RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 COL18A1P39060 1754 aa14.47□□□□□ -0.09
SKI-204ENST00000508416 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
SKI-204ENST00000508416 LMO7Q8WWI1 1683 aa14.47□□□□□ -0.09
SKI-204ENST00000508416 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
SKI-204ENST00000508416 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
SKI-204ENST00000508416 LARP1Q6PKG0 1096 aaKnown RBP14.45□□□□□ -0.1
SKI-204ENST00000508416 MAP3K19Q56UN5 1328 aa14.44□□□□□ -0.1
SKI-204ENST00000508416 AMPHP49418 695 aa14.44□□□□□ -0.1
SKI-204ENST00000508416 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
SKI-204ENST00000508416 IP6K1Q92551 441 aa14.44□□□□□ -0.1
SKI-204ENST00000508416 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
SKI-204ENST00000508416 SPATA31A5Q5VU36 1347 aa14.43□□□□□ -0.1
SKI-204ENST00000508416 SPATA31A7Q8IWB4 1347 aa14.43□□□□□ -0.1
SKI-204ENST00000508416 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
SKI-204ENST00000508416 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
SKI-204ENST00000508416 MORC1Q86VD1 984 aa14.43□□□□□ -0.1
SKI-204ENST00000508416 NSD2O96028 1365 aa14.43□□□□□ -0.1
SKI-204ENST00000508416 COL5A2P05997 1499 aaPredicted RBP14.43□□□□□ -0.1
SKI-204ENST00000508416 MAP2P11137 1827 aaKnown RBP14.43□□□□□ -0.1
SKI-204ENST00000508416 GLI3P10071 1580 aa14.43□□□□□ -0.1
SKI-204ENST00000508416 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
SKI-204ENST00000508416 USP35Q9P2H5 1018 aa14.42□□□□□ -0.1
SKI-204ENST00000508416 SPATA31A1Q5TZJ5 1347 aa14.41□□□□□ -0.1
SKI-204ENST00000508416 HOXC9P31274 260 aa14.41□□□□□ -0.1
SKI-204ENST00000508416 CC2D1BQ5T0F9 858 aaKnown RBP14.41□□□□□ -0.1
SKI-204ENST00000508416 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
SKI-204ENST00000508416 CDK12Q9NYV4 1490 aaPredicted RBP14.41□□□□□ -0.1
SKI-204ENST00000508416 ABCC6O95255 1503 aa14.41□□□□□ -0.1
SKI-204ENST00000508416 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
SKI-204ENST00000508416 ONECUT3O60422 494 aaPredicted RBP14.4□□□□□ -0.1
SKI-204ENST00000508416 CNGB1Q14028 1251 aaPredicted RBP14.4□□□□□ -0.1
SKI-204ENST00000508416 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
SKI-204ENST00000508416 ANKRD24Q8TF21 1146 aa14.4□□□□□ -0.1
SKI-204ENST00000508416 LTV1Q96GA3 475 aaPredicted RBP14.4□□□□□ -0.1
SKI-204ENST00000508416 SRCAPQ6ZRS2 3230 aa14.39□□□□□ -0.11
SKI-204ENST00000508416 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
SKI-204ENST00000508416 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
SKI-204ENST00000508416 EMILIN1Q9Y6C2 1016 aa14.39□□□□□ -0.11
SKI-204ENST00000508416 RGS12O14924 1447 aa14.39□□□□□ -0.11
SKI-204ENST00000508416 BLMP54132 1417 aaPredicted RBP14.39□□□□□ -0.11
SKI-204ENST00000508416 CRB1P82279 1406 aa14.39□□□□□ -0.11
SKI-204ENST00000508416 A0A0G2JS52 829 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 MYT1Q01538 1121 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
SKI-204ENST00000508416 HSP90AB2PQ58FF8 381 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 SEPT12Q8IYM1 358 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 POLKQ9UBT6 870 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 ERBB3P21860 1342 aa14.38□□□□□ -0.11
SKI-204ENST00000508416 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
SKI-204ENST00000508416 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
SKI-204ENST00000508416 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
SKI-204ENST00000508416 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
SKI-204ENST00000508416 RTL1A6NKG5 1358 aa14.36□□□□□ -0.11
SKI-204ENST00000508416 FLT4P35916 1363 aa14.36□□□□□ -0.11
SKI-204ENST00000508416 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
SKI-204ENST00000508416 NPC1L1Q9UHC9 1359 aa14.36□□□□□ -0.11
SKI-204ENST00000508416 PEAK1Q9H792 1746 aa14.36□□□□□ -0.11
SKI-204ENST00000508416 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
SKI-204ENST00000508416 BRWD3Q6RI45 1802 aa14.35□□□□□ -0.11
SKI-204ENST00000508416 INSRP06213 1382 aa14.34□□□□□ -0.11
SKI-204ENST00000508416 RGPD2P0DJD1 1756 aa14.34□□□□□ -0.11
SKI-204ENST00000508416 KRT27Q7Z3Y8 459 aa14.32□□□□□ -0.12
SKI-204ENST00000508416 FAM208AQ9UK61 1670 aaKnown RBP14.32□□□□□ -0.12
SKI-204ENST00000508416 THSD7AQ9UPZ6 1657 aa14.32□□□□□ -0.12
SKI-204ENST00000508416 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
SKI-204ENST00000508416 MTHFSP49914 203 aa14.31□□□□□ -0.12
SKI-204ENST00000508416 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
SKI-204ENST00000508416 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
SKI-204ENST00000508416 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
SKI-204ENST00000508416 IL2RBP14784 551 aa14.29□□□□□ -0.12
SKI-204ENST00000508416 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
SKI-204ENST00000508416 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
SKI-204ENST00000508416 DDB1Q16531 1140 aa14.29□□□□□ -0.12
SKI-204ENST00000508416 WNK3Q9BYP7 1800 aa14.29□□□□□ -0.12
SKI-204ENST00000508416 EXOC5O00471 708 aa14.28□□□□□ -0.12
SKI-204ENST00000508416 USHBP1Q8N6Y0 703 aa14.28□□□□□ -0.12
SKI-204ENST00000508416 PARP4Q9UKK3 1724 aaKnown RBP14.28□□□□□ -0.12
SKI-204ENST00000508416 DISP2A7MBM2 1401 aa14.27□□□□□ -0.12
SKI-204ENST00000508416 FAM182BQ5T319 152 aa14.27□□□□□ -0.13
SKI-204ENST00000508416 EYA1Q99502 592 aa14.27□□□□□ -0.13
SKI-204ENST00000508416 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
SKI-204ENST00000508416 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
SKI-204ENST00000508416 LRRC37A3O60309 1634 aa14.24□□□□□ -0.13
SKI-204ENST00000508416 IL13P35225 146 aa14.24□□□□□ -0.13
SKI-204ENST00000508416 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
SKI-204ENST00000508416 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
SKI-204ENST00000508416 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
SKI-204ENST00000508416 RALBP1Q15311 655 aa14.23□□□□□ -0.13
SKI-204ENST00000508416 FAM196AQ6ZSG2 479 aa14.23□□□□□ -0.13
SKI-204ENST00000508416 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
SKI-204ENST00000508416 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
SKI-204ENST00000508416 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
SKI-204ENST00000508416 MEGF6O75095 1541 aa14.21□□□□□ -0.13
SKI-204ENST00000508416 IGSF1Q8N6C5 1336 aa14.21□□□□□ -0.13
SKI-204ENST00000508416 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
SKI-204ENST00000508416 EP400Q96L91 3159 aa14.21□□□□□ -0.14
SKI-204ENST00000508416 CCDC125Q86Z20 511 aa14.2□□□□□ -0.14
SKI-204ENST00000508416 NCAPD2Q15021 1401 aa14.2□□□□□ -0.14
SKI-204ENST00000508416 TNS2Q63HR2 1409 aa14.2□□□□□ -0.14
SKI-204ENST00000508416 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms