RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 NRAPQ86VF7 1730 aa21.52■■□□□ 1.04
TRA2A-208ENST00000490942 FLT4P35916 1363 aa21.52■■□□□ 1.04
TRA2A-208ENST00000490942 LTN1O94822 1766 aa21.52■■□□□ 1.04
TRA2A-208ENST00000490942 VPS72Q15906 364 aa21.52■■□□□ 1.04
TRA2A-208ENST00000490942 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
TRA2A-208ENST00000490942 ATRNO75882 1429 aa21.52■■□□□ 1.04
TRA2A-208ENST00000490942 COL5A2P05997 1499 aaPredicted RBP21.52■■□□□ 1.03
TRA2A-208ENST00000490942 AMPHP49418 695 aa21.51■■□□□ 1.03
TRA2A-208ENST00000490942 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
TRA2A-208ENST00000490942 HOXC9P31274 260 aa21.5■■□□□ 1.03
TRA2A-208ENST00000490942 RRS1Q15050 365 aaKnown RBP21.5■■□□□ 1.03
TRA2A-208ENST00000490942 AXIN2Q9Y2T1 843 aa21.5■■□□□ 1.03
TRA2A-208ENST00000490942 INSRP06213 1382 aa21.48■■□□□ 1.03
TRA2A-208ENST00000490942 EVA1CP58658 441 aa21.48■■□□□ 1.03
TRA2A-208ENST00000490942 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
TRA2A-208ENST00000490942 ERBB3P21860 1342 aa21.48■■□□□ 1.03
TRA2A-208ENST00000490942 WDR17Q8IZU2 1322 aa21.48■■□□□ 1.03
TRA2A-208ENST00000490942 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
TRA2A-208ENST00000490942 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
TRA2A-208ENST00000490942 FBLN1P23142 703 aa21.47■■□□□ 1.03
TRA2A-208ENST00000490942 RALBP1Q15311 655 aa21.47■■□□□ 1.03
TRA2A-208ENST00000490942 CDK12Q9NYV4 1490 aaPredicted RBP21.46■■□□□ 1.03
TRA2A-208ENST00000490942 RBM6P78332 1123 aaKnown RBP21.46■■□□□ 1.03
TRA2A-208ENST00000490942 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
TRA2A-208ENST00000490942 CRB1P82279 1406 aa21.46■■□□□ 1.03
TRA2A-208ENST00000490942 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
TRA2A-208ENST00000490942 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
TRA2A-208ENST00000490942 SPATA31A5Q5VU36 1347 aa21.45■■□□□ 1.02
TRA2A-208ENST00000490942 SPATA31A7Q8IWB4 1347 aa21.45■■□□□ 1.02
TRA2A-208ENST00000490942 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
TRA2A-208ENST00000490942 PEAK1Q9H792 1746 aa21.43■■□□□ 1.02
TRA2A-208ENST00000490942 POTEAQ6S8J7 498 aa21.43■■□□□ 1.02
TRA2A-208ENST00000490942 ANKRD24Q8TF21 1146 aa21.43■■□□□ 1.02
TRA2A-208ENST00000490942 STRN4Q9NRL3 753 aa21.43■■□□□ 1.02
TRA2A-208ENST00000490942 THRAP3Q9Y2W1 955 aaKnown RBP21.43■■□□□ 1.02
TRA2A-208ENST00000490942 RXRBP28702 533 aa21.42■■□□□ 1.02
TRA2A-208ENST00000490942 HSP90AB2PQ58FF8 381 aa21.42■■□□□ 1.02
TRA2A-208ENST00000490942 SPATA31A1Q5TZJ5 1347 aa21.42■■□□□ 1.02
TRA2A-208ENST00000490942 LARP1Q6PKG0 1096 aaKnown RBP21.42■■□□□ 1.02
TRA2A-208ENST00000490942 CARD10Q9BWT7 1032 aa21.42■■□□□ 1.02
TRA2A-208ENST00000490942 FAM208AQ9UK61 1670 aaKnown RBP21.42■■□□□ 1.02
TRA2A-208ENST00000490942 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
TRA2A-208ENST00000490942 PPM1GO15355 546 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-208ENST00000490942 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
TRA2A-208ENST00000490942 PPP2R1AP30153 589 aa21.4■■□□□ 1.02
TRA2A-208ENST00000490942 MTHFSP49914 203 aa21.4■■□□□ 1.02
TRA2A-208ENST00000490942 BARGINQ6ZT62 677 aa21.4■■□□□ 1.02
TRA2A-208ENST00000490942 TOM1L2Q6ZVM7 507 aa21.4■■□□□ 1.02
TRA2A-208ENST00000490942 TCP11L2Q8N4U5 519 aa21.39■■□□□ 1.01
TRA2A-208ENST00000490942 GLI3P10071 1580 aa21.39■■□□□ 1.01
TRA2A-208ENST00000490942 RGPD5Q99666 1765 aa21.38■■□□□ 1.01
TRA2A-208ENST00000490942 CDCA7Q9BWT1 371 aaPredicted RBP21.38■■□□□ 1.01
TRA2A-208ENST00000490942 CCDC9Q9Y3X0 531 aaKnown RBP21.38■■□□□ 1.01
TRA2A-208ENST00000490942 PRKRIP1Q9H875 184 aaPredicted RBP21.37■■□□□ 1.01
TRA2A-208ENST00000490942 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
TRA2A-208ENST00000490942 NLRP2Q9NX02 1062 aa21.35■■□□□ 1.01
TRA2A-208ENST00000490942 NCAPD2Q15021 1401 aa21.35■■□□□ 1.01
TRA2A-208ENST00000490942 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
TRA2A-208ENST00000490942 EIF4A2Q14240 407 aaKnown RBP21.34■■□□□ 1.01
TRA2A-208ENST00000490942 PLEKHG2Q9H7P9 1386 aa21.34■■□□□ 1.01
TRA2A-208ENST00000490942 CNGB1Q14028 1251 aaPredicted RBP21.33■■□□□ 1.01
TRA2A-208ENST00000490942 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1.01
TRA2A-208ENST00000490942 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
TRA2A-208ENST00000490942 IL13P35225 146 aa21.31■■□□□ 1
TRA2A-208ENST00000490942 NBPF6Q5VWK0 638 aa21.31■■□□□ 1
TRA2A-208ENST00000490942 NBPF4Q96M43 638 aa21.31■■□□□ 1
TRA2A-208ENST00000490942 DISP2A7MBM2 1401 aa21.3■■□□□ 1
TRA2A-208ENST00000490942 DIAPH1O60610 1272 aaKnown RBP21.3■■□□□ 1
TRA2A-208ENST00000490942 USP35Q9P2H5 1018 aa21.3■■□□□ 1
TRA2A-208ENST00000490942 THSD7AQ9UPZ6 1657 aa21.3■■□□□ 1
TRA2A-208ENST00000490942 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
TRA2A-208ENST00000490942 ANP32CO43423 234 aa21.29■■□□□ 1
TRA2A-208ENST00000490942 FAM98CQ17RN3 349 aaKnown RBP21.29■■□□□ 1
TRA2A-208ENST00000490942 RGS12O14924 1447 aa21.29■■□□□ 1
TRA2A-208ENST00000490942 EYA1Q99502 592 aa21.28■■□□□ 1
TRA2A-208ENST00000490942 IL2RBP14784 551 aa21.27■■□□□ 1
TRA2A-208ENST00000490942 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
TRA2A-208ENST00000490942 KDRP35968 1356 aa21.26■□□□□ 0.99
TRA2A-208ENST00000490942 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
TRA2A-208ENST00000490942 RGPD1P0DJD0 1748 aa21.26■□□□□ 0.99
TRA2A-208ENST00000490942 PARP4Q9UKK3 1724 aaKnown RBP21.25■□□□□ 0.99
TRA2A-208ENST00000490942 WNK3Q9BYP7 1800 aa21.25■□□□□ 0.99
TRA2A-208ENST00000490942 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
TRA2A-208ENST00000490942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.22■□□□□ 0.999e-10■■■■■ 26.9
TRA2A-208ENST00000490942 RGPD2P0DJD1 1756 aa21.22■□□□□ 0.99
TRA2A-208ENST00000490942 OVOS2A0A0G2JMS6 1433 aa21.21■□□□□ 0.99
TRA2A-208ENST00000490942 DDB1Q16531 1140 aa21.21■□□□□ 0.99
TRA2A-208ENST00000490942 TNS2Q63HR2 1409 aa21.21■□□□□ 0.99
TRA2A-208ENST00000490942 A0A0G2JS52 829 aa21.2■□□□□ 0.98
TRA2A-208ENST00000490942 EXOC5O00471 708 aa21.2■□□□□ 0.98
TRA2A-208ENST00000490942 TATP17735 454 aaPredicted RBP21.2■□□□□ 0.98
TRA2A-208ENST00000490942 MYT1Q01538 1121 aa21.2■□□□□ 0.98
TRA2A-208ENST00000490942 MEGF6O75095 1541 aa21.19■□□□□ 0.98
TRA2A-208ENST00000490942 LRRC37A3O60309 1634 aa21.19■□□□□ 0.98
TRA2A-208ENST00000490942 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
TRA2A-208ENST00000490942 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
TRA2A-208ENST00000490942 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
TRA2A-208ENST00000490942 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
TRA2A-208ENST00000490942 BCL9O00512 1426 aa21.17■□□□□ 0.98
TRA2A-208ENST00000490942 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms