ96NU0 1288 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 CNTNAP3Q9BZ76 1288 aa8.95□□□□□ -0.98
PGBD4P4-201ENST00000509673 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
PGBD4P4-201ENST00000509673 TMEM151AQ8N4L1 468 aa8.94□□□□□ -0.98
PGBD4P4-201ENST00000509673 COL25A1Q9BXS0 654 aaPredicted RBP8.94□□□□□ -0.98
PGBD4P4-201ENST00000509673 KRT76Q01546 638 aa8.93□□□□□ -0.98
PGBD4P4-201ENST00000509673 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
PGBD4P4-201ENST00000509673 LRRN4Q8WUT4 740 aa8.93□□□□□ -0.98
PGBD4P4-201ENST00000509673 SLC35F4A4IF30 521 aa8.92□□□□□ -0.98
PGBD4P4-201ENST00000509673 ITGA6P23229 1130 aa8.92□□□□□ -0.98
PGBD4P4-201ENST00000509673 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
PGBD4P4-201ENST00000509673 INTS6LQ5JSJ4 861 aaKnown RBP8.92□□□□□ -0.98
PGBD4P4-201ENST00000509673 NR6A1Q15406 480 aa8.91□□□□□ -0.98
PGBD4P4-201ENST00000509673 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
PGBD4P4-201ENST00000509673 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
PGBD4P4-201ENST00000509673 ADAMTS8Q9UP79 889 aa8.91□□□□□ -0.98
PGBD4P4-201ENST00000509673 GDF11O95390 407 aa8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 RELBQ01201 579 aa8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 ADAM32Q8TC27 787 aa8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 POLMQ9NP87 494 aaPredicted RBP8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 ATP1B4Q9UN42 357 aaPredicted RBP8.9□□□□□ -0.98
PGBD4P4-201ENST00000509673 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 GSK3AP49840 483 aa8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 RASSF7Q02833 373 aa8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 AGBL1Q96MI9 1066 aa8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 INSM2Q96T92 566 aaPredicted RBP8.89□□□□□ -0.99
PGBD4P4-201ENST00000509673 CDC14CA4D256 554 aa8.88□□□□□ -0.99
PGBD4P4-201ENST00000509673 SLURP2P0DP57 97 aa8.88□□□□□ -0.99
PGBD4P4-201ENST00000509673 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.88□□□□□ -0.99
PGBD4P4-201ENST00000509673 ZNF385CQ66K41 422 aaPredicted RBP8.87□□□□□ -0.99
PGBD4P4-201ENST00000509673 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
PGBD4P4-201ENST00000509673 RNF217Q8TC41 542 aa8.87□□□□□ -0.99
PGBD4P4-201ENST00000509673 LOC100996750A0A140TA64 210 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 AP1G2O75843 785 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 ADH1AP07327 375 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 DZIP3Q86Y13 1208 aaKnown RBP8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 OCSTAMPQ9BR26 566 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 KRTAP4-6Q9BYQ5 205 aa8.86□□□□□ -0.99
PGBD4P4-201ENST00000509673 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
PGBD4P4-201ENST00000509673 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
PGBD4P4-201ENST00000509673 ZNF395Q9H8N7 513 aaPredicted RBP8.85□□□□□ -0.99
PGBD4P4-201ENST00000509673 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
PGBD4P4-201ENST00000509673 PROCA1Q8NCQ7 364 aaPredicted RBP8.84□□□□□ -0.99
PGBD4P4-201ENST00000509673 PTGIRP43119 386 aa8.83□□□□□ -1
PGBD4P4-201ENST00000509673 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
PGBD4P4-201ENST00000509673 KANK3Q6NY19 840 aa8.83□□□□□ -1
PGBD4P4-201ENST00000509673 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
PGBD4P4-201ENST00000509673 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
PGBD4P4-201ENST00000509673 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
PGBD4P4-201ENST00000509673 ARHGEF15O94989 841 aa8.82□□□□□ -1
PGBD4P4-201ENST00000509673 RAB15P59190 212 aa8.82□□□□□ -1
PGBD4P4-201ENST00000509673 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
PGBD4P4-201ENST00000509673 CCDC125Q86Z20 511 aa8.82□□□□□ -1
PGBD4P4-201ENST00000509673 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
PGBD4P4-201ENST00000509673 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
PGBD4P4-201ENST00000509673 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 ESPNB1AK53 854 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 LILRA1O75019 489 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 IGHA1P01876 353 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 USP17L8P0C7I0 530 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 MAP3K10Q02779 954 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 SRSF11Q05519 484 aaKnown RBP8.81□□□□□ -1
PGBD4P4-201ENST00000509673 GMCL1Q96IK5 515 aa8.81□□□□□ -1
PGBD4P4-201ENST00000509673 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
PGBD4P4-201ENST00000509673 ADAMTS2O95450 1211 aa8.79□□□□□ -1
PGBD4P4-201ENST00000509673 FOXK2Q01167 660 aa8.79□□□□□ -1
PGBD4P4-201ENST00000509673 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
PGBD4P4-201ENST00000509673 FOXR1Q6PIV2 292 aa8.79□□□□□ -1
PGBD4P4-201ENST00000509673 WHAMMQ8TF30 809 aa8.79□□□□□ -1
PGBD4P4-201ENST00000509673 FAM117AQ9C073 453 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms