RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LMO7Q8WWI1 1683 aa25.06■■□□□ 1.6
MCF2L-230ENST00000491028 PPM1GO15355 546 aaPredicted RBP25.05■■□□□ 1.6
MCF2L-230ENST00000491028 HOXC9P31274 260 aa25.04■■□□□ 1.6
MCF2L-230ENST00000491028 IP6K1Q92551 441 aa25.04■■□□□ 1.6
MCF2L-230ENST00000491028 PRDM11Q9NQV5 511 aa25.03■■□□□ 1.6
MCF2L-230ENST00000491028 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
MCF2L-230ENST00000491028 MRS2Q9HD23 443 aa25.02■■□□□ 1.6
MCF2L-230ENST00000491028 RGPD5Q99666 1765 aa25.02■■□□□ 1.6
MCF2L-230ENST00000491028 PLCH1Q4KWH8 1693 aa25.01■■□□□ 1.59
MCF2L-230ENST00000491028 LRP6O75581 1613 aa25.01■■□□□ 1.59
MCF2L-230ENST00000491028 NUTM2BA6NNL0 878 aaPredicted RBP25■■□□□ 1.59
MCF2L-230ENST00000491028 NUTM2EB1AL46 878 aaPredicted RBP25■■□□□ 1.59
MCF2L-230ENST00000491028 NUTM2AQ8IVF1 878 aaPredicted RBP25■■□□□ 1.59
MCF2L-230ENST00000491028 FAM208AQ9UK61 1670 aaKnown RBP25■■□□□ 1.59
MCF2L-230ENST00000491028 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
MCF2L-230ENST00000491028 NWD2Q9ULI1 1742 aa24.98■■□□□ 1.59
MCF2L-230ENST00000491028 CHRNA2Q15822 529 aa24.98■■□□□ 1.59
MCF2L-230ENST00000491028 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
MCF2L-230ENST00000491028 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
MCF2L-230ENST00000491028 CAMTA1Q9Y6Y1 1673 aa24.97■■□□□ 1.59
MCF2L-230ENST00000491028 ADAMTS2O95450 1211 aa24.96■■□□□ 1.59
MCF2L-230ENST00000491028 FAM83GA6ND36 823 aa24.95■■□□□ 1.58
MCF2L-230ENST00000491028 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.58
MCF2L-230ENST00000491028 EIF4A2Q14240 407 aaKnown RBP24.94■■□□□ 1.58
MCF2L-230ENST00000491028 NUDCQ9Y266 331 aa24.94■■□□□ 1.58
MCF2L-230ENST00000491028 AXIN2Q9Y2T1 843 aa24.94■■□□□ 1.58
MCF2L-230ENST00000491028 COL5A2P05997 1499 aaPredicted RBP24.94■■□□□ 1.58
MCF2L-230ENST00000491028 ERBB3P21860 1342 aa24.93■■□□□ 1.58
MCF2L-230ENST00000491028 NRAPQ86VF7 1730 aa24.93■■□□□ 1.58
MCF2L-230ENST00000491028 IL13P35225 146 aa24.93■■□□□ 1.58
MCF2L-230ENST00000491028 SLIT2O94813 1529 aa24.91■■□□□ 1.58
MCF2L-230ENST00000491028 ANKRD24Q8TF21 1146 aa24.91■■□□□ 1.58
MCF2L-230ENST00000491028 WDR43Q15061 677 aaKnown RBP eCLIP24.9■■□□□ 1.58
MCF2L-230ENST00000491028 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
MCF2L-230ENST00000491028 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.58
MCF2L-230ENST00000491028 MEX3CQ5U5Q3 659 aaKnown RBP24.89■■□□□ 1.58
MCF2L-230ENST00000491028 RGPD2P0DJD1 1756 aa24.88■■□□□ 1.57
MCF2L-230ENST00000491028 BTG4Q9NY30 223 aa24.88■■□□□ 1.57
MCF2L-230ENST00000491028 LTV1Q96GA3 475 aaPredicted RBP24.87■■□□□ 1.57
MCF2L-230ENST00000491028 WDR17Q8IZU2 1322 aa24.86■■□□□ 1.57
MCF2L-230ENST00000491028 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
MCF2L-230ENST00000491028 U2SURPO15042 1029 aaKnown RBP24.86■■□□□ 1.57
MCF2L-230ENST00000491028 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
MCF2L-230ENST00000491028 NCAPD2Q15021 1401 aa24.86■■□□□ 1.57
MCF2L-230ENST00000491028 CSB-PGBD3P0DP91 1061 aa24.84■■□□□ 1.57
MCF2L-230ENST00000491028 FNBP4Q8N3X1 1017 aaPredicted RBP24.84■■□□□ 1.57
MCF2L-230ENST00000491028 NGLY1Q96IV0 654 aa24.84■■□□□ 1.57
MCF2L-230ENST00000491028 U2AF1L5P0DN76 240 aaPredicted RBP24.83■■□□□ 1.57
MCF2L-230ENST00000491028 EVA1CP58658 441 aa24.83■■□□□ 1.57
MCF2L-230ENST00000491028 U2AF1Q01081 240 aaKnown RBP eCLIP24.83■■□□□ 1.57
MCF2L-230ENST00000491028 EYA1Q99502 592 aa24.83■■□□□ 1.57
MCF2L-230ENST00000491028 CRB1P82279 1406 aa24.83■■□□□ 1.57
MCF2L-230ENST00000491028 STRN4Q9NRL3 753 aa24.82■■□□□ 1.56
MCF2L-230ENST00000491028 KDRP35968 1356 aa24.81■■□□□ 1.56
MCF2L-230ENST00000491028 FAM9BQ8IZU0 186 aa24.81■■□□□ 1.56
MCF2L-230ENST00000491028 BCL9LQ86UU0 1499 aa24.81■■□□□ 1.56
MCF2L-230ENST00000491028 NBPF6Q5VWK0 638 aa24.8■■□□□ 1.56
MCF2L-230ENST00000491028 NBPF4Q96M43 638 aa24.8■■□□□ 1.56
MCF2L-230ENST00000491028 ADAMTS8Q9UP79 889 aa24.8■■□□□ 1.56
MCF2L-230ENST00000491028 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
MCF2L-230ENST00000491028 NLRP2Q9NX02 1062 aa24.79■■□□□ 1.56
MCF2L-230ENST00000491028 FCHSD2O94868 740 aa24.78■■□□□ 1.56
MCF2L-230ENST00000491028 LARP1Q6PKG0 1096 aaKnown RBP24.78■■□□□ 1.56
MCF2L-230ENST00000491028 TOM1L2Q6ZVM7 507 aa24.78■■□□□ 1.56
MCF2L-230ENST00000491028 CARD10Q9BWT7 1032 aa24.78■■□□□ 1.56
MCF2L-230ENST00000491028 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
MCF2L-230ENST00000491028 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
MCF2L-230ENST00000491028 AFF2P51816 1311 aa24.77■■□□□ 1.56
MCF2L-230ENST00000491028 RSPH6AQ9H0K4 717 aa24.76■■□□□ 1.55
MCF2L-230ENST00000491028 USP21Q9UK80 565 aa24.76■■□□□ 1.55
MCF2L-230ENST00000491028 WNK3Q9BYP7 1800 aa24.76■■□□□ 1.55
MCF2L-230ENST00000491028 PLEKHG2Q9H7P9 1386 aa24.76■■□□□ 1.55
MCF2L-230ENST00000491028 HMOX1P09601 288 aa24.75■■□□□ 1.55
MCF2L-230ENST00000491028 AEBP1Q8IUX7 1158 aa24.74■■□□□ 1.55
MCF2L-230ENST00000491028 USHBP1Q8N6Y0 703 aa24.74■■□□□ 1.55
MCF2L-230ENST00000491028 PARP4Q9UKK3 1724 aaKnown RBP24.74■■□□□ 1.55
MCF2L-230ENST00000491028 VPS72Q15906 364 aa24.73■■□□□ 1.55
MCF2L-230ENST00000491028 ATRNO75882 1429 aa24.71■■□□□ 1.55
MCF2L-230ENST00000491028 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
MCF2L-230ENST00000491028 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
MCF2L-230ENST00000491028 PRKAR2BP31323 418 aa24.71■■□□□ 1.55
MCF2L-230ENST00000491028 PHF23Q9BUL5 403 aaPredicted RBP24.71■■□□□ 1.55
MCF2L-230ENST00000491028 SPATA31A1Q5TZJ5 1347 aa24.7■■□□□ 1.54
MCF2L-230ENST00000491028 NEFMP07197 916 aa24.7■■□□□ 1.54
MCF2L-230ENST00000491028 RUNDC1Q96C34 613 aa24.7■■□□□ 1.54
MCF2L-230ENST00000491028 PLEKHF1Q96S99 279 aa24.7■■□□□ 1.54
MCF2L-230ENST00000491028 THRAP3Q9Y2W1 955 aaKnown RBP24.7■■□□□ 1.54
MCF2L-230ENST00000491028 MAPK8IP3Q9UPT6 1336 aa24.68■■□□□ 1.54
MCF2L-230ENST00000491028 MEGF6O75095 1541 aa24.68■■□□□ 1.54
MCF2L-230ENST00000491028 RAPGEF4Q8WZA2 1011 aa24.68■■□□□ 1.54
MCF2L-230ENST00000491028 TRPC5Q9UL62 973 aaPredicted RBP24.68■■□□□ 1.54
MCF2L-230ENST00000491028 PKD1L3Q7Z443 1732 aa24.68■■□□□ 1.54
MCF2L-230ENST00000491028 TCP11L2Q8N4U5 519 aa24.67■■□□□ 1.54
MCF2L-230ENST00000491028 DISP2A7MBM2 1401 aa24.67■■□□□ 1.54
MCF2L-230ENST00000491028 TATP17735 454 aaPredicted RBP24.66■■□□□ 1.54
MCF2L-230ENST00000491028 ZNF772Q68DY9 489 aaPredicted RBP24.66■■□□□ 1.54
MCF2L-230ENST00000491028 CCDC146Q8IYE0 955 aa24.66■■□□□ 1.54
MCF2L-230ENST00000491028 CCDC9Q9Y3X0 531 aaKnown RBP24.66■■□□□ 1.54
MCF2L-230ENST00000491028 OVOS2A0A0G2JMS6 1433 aa24.66■■□□□ 1.54
MCF2L-230ENST00000491028 GLI3P10071 1580 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms