RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-215ENST00000494058 NWD2Q9ULI1 1742 aa17.75■□□□□ 0.43
SKIV2L-215ENST00000494058 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
SKIV2L-215ENST00000494058 SLIT2O94813 1529 aa17.74■□□□□ 0.43
SKIV2L-215ENST00000494058 ANP32CO43423 234 aa17.74■□□□□ 0.43
SKIV2L-215ENST00000494058 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
SKIV2L-215ENST00000494058 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
SKIV2L-215ENST00000494058 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
SKIV2L-215ENST00000494058 HOXC9P31274 260 aa17.73■□□□□ 0.43
SKIV2L-215ENST00000494058 INSRP06213 1382 aa17.72■□□□□ 0.43
SKIV2L-215ENST00000494058 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
SKIV2L-215ENST00000494058 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
SKIV2L-215ENST00000494058 LTN1O94822 1766 aa17.71■□□□□ 0.43
SKIV2L-215ENST00000494058 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
SKIV2L-215ENST00000494058 VPS72Q15906 364 aa17.71■□□□□ 0.43
SKIV2L-215ENST00000494058 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
SKIV2L-215ENST00000494058 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
SKIV2L-215ENST00000494058 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.42
SKIV2L-215ENST00000494058 FBLN1P23142 703 aa17.7■□□□□ 0.42
SKIV2L-215ENST00000494058 MTHFSP49914 203 aa17.7■□□□□ 0.42
SKIV2L-215ENST00000494058 ANKRD24Q8TF21 1146 aa17.7■□□□□ 0.42
SKIV2L-215ENST00000494058 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
SKIV2L-215ENST00000494058 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
SKIV2L-215ENST00000494058 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 THRAP3Q9Y2W1 955 aaKnown RBP17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 ERBB3P21860 1342 aa17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
SKIV2L-215ENST00000494058 CRB1P82279 1406 aa17.67■□□□□ 0.42
SKIV2L-215ENST00000494058 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
SKIV2L-215ENST00000494058 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
SKIV2L-215ENST00000494058 COL18A1P39060 1754 aa17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 RXRBP28702 533 aa17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 RBM6P78332 1123 aaKnown RBP17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
SKIV2L-215ENST00000494058 ATRNO75882 1429 aa17.65■□□□□ 0.42
SKIV2L-215ENST00000494058 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
SKIV2L-215ENST00000494058 CDCA7Q9BWT1 371 aaPredicted RBP17.65■□□□□ 0.42
SKIV2L-215ENST00000494058 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
SKIV2L-215ENST00000494058 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
SKIV2L-215ENST00000494058 LARP1Q6PKG0 1096 aaKnown RBP17.64■□□□□ 0.41
SKIV2L-215ENST00000494058 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
SKIV2L-215ENST00000494058 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
SKIV2L-215ENST00000494058 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
SKIV2L-215ENST00000494058 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
SKIV2L-215ENST00000494058 FAM208AQ9UK61 1670 aaKnown RBP17.63■□□□□ 0.41
SKIV2L-215ENST00000494058 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
SKIV2L-215ENST00000494058 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
SKIV2L-215ENST00000494058 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
SKIV2L-215ENST00000494058 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
SKIV2L-215ENST00000494058 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
SKIV2L-215ENST00000494058 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
SKIV2L-215ENST00000494058 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
SKIV2L-215ENST00000494058 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
SKIV2L-215ENST00000494058 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
SKIV2L-215ENST00000494058 A0A0G2JS52 829 aa17.58■□□□□ 0.4
SKIV2L-215ENST00000494058 MYT1Q01538 1121 aa17.58■□□□□ 0.4
SKIV2L-215ENST00000494058 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
SKIV2L-215ENST00000494058 RAPGEF4Q8WZA2 1011 aa17.58■□□□□ 0.4
SKIV2L-215ENST00000494058 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
SKIV2L-215ENST00000494058 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
SKIV2L-215ENST00000494058 IL2RBP14784 551 aa17.57■□□□□ 0.4
SKIV2L-215ENST00000494058 IL13P35225 146 aa17.57■□□□□ 0.4
SKIV2L-215ENST00000494058 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
SKIV2L-215ENST00000494058 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
SKIV2L-215ENST00000494058 U2SURPO15042 1029 aaKnown RBP17.56■□□□□ 0.4
SKIV2L-215ENST00000494058 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
SKIV2L-215ENST00000494058 EYA1Q99502 592 aa17.56■□□□□ 0.4
SKIV2L-215ENST00000494058 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
SKIV2L-215ENST00000494058 NEFMP07197 916 aa17.55■□□□□ 0.4
SKIV2L-215ENST00000494058 TATP17735 454 aaPredicted RBP17.55■□□□□ 0.4
SKIV2L-215ENST00000494058 IGSF1Q8N6C5 1336 aa17.54■□□□□ 0.4
SKIV2L-215ENST00000494058 EXOC5O00471 708 aa17.53■□□□□ 0.4
SKIV2L-215ENST00000494058 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
SKIV2L-215ENST00000494058 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 DDB1Q16531 1140 aa17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
SKIV2L-215ENST00000494058 GLI3P10071 1580 aa17.52■□□□□ 0.39
SKIV2L-215ENST00000494058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.51■□□□□ 0.396e-7■■■□□ 17
SKIV2L-215ENST00000494058 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
SKIV2L-215ENST00000494058 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
SKIV2L-215ENST00000494058 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
SKIV2L-215ENST00000494058 FCHSD2O94868 740 aa17.5■□□□□ 0.39
SKIV2L-215ENST00000494058 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
SKIV2L-215ENST00000494058 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
SKIV2L-215ENST00000494058 SOCS7O14512 581 aa17.49■□□□□ 0.39
SKIV2L-215ENST00000494058 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
SKIV2L-215ENST00000494058 MRS2Q9HD23 443 aa17.49■□□□□ 0.39
SKIV2L-215ENST00000494058 KDRP35968 1356 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms