RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 COL5A2P05997 1499 aaPredicted RBP27.18■■□□□ 1.94
HLA-B-255ENST00000498007 VPS72Q15906 364 aa27.17■■□□□ 1.94
HLA-B-255ENST00000498007 EVA1CP58658 441 aa27.16■■□□□ 1.94
HLA-B-255ENST00000498007 FBLN1P23142 703 aa27.15■■□□□ 1.94
HLA-B-255ENST00000498007 GJD4Q96KN9 370 aaPredicted RBP27.15■■□□□ 1.94
HLA-B-255ENST00000498007 RGS12O14924 1447 aa27.14■■□□□ 1.93
HLA-B-255ENST00000498007 NSD2O96028 1365 aa27.13■■□□□ 1.93
HLA-B-255ENST00000498007 AXIN2Q9Y2T1 843 aa27.13■■□□□ 1.93
HLA-B-255ENST00000498007 RRS1Q15050 365 aaKnown RBP27.12■■□□□ 1.93
HLA-B-255ENST00000498007 MAP3K19Q56UN5 1328 aa27.12■■□□□ 1.93
HLA-B-255ENST00000498007 CDK12Q9NYV4 1490 aaPredicted RBP27.12■■□□□ 1.93
HLA-B-255ENST00000498007 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
HLA-B-255ENST00000498007 TNNT2P45379 298 aaPredicted RBP27.09■■□□□ 1.93
HLA-B-255ENST00000498007 SPATA31A5Q5VU36 1347 aa27.09■■□□□ 1.93
HLA-B-255ENST00000498007 SPATA31A7Q8IWB4 1347 aa27.09■■□□□ 1.93
HLA-B-255ENST00000498007 PEAK1Q9H792 1746 aa27.08■■□□□ 1.93
HLA-B-255ENST00000498007 AMPHP49418 695 aa27.08■■□□□ 1.93
HLA-B-255ENST00000498007 USP35Q9P2H5 1018 aa27.08■■□□□ 1.93
HLA-B-255ENST00000498007 CSB-PGBD3P0DP91 1061 aa27.07■■□□□ 1.92
HLA-B-255ENST00000498007 AMER1Q5JTC6 1135 aaPredicted RBP27.07■■□□□ 1.92
HLA-B-255ENST00000498007 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
HLA-B-255ENST00000498007 CRB1P82279 1406 aa27.07■■□□□ 1.92
HLA-B-255ENST00000498007 PER1O15534 1290 aaPredicted RBP27.06■■□□□ 1.92
HLA-B-255ENST00000498007 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
HLA-B-255ENST00000498007 MAP2P11137 1827 aaKnown RBP27.06■■□□□ 1.92
HLA-B-255ENST00000498007 RTL1A6NKG5 1358 aa27.06■■□□□ 1.92
HLA-B-255ENST00000498007 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
HLA-B-255ENST00000498007 MORC1Q86VD1 984 aa27.05■■□□□ 1.92
HLA-B-255ENST00000498007 WDR17Q8IZU2 1322 aa27.05■■□□□ 1.92
HLA-B-255ENST00000498007 A0A0G2JS52 829 aa27.04■■□□□ 1.92
HLA-B-255ENST00000498007 HOXC9P31274 260 aa27.04■■□□□ 1.92
HLA-B-255ENST00000498007 MYT1Q01538 1121 aa27.04■■□□□ 1.92
HLA-B-255ENST00000498007 FAM98CQ17RN3 349 aaKnown RBP27.04■■□□□ 1.92
HLA-B-255ENST00000498007 CC2D1BQ5T0F9 858 aaKnown RBP27.04■■□□□ 1.92
HLA-B-255ENST00000498007 TOM1L2Q6ZVM7 507 aa27.04■■□□□ 1.92
HLA-B-255ENST00000498007 IP6K1Q92551 441 aa27.04■■□□□ 1.92
HLA-B-255ENST00000498007 ERBB3P21860 1342 aa27.03■■□□□ 1.92
HLA-B-255ENST00000498007 EMILIN1Q9Y6C2 1016 aa27.03■■□□□ 1.92
HLA-B-255ENST00000498007 FAM208AQ9UK61 1670 aaKnown RBP27.02■■□□□ 1.92
HLA-B-255ENST00000498007 ANKRD24Q8TF21 1146 aa27.02■■□□□ 1.92
HLA-B-255ENST00000498007 FLT4P35916 1363 aa27.01■■□□□ 1.91
HLA-B-255ENST00000498007 PPM1GO15355 546 aaPredicted RBP27.01■■□□□ 1.91
HLA-B-255ENST00000498007 LTV1Q96GA3 475 aaPredicted RBP27.01■■□□□ 1.91
HLA-B-255ENST00000498007 WNK3Q9BYP7 1800 aa27.01■■□□□ 1.91
HLA-B-255ENST00000498007 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.91
HLA-B-255ENST00000498007 BRWD3Q6RI45 1802 aa27■■□□□ 1.91
HLA-B-255ENST00000498007 KIF24Q5T7B8 1368 aa26.98■■□□□ 1.91
HLA-B-255ENST00000498007 SEPT12Q8IYM1 358 aa26.98■■□□□ 1.91
HLA-B-255ENST00000498007 TCP11L2Q8N4U5 519 aa26.98■■□□□ 1.91
HLA-B-255ENST00000498007 SMG6Q86US8 1419 aaKnown RBP26.97■■□□□ 1.91
HLA-B-255ENST00000498007 RGPD2P0DJD1 1756 aa26.97■■□□□ 1.91
HLA-B-255ENST00000498007 NPC1L1Q9UHC9 1359 aa26.97■■□□□ 1.91
HLA-B-255ENST00000498007 NLRP2Q9NX02 1062 aa26.96■■□□□ 1.91
HLA-B-255ENST00000498007 POLKQ9UBT6 870 aa26.96■■□□□ 1.91
HLA-B-255ENST00000498007 HSP90AB2PQ58FF8 381 aa26.95■■□□□ 1.9
HLA-B-255ENST00000498007 INSRP06213 1382 aa26.95■■□□□ 1.9
HLA-B-255ENST00000498007 ONECUT3O60422 494 aaPredicted RBP26.94■■□□□ 1.9
HLA-B-255ENST00000498007 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
HLA-B-255ENST00000498007 CARD10Q9BWT7 1032 aa26.94■■□□□ 1.9
HLA-B-255ENST00000498007 THRAP3Q9Y2W1 955 aaKnown RBP26.94■■□□□ 1.9
HLA-B-255ENST00000498007 BARGINQ6ZT62 677 aa26.93■■□□□ 1.9
HLA-B-255ENST00000498007 PARP4Q9UKK3 1724 aaKnown RBP26.92■■□□□ 1.9
HLA-B-255ENST00000498007 LRRC37A3O60309 1634 aa26.91■■□□□ 1.9
HLA-B-255ENST00000498007 ZNF316A6NFI3 1004 aaPredicted RBP26.88■■□□□ 1.89
HLA-B-255ENST00000498007 DISP2A7MBM2 1401 aa26.86■■□□□ 1.89
HLA-B-255ENST00000498007 SOCS7O14512 581 aa26.86■■□□□ 1.89
HLA-B-255ENST00000498007 KRT27Q7Z3Y8 459 aa26.86■■□□□ 1.89
HLA-B-255ENST00000498007 USHBP1Q8N6Y0 703 aa26.84■■□□□ 1.89
HLA-B-255ENST00000498007 EP400Q96L91 3159 aa26.83■■□□□ 1.89
HLA-B-255ENST00000498007 NBPF6Q5VWK0 638 aa26.83■■□□□ 1.89
HLA-B-255ENST00000498007 NBPF4Q96M43 638 aa26.83■■□□□ 1.89
HLA-B-255ENST00000498007 CDCA7Q9BWT1 371 aaPredicted RBP26.82■■□□□ 1.88
HLA-B-255ENST00000498007 MTHFSP49914 203 aa26.81■■□□□ 1.88
HLA-B-255ENST00000498007 EIF4A2Q14240 407 aaKnown RBP26.81■■□□□ 1.88
HLA-B-255ENST00000498007 IL2RBP14784 551 aa26.8■■□□□ 1.88
HLA-B-255ENST00000498007 PDE3BQ13370 1112 aa26.8■■□□□ 1.88
HLA-B-255ENST00000498007 DDB1Q16531 1140 aa26.8■■□□□ 1.88
HLA-B-255ENST00000498007 FAM182BQ5T319 152 aa26.79■■□□□ 1.88
HLA-B-255ENST00000498007 TNS2Q63HR2 1409 aa26.79■■□□□ 1.88
HLA-B-255ENST00000498007 MEGF6O75095 1541 aa26.78■■□□□ 1.88
HLA-B-255ENST00000498007 PARD3Q8TEW0 1356 aa26.76■■□□□ 1.87
HLA-B-255ENST00000498007 EYA1Q99502 592 aa26.75■■□□□ 1.87
HLA-B-255ENST00000498007 NCAPD2Q15021 1401 aa26.73■■□□□ 1.87
HLA-B-255ENST00000498007 EXOC5O00471 708 aa26.73■■□□□ 1.87
HLA-B-255ENST00000498007 PPP2R1AP30153 589 aa26.73■■□□□ 1.87
HLA-B-255ENST00000498007 RAPGEF4Q8WZA2 1011 aa26.73■■□□□ 1.87
HLA-B-255ENST00000498007 RGPD1P0DJD0 1748 aa26.73■■□□□ 1.87
HLA-B-255ENST00000498007 COL3A1P02461 1466 aaPredicted RBP26.72■■□□□ 1.87
HLA-B-255ENST00000498007 OVOS2A0A0G2JMS6 1433 aa26.72■■□□□ 1.87
HLA-B-255ENST00000498007 SHANK3Q9BYB0 1731 aa26.71■■□□□ 1.87
HLA-B-255ENST00000498007 UPF1Q92900 1129 aaKnown RBP eCLIP26.71■■□□□ 1.87
HLA-B-255ENST00000498007 IGSF1Q8N6C5 1336 aa26.7■■□□□ 1.87
HLA-B-255ENST00000498007 TATP17735 454 aaPredicted RBP26.69■■□□□ 1.86
HLA-B-255ENST00000498007 IL13P35225 146 aa26.69■■□□□ 1.86
HLA-B-255ENST00000498007 MARCH10Q8NA82 808 aaPredicted RBP26.68■■□□□ 1.86
HLA-B-255ENST00000498007 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
HLA-B-255ENST00000498007 CFAP53Q96M91 514 aa26.67■■□□□ 1.86
HLA-B-255ENST00000498007 PKD1L3Q7Z443 1732 aa26.67■■□□□ 1.86
HLA-B-255ENST00000498007 FAM196AQ6ZSG2 479 aa26.66■■□□□ 1.86
HLA-B-255ENST00000498007 RALBP1Q15311 655 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms