RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 FBLN1P23142 703 aa18.71■□□□□ 0.59
FDPS-219ENST00000495308 VPS72Q15906 364 aa18.71■□□□□ 0.59
FDPS-219ENST00000495308 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
FDPS-219ENST00000495308 CGNL1Q0VF96 1302 aa18.71■□□□□ 0.59
FDPS-219ENST00000495308 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
FDPS-219ENST00000495308 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
FDPS-219ENST00000495308 AXIN2Q9Y2T1 843 aa18.7■□□□□ 0.58
FDPS-219ENST00000495308 CDK12Q9NYV4 1490 aaPredicted RBP18.7■□□□□ 0.58
FDPS-219ENST00000495308 EP400Q96L91 3159 aa18.69■□□□□ 0.58
FDPS-219ENST00000495308 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
FDPS-219ENST00000495308 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
FDPS-219ENST00000495308 EVA1CP58658 441 aa18.67■□□□□ 0.58
FDPS-219ENST00000495308 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
FDPS-219ENST00000495308 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
FDPS-219ENST00000495308 SPATA31A5Q5VU36 1347 aa18.66■□□□□ 0.58
FDPS-219ENST00000495308 SPATA31A7Q8IWB4 1347 aa18.66■□□□□ 0.58
FDPS-219ENST00000495308 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
FDPS-219ENST00000495308 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
FDPS-219ENST00000495308 KNSTRNQ9Y448 316 aa18.65■□□□□ 0.58
FDPS-219ENST00000495308 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
FDPS-219ENST00000495308 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
FDPS-219ENST00000495308 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
FDPS-219ENST00000495308 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
FDPS-219ENST00000495308 NSD2O96028 1365 aa18.63■□□□□ 0.57
FDPS-219ENST00000495308 CRB1P82279 1406 aa18.63■□□□□ 0.57
FDPS-219ENST00000495308 PER1O15534 1290 aaPredicted RBP18.62■□□□□ 0.57
FDPS-219ENST00000495308 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
FDPS-219ENST00000495308 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
FDPS-219ENST00000495308 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
FDPS-219ENST00000495308 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
FDPS-219ENST00000495308 HOXC9P31274 260 aa18.61■□□□□ 0.57
FDPS-219ENST00000495308 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
FDPS-219ENST00000495308 IP6K1Q92551 441 aa18.61■□□□□ 0.57
FDPS-219ENST00000495308 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 A0A0G2JS52 829 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 AMPHP49418 695 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 MYT1Q01538 1121 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
FDPS-219ENST00000495308 ERBB3P21860 1342 aa18.59■□□□□ 0.57
FDPS-219ENST00000495308 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
FDPS-219ENST00000495308 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
FDPS-219ENST00000495308 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
FDPS-219ENST00000495308 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
FDPS-219ENST00000495308 PARP4Q9UKK3 1724 aaKnown RBP18.59■□□□□ 0.57
FDPS-219ENST00000495308 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
FDPS-219ENST00000495308 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
FDPS-219ENST00000495308 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
FDPS-219ENST00000495308 FLT4P35916 1363 aa18.57■□□□□ 0.56
FDPS-219ENST00000495308 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
FDPS-219ENST00000495308 LRRC37A3O60309 1634 aa18.56■□□□□ 0.56
FDPS-219ENST00000495308 TCP11L2Q8N4U5 519 aa18.56■□□□□ 0.56
FDPS-219ENST00000495308 SOCS7O14512 581 aa18.55■□□□□ 0.56
FDPS-219ENST00000495308 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
FDPS-219ENST00000495308 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 THRAP3Q9Y2W1 955 aaKnown RBP18.54■□□□□ 0.56
FDPS-219ENST00000495308 INSRP06213 1382 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
FDPS-219ENST00000495308 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
FDPS-219ENST00000495308 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
FDPS-219ENST00000495308 DISP2A7MBM2 1401 aa18.5■□□□□ 0.55
FDPS-219ENST00000495308 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
FDPS-219ENST00000495308 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
FDPS-219ENST00000495308 FAM182BQ5T319 152 aa18.48■□□□□ 0.55
FDPS-219ENST00000495308 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
FDPS-219ENST00000495308 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
FDPS-219ENST00000495308 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
FDPS-219ENST00000495308 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
FDPS-219ENST00000495308 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
FDPS-219ENST00000495308 MEGF6O75095 1541 aa18.44■□□□□ 0.54
FDPS-219ENST00000495308 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
FDPS-219ENST00000495308 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
FDPS-219ENST00000495308 DDB1Q16531 1140 aa18.44■□□□□ 0.54
FDPS-219ENST00000495308 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
FDPS-219ENST00000495308 CDCA7Q9BWT1 371 aaPredicted RBP18.44■□□□□ 0.54
FDPS-219ENST00000495308 RGPD1P0DJD0 1748 aa18.43■□□□□ 0.54
FDPS-219ENST00000495308 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
FDPS-219ENST00000495308 IL2RBP14784 551 aa18.43■□□□□ 0.54
FDPS-219ENST00000495308 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
FDPS-219ENST00000495308 MTHFSP49914 203 aa18.42■□□□□ 0.54
FDPS-219ENST00000495308 TNS1Q9HBL0 1735 aaKnown RBP18.42■□□□□ 0.54
FDPS-219ENST00000495308 NCAPD2Q15021 1401 aa18.41■□□□□ 0.54
FDPS-219ENST00000495308 EYA1Q99502 592 aa18.4■□□□□ 0.54
FDPS-219ENST00000495308 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
FDPS-219ENST00000495308 EXOC5O00471 708 aa18.39■□□□□ 0.53
FDPS-219ENST00000495308 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
FDPS-219ENST00000495308 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.53
FDPS-219ENST00000495308 MARCH10Q8NA82 808 aaPredicted RBP18.38■□□□□ 0.53
FDPS-219ENST00000495308 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
FDPS-219ENST00000495308 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
FDPS-219ENST00000495308 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
FDPS-219ENST00000495308 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
FDPS-219ENST00000495308 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
FDPS-219ENST00000495308 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
FDPS-219ENST00000495308 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
FDPS-219ENST00000495308 IL13P35225 146 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms