RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 ABCC6O95255 1503 aa21.45■■□□□ 1.02
PMF1-205ENST00000497069 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
PMF1-205ENST00000497069 LTN1O94822 1766 aa21.45■■□□□ 1.02
PMF1-205ENST00000497069 NWD2Q9ULI1 1742 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 HOXC9P31274 260 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 FLT4P35916 1363 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 BLMP54132 1417 aaPredicted RBP21.44■■□□□ 1.02
PMF1-205ENST00000497069 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 CAMTA1Q9Y6Y1 1673 aa21.44■■□□□ 1.02
PMF1-205ENST00000497069 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
PMF1-205ENST00000497069 TRPC5Q9UL62 973 aaPredicted RBP21.43■■□□□ 1.02
PMF1-205ENST00000497069 CCDC9Q9Y3X0 531 aaKnown RBP21.43■■□□□ 1.02
PMF1-205ENST00000497069 RALBP1Q15311 655 aa21.42■■□□□ 1.02
PMF1-205ENST00000497069 QTRT2Q9H974 415 aaKnown RBP21.42■■□□□ 1.02
PMF1-205ENST00000497069 COL18A1P39060 1754 aa21.41■■□□□ 1.02
PMF1-205ENST00000497069 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
PMF1-205ENST00000497069 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
PMF1-205ENST00000497069 VPS72Q15906 364 aa21.4■■□□□ 1.02
PMF1-205ENST00000497069 ANKRD24Q8TF21 1146 aa21.4■■□□□ 1.02
PMF1-205ENST00000497069 SMG6Q86US8 1419 aaKnown RBP21.39■■□□□ 1.02
PMF1-205ENST00000497069 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
PMF1-205ENST00000497069 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.01
PMF1-205ENST00000497069 RGS17Q9UGC6 210 aaPredicted RBP21.39■■□□□ 1.01
PMF1-205ENST00000497069 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
PMF1-205ENST00000497069 INSRP06213 1382 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 WDR17Q8IZU2 1322 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 MTHFSP49914 203 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
PMF1-205ENST00000497069 TOM1L2Q6ZVM7 507 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 NRAPQ86VF7 1730 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 ATRNO75882 1429 aa21.38■■□□□ 1.01
PMF1-205ENST00000497069 ERBB3P21860 1342 aa21.37■■□□□ 1.01
PMF1-205ENST00000497069 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
PMF1-205ENST00000497069 PEAK1Q9H792 1746 aa21.36■■□□□ 1.01
PMF1-205ENST00000497069 ANP32CO43423 234 aa21.36■■□□□ 1.01
PMF1-205ENST00000497069 CDK12Q9NYV4 1490 aaPredicted RBP21.35■■□□□ 1.01
PMF1-205ENST00000497069 GJD4Q96KN9 370 aaPredicted RBP21.35■■□□□ 1.01
PMF1-205ENST00000497069 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
PMF1-205ENST00000497069 PRKRIP1Q9H875 184 aaPredicted RBP21.35■■□□□ 1.01
PMF1-205ENST00000497069 NLRP2Q9NX02 1062 aa21.35■■□□□ 1.01
PMF1-205ENST00000497069 CRB1P82279 1406 aa21.35■■□□□ 1.01
PMF1-205ENST00000497069 RXRBP28702 533 aa21.34■■□□□ 1.01
PMF1-205ENST00000497069 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
PMF1-205ENST00000497069 USP35Q9P2H5 1018 aa21.34■■□□□ 1.01
PMF1-205ENST00000497069 SPATA31A5Q5VU36 1347 aa21.33■■□□□ 1.01
PMF1-205ENST00000497069 SPATA31A7Q8IWB4 1347 aa21.33■■□□□ 1.01
PMF1-205ENST00000497069 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1.01
PMF1-205ENST00000497069 RGPD5Q99666 1765 aa21.33■■□□□ 1
PMF1-205ENST00000497069 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
PMF1-205ENST00000497069 CARD10Q9BWT7 1032 aa21.32■■□□□ 1
PMF1-205ENST00000497069 SPATA31A1Q5TZJ5 1347 aa21.31■■□□□ 1
PMF1-205ENST00000497069 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
PMF1-205ENST00000497069 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
PMF1-205ENST00000497069 THRAP3Q9Y2W1 955 aaKnown RBP21.29■■□□□ 1
PMF1-205ENST00000497069 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
PMF1-205ENST00000497069 A0A0G2JS52 829 aa21.28■■□□□ 1
PMF1-205ENST00000497069 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
PMF1-205ENST00000497069 MYT1Q01538 1121 aa21.28■■□□□ 1
PMF1-205ENST00000497069 FAM98CQ17RN3 349 aaKnown RBP21.27■■□□□ 1
PMF1-205ENST00000497069 NBPF6Q5VWK0 638 aa21.26■□□□□ 0.99
PMF1-205ENST00000497069 NBPF4Q96M43 638 aa21.26■□□□□ 0.99
PMF1-205ENST00000497069 GLI3P10071 1580 aa21.26■□□□□ 0.99
PMF1-205ENST00000497069 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
PMF1-205ENST00000497069 BARGINQ6ZT62 677 aa21.25■□□□□ 0.99
PMF1-205ENST00000497069 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
PMF1-205ENST00000497069 IL13P35225 146 aa21.24■□□□□ 0.99
PMF1-205ENST00000497069 USHBP1Q8N6Y0 703 aa21.24■□□□□ 0.99
PMF1-205ENST00000497069 EYA1Q99502 592 aa21.24■□□□□ 0.99
PMF1-205ENST00000497069 CDCA7Q9BWT1 371 aaPredicted RBP21.23■□□□□ 0.99
PMF1-205ENST00000497069 COL3A1P02461 1466 aaPredicted RBP21.22■□□□□ 0.99
PMF1-205ENST00000497069 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
PMF1-205ENST00000497069 ONECUT3O60422 494 aaPredicted RBP21.21■□□□□ 0.99
PMF1-205ENST00000497069 IL2RBP14784 551 aa21.21■□□□□ 0.99
PMF1-205ENST00000497069 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
PMF1-205ENST00000497069 RAPGEF4Q8WZA2 1011 aa21.21■□□□□ 0.99
PMF1-205ENST00000497069 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
PMF1-205ENST00000497069 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
PMF1-205ENST00000497069 RGS12O14924 1447 aa21.18■□□□□ 0.98
PMF1-205ENST00000497069 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
PMF1-205ENST00000497069 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
PMF1-205ENST00000497069 DISP2A7MBM2 1401 aa21.16■□□□□ 0.98
PMF1-205ENST00000497069 U2AF1L5P0DN76 240 aaPredicted RBP21.16■□□□□ 0.98
PMF1-205ENST00000497069 U2AF1Q01081 240 aaKnown RBP eCLIP21.16■□□□□ 0.98
PMF1-205ENST00000497069 DDB1Q16531 1140 aa21.16■□□□□ 0.98
PMF1-205ENST00000497069 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
PMF1-205ENST00000497069 EXOC5O00471 708 aa21.15■□□□□ 0.98
PMF1-205ENST00000497069 HMOX1P09601 288 aa21.15■□□□□ 0.98
PMF1-205ENST00000497069 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
PMF1-205ENST00000497069 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
PMF1-205ENST00000497069 WDR43Q15061 677 aaKnown RBP eCLIP21.13■□□□□ 0.97
PMF1-205ENST00000497069 AEBP1Q8IUX7 1158 aa21.13■□□□□ 0.97
PMF1-205ENST00000497069 MEGF6O75095 1541 aa21.13■□□□□ 0.97
PMF1-205ENST00000497069 RGPD1P0DJD0 1748 aa21.12■□□□□ 0.97
PMF1-205ENST00000497069 KDRP35968 1356 aa21.12■□□□□ 0.97
PMF1-205ENST00000497069 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
PMF1-205ENST00000497069 WNK3Q9BYP7 1800 aa21.12■□□□□ 0.97
PMF1-205ENST00000497069 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms