RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 POLKQ9UBT6 870 aa11.3□□□□□ -0.6
SF1-218ENST00000489544 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
SF1-218ENST00000489544 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
SF1-218ENST00000489544 COL14A1Q05707 1796 aaKnown RBP11.29□□□□□ -0.6
SF1-218ENST00000489544 AMPHP49418 695 aa11.29□□□□□ -0.6
SF1-218ENST00000489544 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
SF1-218ENST00000489544 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
SF1-218ENST00000489544 QTRT2Q9H974 415 aaKnown RBP11.29□□□□□ -0.6
SF1-218ENST00000489544 COL18A1P39060 1754 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 LMO7Q8WWI1 1683 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 HOXC9P31274 260 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 EVA1CP58658 441 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
SF1-218ENST00000489544 IP6K1Q92551 441 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SF1-218ENST00000489544 ANKRD26Q9UPS8 1709 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
SF1-218ENST00000489544 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
SF1-218ENST00000489544 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
SF1-218ENST00000489544 LTN1O94822 1766 aa11.27□□□□□ -0.61
SF1-218ENST00000489544 USP35Q9P2H5 1018 aa11.27□□□□□ -0.61
SF1-218ENST00000489544 ATRNO75882 1429 aa11.26□□□□□ -0.61
SF1-218ENST00000489544 NRAPQ86VF7 1730 aa11.26□□□□□ -0.61
SF1-218ENST00000489544 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
SF1-218ENST00000489544 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
SF1-218ENST00000489544 TRPC5Q9UL62 973 aaPredicted RBP11.26□□□□□ -0.61
SF1-218ENST00000489544 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
SF1-218ENST00000489544 MTHFSP49914 203 aa11.25□□□□□ -0.61
SF1-218ENST00000489544 VPS72Q15906 364 aa11.25□□□□□ -0.61
SF1-218ENST00000489544 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
SF1-218ENST00000489544 ERBB3P21860 1342 aa11.25□□□□□ -0.61
SF1-218ENST00000489544 PPP2R1AP30153 589 aa11.24□□□□□ -0.61
SF1-218ENST00000489544 TOM1L2Q6ZVM7 507 aa11.24□□□□□ -0.61
SF1-218ENST00000489544 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
SF1-218ENST00000489544 FLT4P35916 1363 aa11.24□□□□□ -0.61
SF1-218ENST00000489544 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
SF1-218ENST00000489544 RXRBP28702 533 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 NLRP2Q9NX02 1062 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 WDR17Q8IZU2 1322 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 RTL1A6NKG5 1358 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 PARD3Q8TEW0 1356 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
SF1-218ENST00000489544 GLI3P10071 1580 aa11.23□□□□□ -0.61
SF1-218ENST00000489544 INSRP06213 1382 aa11.22□□□□□ -0.61
SF1-218ENST00000489544 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
SF1-218ENST00000489544 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
SF1-218ENST00000489544 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
SF1-218ENST00000489544 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
SF1-218ENST00000489544 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
SF1-218ENST00000489544 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
SF1-218ENST00000489544 ABCC6O95255 1503 aa11.21□□□□□ -0.61
SF1-218ENST00000489544 CRB1P82279 1406 aa11.21□□□□□ -0.61
SF1-218ENST00000489544 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.61
SF1-218ENST00000489544 NBPF4Q96M43 638 aa11.21□□□□□ -0.61
SF1-218ENST00000489544 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
SF1-218ENST00000489544 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
SF1-218ENST00000489544 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
SF1-218ENST00000489544 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
SF1-218ENST00000489544 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
SF1-218ENST00000489544 A0A0G2JS52 829 aa11.19□□□□□ -0.62
SF1-218ENST00000489544 MYT1Q01538 1121 aa11.19□□□□□ -0.62
SF1-218ENST00000489544 RALBP1Q15311 655 aa11.19□□□□□ -0.62
SF1-218ENST00000489544 EYA1Q99502 592 aa11.19□□□□□ -0.62
SF1-218ENST00000489544 RGS12O14924 1447 aa11.18□□□□□ -0.62
SF1-218ENST00000489544 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
SF1-218ENST00000489544 IL13P35225 146 aa11.18□□□□□ -0.62
SF1-218ENST00000489544 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
SF1-218ENST00000489544 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
SF1-218ENST00000489544 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
SF1-218ENST00000489544 MYBBP1AQ9BQG0 1328 aaKnown RBP11.16□□□□□ -0.62
SF1-218ENST00000489544 ANP32CO43423 234 aa11.16□□□□□ -0.62
SF1-218ENST00000489544 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
SF1-218ENST00000489544 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
SF1-218ENST00000489544 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
SF1-218ENST00000489544 FAM182BQ5T319 152 aa11.16□□□□□ -0.62
SF1-218ENST00000489544 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
SF1-218ENST00000489544 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
SF1-218ENST00000489544 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
SF1-218ENST00000489544 HMOX1P09601 288 aa11.15□□□□□ -0.62
SF1-218ENST00000489544 THRAP3Q9Y2W1 955 aaKnown RBP11.15□□□□□ -0.62
SF1-218ENST00000489544 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
SF1-218ENST00000489544 MEGF6O75095 1541 aa11.14□□□□□ -0.63
SF1-218ENST00000489544 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
SF1-218ENST00000489544 IL2RBP14784 551 aa11.14□□□□□ -0.63
SF1-218ENST00000489544 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
SF1-218ENST00000489544 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
SF1-218ENST00000489544 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
SF1-218ENST00000489544 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
SF1-218ENST00000489544 DDB1Q16531 1140 aa11.12□□□□□ -0.63
SF1-218ENST00000489544 DIEXFQ68CQ4 756 aaKnown RBP11.12□□□□□ -0.63
SF1-218ENST00000489544 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
SF1-218ENST00000489544 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
SF1-218ENST00000489544 TATP17735 454 aaPredicted RBP11.11□□□□□ -0.63
SF1-218ENST00000489544 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.632e-19■■□□□ 13.3
SF1-218ENST00000489544 KRT27Q7Z3Y8 459 aa11.11□□□□□ -0.63
SF1-218ENST00000489544 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms