RNA–Protein interactions for RNA: ENST00000508394.6

SMUG1-215, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, human

APPRIS P1 TSL 2 BASIC

Gene SMUG1, Length 1,697 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMUG1-215	ENST00000508394	HOXC9	P31274	260 aa		29.44	■■■□□ 2.3
SMUG1-215	ENST00000508394	NWD2	Q9ULI1	1742 aa		29.43	■■■□□ 2.3
SMUG1-215	ENST00000508394	PRKRIP1	Q9H875	184 aa	Predicted RBP	29.43	■■■□□ 2.3
SMUG1-215	ENST00000508394	STRN4	Q9NRL3	753 aa		29.43	■■■□□ 2.3
SMUG1-215	ENST00000508394	PPP2R1A	P30153	589 aa		29.42	■■■□□ 2.3
SMUG1-215	ENST00000508394	MTHFS	P49914	203 aa		29.42	■■■□□ 2.3
SMUG1-215	ENST00000508394	RALBP1	Q15311	655 aa		29.42	■■■□□ 2.3
SMUG1-215	ENST00000508394	IP6K1	Q92551	441 aa		29.42	■■■□□ 2.3
SMUG1-215	ENST00000508394	NRAP	Q86VF7	1730 aa		29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	HSP90AB2P	Q58FF8	381 aa		29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	LTV1	Q96GA3	475 aa	Predicted RBP	29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	USP21	Q9UK80	565 aa		29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	FLT4	P35916	1363 aa		29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	RTL1	A6NKG5	1358 aa		29.41	■■■□□ 2.3
SMUG1-215	ENST00000508394	PHF23	Q9BUL5	403 aa	Predicted RBP	29.4	■■■□□ 2.3
SMUG1-215	ENST00000508394	SMG6	Q86US8	1419 aa	Known RBP	29.39	■■■□□ 2.3
SMUG1-215	ENST00000508394	BCL9L	Q86UU0	1499 aa		29.39	■■■□□ 2.3
SMUG1-215	ENST00000508394	ANP32C	O43423	234 aa		29.39	■■■□□ 2.3
SMUG1-215	ENST00000508394	ABCC6	O95255	1503 aa		29.39	■■■□□ 2.3
SMUG1-215	ENST00000508394	COL5A2	P05997	1499 aa	Predicted RBP	29.39	■■■□□ 2.29
SMUG1-215	ENST00000508394	EVA1C	P58658	441 aa		29.38	■■■□□ 2.29
SMUG1-215	ENST00000508394	DIEXF	Q68CQ4	756 aa	Known RBP	29.38	■■■□□ 2.29
SMUG1-215	ENST00000508394	UNC5CL	Q8IV45	518 aa		29.37	■■■□□ 2.29
SMUG1-215	ENST00000508394	BLM	P54132	1417 aa	Predicted RBP	29.36	■■■□□ 2.29
SMUG1-215	ENST00000508394	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.36	■■■□□ 2.29
SMUG1-215	ENST00000508394	KIF24	Q5T7B8	1368 aa		29.36	■■■□□ 2.29
SMUG1-215	ENST00000508394	CSB-PGBD3	P0DP91	1061 aa		29.35	■■■□□ 2.29
SMUG1-215	ENST00000508394	ANKRD24	Q8TF21	1146 aa		29.35	■■■□□ 2.29
SMUG1-215	ENST00000508394	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	29.34	■■■□□ 2.29
SMUG1-215	ENST00000508394	LARP1	Q6PKG0	1096 aa	Known RBP	29.34	■■■□□ 2.29
SMUG1-215	ENST00000508394	ERBB3	P21860	1342 aa		29.34	■■■□□ 2.29
SMUG1-215	ENST00000508394	MYBBP1A	Q9BQG0	1328 aa	Known RBP	29.34	■■■□□ 2.29
SMUG1-215	ENST00000508394	INSR	P06213	1382 aa		29.33	■■■□□ 2.29
SMUG1-215	ENST00000508394	CCDC9	Q9Y3X0	531 aa	Known RBP	29.33	■■■□□ 2.29
SMUG1-215	ENST00000508394	RGPD2	P0DJD1	1756 aa		29.32	■■■□□ 2.28
SMUG1-215	ENST00000508394	RGS17	Q9UGC6	210 aa	Predicted RBP	29.31	■■■□□ 2.28
SMUG1-215	ENST00000508394	ZNF772	Q68DY9	489 aa	Predicted RBP	29.3	■■■□□ 2.28
SMUG1-215	ENST00000508394	USP35	Q9P2H5	1018 aa		29.3	■■■□□ 2.28
SMUG1-215	ENST00000508394	WDR17	Q8IZU2	1322 aa		29.29	■■■□□ 2.28
SMUG1-215	ENST00000508394	TOM1L2	Q6ZVM7	507 aa		29.29	■■■□□ 2.28
SMUG1-215	ENST00000508394	EIF4A2	Q14240	407 aa	Known RBP	29.28	■■■□□ 2.28
SMUG1-215	ENST00000508394	QTRT2	Q9H974	415 aa	Known RBP	29.28	■■■□□ 2.28
SMUG1-215	ENST00000508394	NLRP2	Q9NX02	1062 aa		29.28	■■■□□ 2.28
SMUG1-215	ENST00000508394	TRPC5	Q9UL62	973 aa	Predicted RBP	29.27	■■■□□ 2.28
SMUG1-215	ENST00000508394	ATRN	O75882	1429 aa		29.26	■■■□□ 2.27
SMUG1-215	ENST00000508394	COL3A1	P02461	1466 aa	Predicted RBP	29.25	■■■□□ 2.27
SMUG1-215	ENST00000508394	VPS72	Q15906	364 aa		29.25	■■■□□ 2.27
SMUG1-215	ENST00000508394	CFAP53	Q96M91	514 aa		29.25	■■■□□ 2.27
SMUG1-215	ENST00000508394	CRB1	P82279	1406 aa		29.25	■■■□□ 2.27
SMUG1-215	ENST00000508394	FAM208A	Q9UK61	1670 aa	Known RBP	29.24	■■■□□ 2.27
SMUG1-215	ENST00000508394	USHBP1	Q8N6Y0	703 aa		29.23	■■■□□ 2.27
SMUG1-215	ENST00000508394	POTEA	Q6S8J7	498 aa		29.22	■■■□□ 2.27
SMUG1-215	ENST00000508394	SPATA31A5	Q5VU36	1347 aa		29.22	■■■□□ 2.27
SMUG1-215	ENST00000508394	SPATA31A7	Q8IWB4	1347 aa		29.22	■■■□□ 2.27
SMUG1-215	ENST00000508394	DIAPH1	O60610	1272 aa	Known RBP	29.21	■■■□□ 2.27
SMUG1-215	ENST00000508394	NBPF6	Q5VWK0	638 aa		29.21	■■■□□ 2.27
SMUG1-215	ENST00000508394	NBPF4	Q96M43	638 aa		29.21	■■■□□ 2.27
SMUG1-215	ENST00000508394	SPATA31A1	Q5TZJ5	1347 aa		29.2	■■■□□ 2.27
SMUG1-215	ENST00000508394	GLI3	P10071	1580 aa		29.2	■■■□□ 2.27
SMUG1-215	ENST00000508394	IL13	P35225	146 aa		29.2	■■■□□ 2.26
SMUG1-215	ENST00000508394	GJD4	Q96KN9	370 aa	Predicted RBP	29.2	■■■□□ 2.26
SMUG1-215	ENST00000508394	EYA1	Q99502	592 aa		29.19	■■■□□ 2.26
SMUG1-215	ENST00000508394	CCDC184	Q52MB2	194 aa		29.18	■■■□□ 2.26
SMUG1-215	ENST00000508394	CARD10	Q9BWT7	1032 aa		29.18	■■■□□ 2.26
SMUG1-215	ENST00000508394	U2SURP	O15042	1029 aa	Known RBP	29.17	■■■□□ 2.26
SMUG1-215	ENST00000508394	FAM98C	Q17RN3	349 aa	Known RBP	29.15	■■■□□ 2.26
SMUG1-215	ENST00000508394	TCP11L2	Q8N4U5	519 aa		29.15	■■■□□ 2.26
SMUG1-215	ENST00000508394	RGPD1	P0DJD0	1748 aa		29.15	■■■□□ 2.26
SMUG1-215	ENST00000508394	MIER1	Q8N108	512 aa		29.13	■■■□□ 2.25
SMUG1-215	ENST00000508394	RXRB	P28702	533 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	RBM6	P78332	1123 aa	Known RBP	29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	IGSF1	Q8N6C5	1336 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	WNK3	Q9BYP7	1800 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394		A0A0G2JS52	829 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	MYT1	Q01538	1121 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	AEBP1	Q8IUX7	1158 aa		29.12	■■■□□ 2.25
SMUG1-215	ENST00000508394	HMOX1	P09601	288 aa		29.11	■■■□□ 2.25
SMUG1-215	ENST00000508394	MRS2	Q9HD23	443 aa		29.11	■■■□□ 2.25
SMUG1-215	ENST00000508394	SULT6B1	Q6IMI4	303 aa		29.1	■■■□□ 2.25
SMUG1-215	ENST00000508394	NUDC	Q9Y266	331 aa		29.1	■■■□□ 2.25
SMUG1-215	ENST00000508394	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.09	■■■□□ 2.25
SMUG1-215	ENST00000508394	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
SMUG1-215	ENST00000508394	THRAP3	Q9Y2W1	955 aa	Known RBP	29.09	■■■□□ 2.25
SMUG1-215	ENST00000508394	NCAPD2	Q15021	1401 aa		29.07	■■■□□ 2.24
SMUG1-215	ENST00000508394	MEGF6	O75095	1541 aa		29.06	■■■□□ 2.24
SMUG1-215	ENST00000508394	BARGIN	Q6ZT62	677 aa		29.05	■■■□□ 2.24
SMUG1-215	ENST00000508394	IL2RB	P14784	551 aa		29.05	■■■□□ 2.24
SMUG1-215	ENST00000508394	RAPGEF4	Q8WZA2	1011 aa		29.04	■■■□□ 2.24
SMUG1-215	ENST00000508394	DISP2	A7MBM2	1401 aa		29.03	■■■□□ 2.24
SMUG1-215	ENST00000508394	THSD7A	Q9UPZ6	1657 aa		29.03	■■■□□ 2.24
SMUG1-215	ENST00000508394	SEPT12	Q8IYM1	358 aa		29.02	■■■□□ 2.24
SMUG1-215	ENST00000508394	PARP4	Q9UKK3	1724 aa	Known RBP	29.02	■■■□□ 2.24
SMUG1-215	ENST00000508394	WDR43	Q15061	677 aa	Known RBP eCLIP	29.02	■■■□□ 2.24
SMUG1-215	ENST00000508394	RGS12	O14924	1447 aa		29.01	■■■□□ 2.24
SMUG1-215	ENST00000508394	KDR	P35968	1356 aa		29.01	■■■□□ 2.23
SMUG1-215	ENST00000508394	LRRC37A3	O60309	1634 aa		29	■■■□□ 2.23
SMUG1-215	ENST00000508394	TAT	P17735	454 aa	Predicted RBP	29	■■■□□ 2.23
SMUG1-215	ENST00000508394	BRWD3	Q6RI45	1802 aa		28.99	■■■□□ 2.23
SMUG1-215	ENST00000508394	ONECUT3	O60422	494 aa	Predicted RBP	28.99	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms