RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CDC14CA4D256 554 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 GRM5P41594 1212 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 FOXJ1Q92949 421 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
TRAPPC13-208ENST00000505553 PSMG3-AS1Q96PY0 264 aa7.17□□□□□ -1.26
TRAPPC13-208ENST00000505553 EMILIN1Q9Y6C2 1016 aa7.17□□□□□ -1.26
TRAPPC13-208ENST00000505553 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
TRAPPC13-208ENST00000505553 ITGA6P23229 1130 aa7.16□□□□□ -1.26
TRAPPC13-208ENST00000505553 SSTR3P32745 418 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-208ENST00000505553 MTMR2Q13614 643 aa7.16□□□□□ -1.26
TRAPPC13-208ENST00000505553 BPHLQ86WA6 291 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-208ENST00000505553 SLC35F4A4IF30 521 aa7.15□□□□□ -1.27
TRAPPC13-208ENST00000505553 ADAMTS2O95450 1211 aa7.15□□□□□ -1.27
TRAPPC13-208ENST00000505553 TTLL12Q14166 644 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-208ENST00000505553 DCAF5Q96JK2 942 aa7.15□□□□□ -1.27
TRAPPC13-208ENST00000505553 K7ELQ4 463 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-208ENST00000505553 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-208ENST00000505553 LYPD4Q6UWN0 246 aa7.14□□□□□ -1.27
TRAPPC13-208ENST00000505553 PODNQ7Z5L7 613 aa7.14□□□□□ -1.27
TRAPPC13-208ENST00000505553 FSHRP23945 695 aa7.13□□□□□ -1.27
TRAPPC13-208ENST00000505553 LYPD8Q6UX82 237 aa7.13□□□□□ -1.27
TRAPPC13-208ENST00000505553 BEND7Q8N7W2 519 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-208ENST00000505553 DDRGK1Q96HY6 314 aa7.12□□□□□ -1.27
TRAPPC13-208ENST00000505553 CELA2BP08218 269 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC13-208ENST00000505553 CCDC116Q8IYX3 515 aa7.11□□□□□ -1.27
TRAPPC13-208ENST00000505553 Q8N3U1 123 aa7.11□□□□□ -1.27
TRAPPC13-208ENST00000505553 MAP4K5Q9Y4K4 846 aa7.11□□□□□ -1.27
TRAPPC13-208ENST00000505553 SPINT1O43278 529 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 PROCP04070 461 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 AMHR2Q16671 573 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 VASH1Q7L8A9 365 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 SPIRE2Q8WWL2 714 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 NDUFV2P19404 249 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 FAM117AQ9C073 453 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
TRAPPC13-208ENST00000505553 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 FLIIQ13045 1269 aa7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 GIGYF2Q6Y7W6 1299 aaKnown RBP7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 ARMC2Q8NEN0 867 aa7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 PODXL2Q9NZ53 605 aa7.09□□□□□ -1.28
TRAPPC13-208ENST00000505553 MOXD2PA6NHM9 499 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 F12P00748 615 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 UBTFP17480 764 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 DIXDC1Q155Q3 683 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 BEGAINQ9BUH8 593 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 C1QTNF2Q9BXJ5 285 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 MAP10Q9P2G4 905 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 CNTNAP5Q8WYK1 1306 aa7.08□□□□□ -1.28
TRAPPC13-208ENST00000505553 ITGB2P05107 769 aa7.07□□□□□ -1.28
TRAPPC13-208ENST00000505553 Q6ZVU0 165 aa7.07□□□□□ -1.28
TRAPPC13-208ENST00000505553 NEDD1Q8NHV4 660 aa7.07□□□□□ -1.28
TRAPPC13-208ENST00000505553 TRMT44Q8IYL2 757 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-208ENST00000505553 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
TRAPPC13-208ENST00000505553 GJA5P36382 358 aa7.05□□□□□ -1.28
TRAPPC13-208ENST00000505553 NBPF14Q5TI25 921 aa7.05□□□□□ -1.28
TRAPPC13-208ENST00000505553 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
TRAPPC13-208ENST00000505553 BAG6P46379 1132 aa7.04□□□□□ -1.28
TRAPPC13-208ENST00000505553 CBLBQ13191 982 aa7.03□□□□□ -1.28
TRAPPC13-208ENST00000505553 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-208ENST00000505553 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
TRAPPC13-208ENST00000505553 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
TRAPPC13-208ENST00000505553 BCRP11274 1271 aa7.02□□□□□ -1.29
TRAPPC13-208ENST00000505553 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-208ENST00000505553 MBIPQ9NS73 344 aa7.02□□□□□ -1.29
TRAPPC13-208ENST00000505553 CTSOP43234 321 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 DHX9Q08211 1270 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 GAS6Q14393 721 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 FOXR1Q6PIV2 292 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 MAGEB6P1A0A0J9YX57 407 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 RSBN1LQ6PCB5 846 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 ALYREFQ86V81 257 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 GMCL1Q96IK5 515 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 ARID3AQ99856 593 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 ZBTB3Q9H5J0 574 aa7.01□□□□□ -1.29
TRAPPC13-208ENST00000505553 RNF217Q8TC41 542 aa7□□□□□ -1.29
TRAPPC13-208ENST00000505553 INSM2Q96T92 566 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-208ENST00000505553 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
TRAPPC13-208ENST00000505553 SENP3-EIF4A1A0A087X0R7 540 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 APBB1O00213 710 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 RANGAP1P46060 587 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 RELBQ01201 579 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 SH3BP5LQ7L8J4 393 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 RIC3Q7Z5B4 369 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 PCMTD1Q96MG8 357 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 CDV3Q9UKY7 258 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 IGF1RP08069 1367 aa6.99□□□□□ -1.29
TRAPPC13-208ENST00000505553 FURINP09958 794 aa6.98□□□□□ -1.29
TRAPPC13-208ENST00000505553 A6NJR5 290 aa6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 HRCP23327 699 aa6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 PRPF38BQ5VTL8 546 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 C1orf115Q9H7X2 142 aa6.97□□□□□ -1.29
TRAPPC13-208ENST00000505553 TRIM26Q12899 539 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms