RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TRPC5Q9UL62 973 aaPredicted RBP22.58■■□□□ 1.21
SCLT1-205ENST00000503401 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
SCLT1-205ENST00000503401 CC2D1BQ5T0F9 858 aaKnown RBP22.57■■□□□ 1.2
SCLT1-205ENST00000503401 MAP2P11137 1827 aaKnown RBP22.56■■□□□ 1.2
SCLT1-205ENST00000503401 NSD2O96028 1365 aa22.56■■□□□ 1.2
SCLT1-205ENST00000503401 DDX10Q13206 875 aaKnown RBP22.56■■□□□ 1.2
SCLT1-205ENST00000503401 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
SCLT1-205ENST00000503401 EVA1CP58658 441 aa22.55■■□□□ 1.2
SCLT1-205ENST00000503401 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
SCLT1-205ENST00000503401 VPS72Q15906 364 aa22.53■■□□□ 1.2
SCLT1-205ENST00000503401 MORC1Q86VD1 984 aa22.53■■□□□ 1.2
SCLT1-205ENST00000503401 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
SCLT1-205ENST00000503401 RXRBP28702 533 aa22.53■■□□□ 1.2
SCLT1-205ENST00000503401 LARP1Q6PKG0 1096 aaKnown RBP22.53■■□□□ 1.2
SCLT1-205ENST00000503401 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
SCLT1-205ENST00000503401 GJD4Q96KN9 370 aaPredicted RBP22.53■■□□□ 1.2
SCLT1-205ENST00000503401 PEAK1Q9H792 1746 aa22.52■■□□□ 1.2
SCLT1-205ENST00000503401 AMPHP49418 695 aa22.52■■□□□ 1.2
SCLT1-205ENST00000503401 EMILIN1Q9Y6C2 1016 aa22.52■■□□□ 1.2
SCLT1-205ENST00000503401 GLI3P10071 1580 aa22.52■■□□□ 1.2
SCLT1-205ENST00000503401 RBM6P78332 1123 aaKnown RBP22.51■■□□□ 1.19
SCLT1-205ENST00000503401 ABCC6O95255 1503 aa22.51■■□□□ 1.19
SCLT1-205ENST00000503401 HOXC9P31274 260 aa22.5■■□□□ 1.19
SCLT1-205ENST00000503401 IP6K1Q92551 441 aa22.5■■□□□ 1.19
SCLT1-205ENST00000503401 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
SCLT1-205ENST00000503401 USP35Q9P2H5 1018 aa22.49■■□□□ 1.19
SCLT1-205ENST00000503401 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
SCLT1-205ENST00000503401 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
SCLT1-205ENST00000503401 LTV1Q96GA3 475 aaPredicted RBP22.48■■□□□ 1.19
SCLT1-205ENST00000503401 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
SCLT1-205ENST00000503401 CSB-PGBD3P0DP91 1061 aa22.47■■□□□ 1.19
SCLT1-205ENST00000503401 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
SCLT1-205ENST00000503401 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
SCLT1-205ENST00000503401 BLMP54132 1417 aaPredicted RBP22.46■■□□□ 1.19
SCLT1-205ENST00000503401 HSP90AB2PQ58FF8 381 aa22.46■■□□□ 1.19
SCLT1-205ENST00000503401 TOM1L2Q6ZVM7 507 aa22.46■■□□□ 1.19
SCLT1-205ENST00000503401 ANKRD24Q8TF21 1146 aa22.46■■□□□ 1.19
SCLT1-205ENST00000503401 ERBB3P21860 1342 aa22.45■■□□□ 1.19
SCLT1-205ENST00000503401 SPATA31A1Q5TZJ5 1347 aa22.45■■□□□ 1.19
SCLT1-205ENST00000503401 RTL1A6NKG5 1358 aa22.45■■□□□ 1.18
SCLT1-205ENST00000503401 FLT4P35916 1363 aa22.45■■□□□ 1.18
SCLT1-205ENST00000503401 CRB1P82279 1406 aa22.44■■□□□ 1.18
SCLT1-205ENST00000503401 FAM98CQ17RN3 349 aaKnown RBP22.44■■□□□ 1.18
SCLT1-205ENST00000503401 RGPD2P0DJD1 1756 aa22.44■■□□□ 1.18
SCLT1-205ENST00000503401 RGS12O14924 1447 aa22.44■■□□□ 1.18
SCLT1-205ENST00000503401 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
SCLT1-205ENST00000503401 EP400Q96L91 3159 aa22.41■■□□□ 1.18
SCLT1-205ENST00000503401 NLRP2Q9NX02 1062 aa22.41■■□□□ 1.18
SCLT1-205ENST00000503401 INSRP06213 1382 aa22.4■■□□□ 1.18
SCLT1-205ENST00000503401 A0A0G2JS52 829 aa22.4■■□□□ 1.18
SCLT1-205ENST00000503401 MYT1Q01538 1121 aa22.4■■□□□ 1.18
SCLT1-205ENST00000503401 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
SCLT1-205ENST00000503401 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
SCLT1-205ENST00000503401 SMG6Q86US8 1419 aaKnown RBP22.39■■□□□ 1.17
SCLT1-205ENST00000503401 BRWD3Q6RI45 1802 aa22.39■■□□□ 1.17
SCLT1-205ENST00000503401 FAM208AQ9UK61 1670 aaKnown RBP22.38■■□□□ 1.17
SCLT1-205ENST00000503401 SEPT12Q8IYM1 358 aa22.38■■□□□ 1.17
SCLT1-205ENST00000503401 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
SCLT1-205ENST00000503401 MTHFSP49914 203 aa22.37■■□□□ 1.17
SCLT1-205ENST00000503401 ONECUT3O60422 494 aaPredicted RBP22.36■■□□□ 1.17
SCLT1-205ENST00000503401 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
SCLT1-205ENST00000503401 THSD7AQ9UPZ6 1657 aa22.35■■□□□ 1.17
SCLT1-205ENST00000503401 NBPF6Q5VWK0 638 aa22.35■■□□□ 1.17
SCLT1-205ENST00000503401 BARGINQ6ZT62 677 aa22.35■■□□□ 1.17
SCLT1-205ENST00000503401 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
SCLT1-205ENST00000503401 NBPF4Q96M43 638 aa22.35■■□□□ 1.17
SCLT1-205ENST00000503401 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
SCLT1-205ENST00000503401 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.17
SCLT1-205ENST00000503401 PARD3Q8TEW0 1356 aa22.32■■□□□ 1.16
SCLT1-205ENST00000503401 PPP2R1AP30153 589 aa22.31■■□□□ 1.16
SCLT1-205ENST00000503401 PARP4Q9UKK3 1724 aaKnown RBP22.29■■□□□ 1.16
SCLT1-205ENST00000503401 EYA1Q99502 592 aa22.28■■□□□ 1.16
SCLT1-205ENST00000503401 DISP2A7MBM2 1401 aa22.28■■□□□ 1.16
SCLT1-205ENST00000503401 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
SCLT1-205ENST00000503401 FAM182BQ5T319 152 aa22.27■■□□□ 1.16
SCLT1-205ENST00000503401 IL2RBP14784 551 aa22.26■■□□□ 1.15
SCLT1-205ENST00000503401 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
SCLT1-205ENST00000503401 IL13P35225 146 aa22.25■■□□□ 1.15
SCLT1-205ENST00000503401 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
SCLT1-205ENST00000503401 MEGF6O75095 1541 aa22.24■■□□□ 1.15
SCLT1-205ENST00000503401 RALBP1Q15311 655 aa22.24■■□□□ 1.15
SCLT1-205ENST00000503401 DDB1Q16531 1140 aa22.24■■□□□ 1.15
SCLT1-205ENST00000503401 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
SCLT1-205ENST00000503401 RGPD1P0DJD0 1748 aa22.22■■□□□ 1.15
SCLT1-205ENST00000503401 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
SCLT1-205ENST00000503401 PDE3BQ13370 1112 aa22.22■■□□□ 1.15
SCLT1-205ENST00000503401 PRKRIP1Q9H875 184 aaPredicted RBP22.22■■□□□ 1.15
SCLT1-205ENST00000503401 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
SCLT1-205ENST00000503401 IGSF1Q8N6C5 1336 aa22.21■■□□□ 1.15
SCLT1-205ENST00000503401 AEBP1Q8IUX7 1158 aa22.2■■□□□ 1.15
SCLT1-205ENST00000503401 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.15
SCLT1-205ENST00000503401 EXOC5O00471 708 aa22.2■■□□□ 1.14
SCLT1-205ENST00000503401 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
SCLT1-205ENST00000503401 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
SCLT1-205ENST00000503401 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
SCLT1-205ENST00000503401 OVOS2A0A0G2JMS6 1433 aa22.18■■□□□ 1.14
SCLT1-205ENST00000503401 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
SCLT1-205ENST00000503401 TATP17735 454 aaPredicted RBP22.17■■□□□ 1.14
SCLT1-205ENST00000503401 SULT6B1Q6IMI4 303 aa22.17■■□□□ 1.14
SCLT1-205ENST00000503401 U2SURPO15042 1029 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms