RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PEAK1Q9H792 1746 aa17.48■□□□□ 0.39
TCOF1-210ENST00000506767 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-210ENST00000506767 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
TCOF1-210ENST00000506767 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
TCOF1-210ENST00000506767 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
TCOF1-210ENST00000506767 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
TCOF1-210ENST00000506767 UNC5CLQ8IV45 518 aa17.47■□□□□ 0.39
TCOF1-210ENST00000506767 IP6K1Q92551 441 aa17.47■□□□□ 0.39
TCOF1-210ENST00000506767 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
TCOF1-210ENST00000506767 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
TCOF1-210ENST00000506767 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
TCOF1-210ENST00000506767 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
TCOF1-210ENST00000506767 HOXC9P31274 260 aa17.46■□□□□ 0.39
TCOF1-210ENST00000506767 USP21Q9UK80 565 aa17.46■□□□□ 0.39
TCOF1-210ENST00000506767 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
TCOF1-210ENST00000506767 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
TCOF1-210ENST00000506767 AMPHP49418 695 aa17.45■□□□□ 0.38
TCOF1-210ENST00000506767 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
TCOF1-210ENST00000506767 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
TCOF1-210ENST00000506767 FLT4P35916 1363 aa17.44■□□□□ 0.38
TCOF1-210ENST00000506767 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
TCOF1-210ENST00000506767 ATRNO75882 1429 aa17.43■□□□□ 0.38
TCOF1-210ENST00000506767 INSRP06213 1382 aa17.42■□□□□ 0.38
TCOF1-210ENST00000506767 RALBP1Q15311 655 aa17.42■□□□□ 0.38
TCOF1-210ENST00000506767 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
TCOF1-210ENST00000506767 VPS72Q15906 364 aa17.41■□□□□ 0.38
TCOF1-210ENST00000506767 HSP90AB2PQ58FF8 381 aa17.41■□□□□ 0.38
TCOF1-210ENST00000506767 TRPC5Q9UL62 973 aaPredicted RBP17.41■□□□□ 0.38
TCOF1-210ENST00000506767 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
TCOF1-210ENST00000506767 ERBB3P21860 1342 aa17.41■□□□□ 0.38
TCOF1-210ENST00000506767 MTHFSP49914 203 aa17.4■□□□□ 0.38
TCOF1-210ENST00000506767 EVA1CP58658 441 aa17.4■□□□□ 0.38
TCOF1-210ENST00000506767 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
TCOF1-210ENST00000506767 QTRT2Q9H974 415 aaKnown RBP17.4■□□□□ 0.38
TCOF1-210ENST00000506767 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
TCOF1-210ENST00000506767 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
TCOF1-210ENST00000506767 PPM1GO15355 546 aaPredicted RBP17.39■□□□□ 0.37
TCOF1-210ENST00000506767 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
TCOF1-210ENST00000506767 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
TCOF1-210ENST00000506767 RXRBP28702 533 aa17.38■□□□□ 0.37
TCOF1-210ENST00000506767 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
TCOF1-210ENST00000506767 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
TCOF1-210ENST00000506767 FAM208AQ9UK61 1670 aaKnown RBP17.38■□□□□ 0.37
TCOF1-210ENST00000506767 CRB1P82279 1406 aa17.38■□□□□ 0.37
TCOF1-210ENST00000506767 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
TCOF1-210ENST00000506767 GLI3P10071 1580 aa17.36■□□□□ 0.37
TCOF1-210ENST00000506767 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
TCOF1-210ENST00000506767 TOM1L2Q6ZVM7 507 aa17.35■□□□□ 0.37
TCOF1-210ENST00000506767 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-210ENST00000506767 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
TCOF1-210ENST00000506767 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-210ENST00000506767 RGPD2P0DJD1 1756 aa17.35■□□□□ 0.37
TCOF1-210ENST00000506767 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
TCOF1-210ENST00000506767 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
TCOF1-210ENST00000506767 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
TCOF1-210ENST00000506767 CARD10Q9BWT7 1032 aa17.34■□□□□ 0.37
TCOF1-210ENST00000506767 ANP32CO43423 234 aa17.32■□□□□ 0.36
TCOF1-210ENST00000506767 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-210ENST00000506767 IL13P35225 146 aa17.32■□□□□ 0.36
TCOF1-210ENST00000506767 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
TCOF1-210ENST00000506767 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
TCOF1-210ENST00000506767 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
TCOF1-210ENST00000506767 CCDC9Q9Y3X0 531 aaKnown RBP17.32■□□□□ 0.36
TCOF1-210ENST00000506767 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
TCOF1-210ENST00000506767 RGPD1P0DJD0 1748 aa17.31■□□□□ 0.36
TCOF1-210ENST00000506767 BARGINQ6ZT62 677 aa17.31■□□□□ 0.36
TCOF1-210ENST00000506767 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
TCOF1-210ENST00000506767 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
TCOF1-210ENST00000506767 EYA1Q99502 592 aa17.3■□□□□ 0.36
TCOF1-210ENST00000506767 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
TCOF1-210ENST00000506767 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
TCOF1-210ENST00000506767 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
TCOF1-210ENST00000506767 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
TCOF1-210ENST00000506767 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
TCOF1-210ENST00000506767 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.36
TCOF1-210ENST00000506767 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
TCOF1-210ENST00000506767 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
TCOF1-210ENST00000506767 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
TCOF1-210ENST00000506767 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
TCOF1-210ENST00000506767 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
TCOF1-210ENST00000506767 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
TCOF1-210ENST00000506767 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
TCOF1-210ENST00000506767 RGS12O14924 1447 aa17.24■□□□□ 0.35
TCOF1-210ENST00000506767 IL2RBP14784 551 aa17.24■□□□□ 0.35
TCOF1-210ENST00000506767 KDRP35968 1356 aa17.24■□□□□ 0.35
TCOF1-210ENST00000506767 SEPT12Q8IYM1 358 aa17.23■□□□□ 0.35
TCOF1-210ENST00000506767 MEGF6O75095 1541 aa17.22■□□□□ 0.35
TCOF1-210ENST00000506767 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
TCOF1-210ENST00000506767 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
TCOF1-210ENST00000506767 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
TCOF1-210ENST00000506767 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
TCOF1-210ENST00000506767 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
TCOF1-210ENST00000506767 BRWD3Q6RI45 1802 aa17.21■□□□□ 0.35
TCOF1-210ENST00000506767 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
TCOF1-210ENST00000506767 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
TCOF1-210ENST00000506767 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
TCOF1-210ENST00000506767 OVOS2A0A0G2JMS6 1433 aa17.2■□□□□ 0.34
TCOF1-210ENST00000506767 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
TCOF1-210ENST00000506767 HMOX1P09601 288 aa17.18■□□□□ 0.34
TCOF1-210ENST00000506767 DDB1Q16531 1140 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms