RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.3
SRPK1-209ENST00000507909 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
SRPK1-209ENST00000507909 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
SRPK1-209ENST00000507909 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
SRPK1-209ENST00000507909 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
SRPK1-209ENST00000507909 IP6K1Q92551 441 aa13.2□□□□□ -0.3
SRPK1-209ENST00000507909 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
SRPK1-209ENST00000507909 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
SRPK1-209ENST00000507909 HOXC9P31274 260 aa13.19□□□□□ -0.3
SRPK1-209ENST00000507909 MTHFSP49914 203 aa13.19□□□□□ -0.3
SRPK1-209ENST00000507909 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
SRPK1-209ENST00000507909 INSRP06213 1382 aa13.18□□□□□ -0.3
SRPK1-209ENST00000507909 SLIT2O94813 1529 aa13.18□□□□□ -0.3
SRPK1-209ENST00000507909 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
SRPK1-209ENST00000507909 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
SRPK1-209ENST00000507909 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
SRPK1-209ENST00000507909 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
SRPK1-209ENST00000507909 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
SRPK1-209ENST00000507909 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
SRPK1-209ENST00000507909 ERBB3P21860 1342 aa13.15□□□□□ -0.3
SRPK1-209ENST00000507909 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
SRPK1-209ENST00000507909 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
SRPK1-209ENST00000507909 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
SRPK1-209ENST00000507909 EVA1CP58658 441 aa13.13□□□□□ -0.31
SRPK1-209ENST00000507909 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
SRPK1-209ENST00000507909 AFF2P51816 1311 aa13.13□□□□□ -0.31
SRPK1-209ENST00000507909 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
SRPK1-209ENST00000507909 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
SRPK1-209ENST00000507909 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
SRPK1-209ENST00000507909 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
SRPK1-209ENST00000507909 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
SRPK1-209ENST00000507909 USP21Q9UK80 565 aa13.12□□□□□ -0.31
SRPK1-209ENST00000507909 WDR17Q8IZU2 1322 aa13.12□□□□□ -0.31
SRPK1-209ENST00000507909 IL13P35225 146 aa13.11□□□□□ -0.31
SRPK1-209ENST00000507909 MIER1Q8N108 512 aa13.11□□□□□ -0.31
SRPK1-209ENST00000507909 RGPD2P0DJD1 1756 aa13.11□□□□□ -0.31
SRPK1-209ENST00000507909 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
SRPK1-209ENST00000507909 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
SRPK1-209ENST00000507909 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
SRPK1-209ENST00000507909 CRB1P82279 1406 aa13.1□□□□□ -0.31
SRPK1-209ENST00000507909 ATRNO75882 1429 aa13.09□□□□□ -0.31
SRPK1-209ENST00000507909 VPS72Q15906 364 aa13.09□□□□□ -0.31
SRPK1-209ENST00000507909 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
SRPK1-209ENST00000507909 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
SRPK1-209ENST00000507909 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
SRPK1-209ENST00000507909 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
SRPK1-209ENST00000507909 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
SRPK1-209ENST00000507909 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
SRPK1-209ENST00000507909 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
SRPK1-209ENST00000507909 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
SRPK1-209ENST00000507909 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
SRPK1-209ENST00000507909 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
SRPK1-209ENST00000507909 EYA1Q99502 592 aa13.07□□□□□ -0.32
SRPK1-209ENST00000507909 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
SRPK1-209ENST00000507909 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
SRPK1-209ENST00000507909 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
SRPK1-209ENST00000507909 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
SRPK1-209ENST00000507909 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
SRPK1-209ENST00000507909 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
SRPK1-209ENST00000507909 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
SRPK1-209ENST00000507909 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
SRPK1-209ENST00000507909 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
SRPK1-209ENST00000507909 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
SRPK1-209ENST00000507909 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
SRPK1-209ENST00000507909 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
SRPK1-209ENST00000507909 WDR43Q15061 677 aaKnown RBP eCLIP13.05□□□□□ -0.32
SRPK1-209ENST00000507909 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
SRPK1-209ENST00000507909 KDRP35968 1356 aa13.05□□□□□ -0.32
SRPK1-209ENST00000507909 SULT6B1Q6IMI4 303 aa13.04□□□□□ -0.32
SRPK1-209ENST00000507909 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
SRPK1-209ENST00000507909 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
SRPK1-209ENST00000507909 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
SRPK1-209ENST00000507909 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
SRPK1-209ENST00000507909 GLI3P10071 1580 aa13.03□□□□□ -0.32
SRPK1-209ENST00000507909 PARP4Q9UKK3 1724 aaKnown RBP13.03□□□□□ -0.32
SRPK1-209ENST00000507909 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
SRPK1-209ENST00000507909 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
SRPK1-209ENST00000507909 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
SRPK1-209ENST00000507909 PLEKHG2Q9H7P9 1386 aa13.03□□□□□ -0.32
SRPK1-209ENST00000507909 HMOX1P09601 288 aa13.02□□□□□ -0.33
SRPK1-209ENST00000507909 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
SRPK1-209ENST00000507909 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
SRPK1-209ENST00000507909 FCHSD2O94868 740 aa13.01□□□□□ -0.33
SRPK1-209ENST00000507909 IL2RBP14784 551 aa13.01□□□□□ -0.33
SRPK1-209ENST00000507909 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
SRPK1-209ENST00000507909 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
SRPK1-209ENST00000507909 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
SRPK1-209ENST00000507909 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
SRPK1-209ENST00000507909 MEGF6O75095 1541 aa13.01□□□□□ -0.33
SRPK1-209ENST00000507909 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
SRPK1-209ENST00000507909 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
SRPK1-209ENST00000507909 TATP17735 454 aaPredicted RBP13□□□□□ -0.33
SRPK1-209ENST00000507909 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
SRPK1-209ENST00000507909 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
SRPK1-209ENST00000507909 PKD1L3Q7Z443 1732 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms