RNA–Protein interactions for RNA: ENST00000489525.5

MDK-209, Transcript of midkine, human

TSL 5

Gene MDK, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDK-209	ENST00000489525	AXIN2	Q9Y2T1	843 aa		33.25	■■■□□ 2.91
MDK-209	ENST00000489525	EMILIN1	Q9Y6C2	1016 aa		33.25	■■■□□ 2.91
MDK-209	ENST00000489525	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.24	■■■□□ 2.91
MDK-209	ENST00000489525	CNGB1	Q14028	1251 aa	Predicted RBP	33.24	■■■□□ 2.91
MDK-209	ENST00000489525	IP6K1	Q92551	441 aa		33.24	■■■□□ 2.91
MDK-209	ENST00000489525	BTG4	Q9NY30	223 aa		33.24	■■■□□ 2.91
MDK-209	ENST00000489525	ZBTB7C	A1YPR0	619 aa		33.23	■■■□□ 2.91
MDK-209	ENST00000489525	BLM	P54132	1417 aa	Predicted RBP	33.23	■■■□□ 2.91
MDK-209	ENST00000489525	FLT4	P35916	1363 aa		33.22	■■■□□ 2.91
MDK-209	ENST00000489525	HOXC9	P31274	260 aa		33.22	■■■□□ 2.91
MDK-209	ENST00000489525	COL5A2	P05997	1499 aa	Predicted RBP	33.21	■■■□□ 2.91
MDK-209	ENST00000489525	AMPH	P49418	695 aa		33.21	■■■□□ 2.91
MDK-209	ENST00000489525	RALBP1	Q15311	655 aa		33.2	■■■□□ 2.91
MDK-209	ENST00000489525	UNC5CL	Q8IV45	518 aa		33.19	■■■□□ 2.9
MDK-209	ENST00000489525	USP21	Q9UK80	565 aa		33.19	■■■□□ 2.9
MDK-209	ENST00000489525	RGPD5	Q99666	1765 aa		33.18	■■■□□ 2.9
MDK-209	ENST00000489525	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.18	■■■□□ 2.9
MDK-209	ENST00000489525	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.17	■■■□□ 2.9
MDK-209	ENST00000489525	RGS17	Q9UGC6	210 aa	Predicted RBP	33.17	■■■□□ 2.9
MDK-209	ENST00000489525	INSR	P06213	1382 aa		33.17	■■■□□ 2.9
MDK-209	ENST00000489525	PPP2R1A	P30153	589 aa		33.16	■■■□□ 2.9
MDK-209	ENST00000489525	ZNF772	Q68DY9	489 aa	Predicted RBP	33.14	■■■□□ 2.9
MDK-209	ENST00000489525	ERBB3	P21860	1342 aa		33.14	■■■□□ 2.9
MDK-209	ENST00000489525	ATRN	O75882	1429 aa		33.14	■■■□□ 2.9
MDK-209	ENST00000489525	MTHFS	P49914	203 aa		33.13	■■■□□ 2.89
MDK-209	ENST00000489525	HSP90AB2P	Q58FF8	381 aa		33.13	■■■□□ 2.89
MDK-209	ENST00000489525	PPM1G	O15355	546 aa	Predicted RBP	33.11	■■■□□ 2.89
MDK-209	ENST00000489525	WDR17	Q8IZU2	1322 aa		33.1	■■■□□ 2.89
MDK-209	ENST00000489525	VPS72	Q15906	364 aa		33.1	■■■□□ 2.89
MDK-209	ENST00000489525	PHF23	Q9BUL5	403 aa	Predicted RBP	33.1	■■■□□ 2.89
MDK-209	ENST00000489525	ANKRD24	Q8TF21	1146 aa		33.09	■■■□□ 2.89
MDK-209	ENST00000489525	STRN4	Q9NRL3	753 aa		33.08	■■■□□ 2.89
MDK-209	ENST00000489525	TRPC5	Q9UL62	973 aa	Predicted RBP	33.08	■■■□□ 2.89
MDK-209	ENST00000489525	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.08	■■■□□ 2.89
MDK-209	ENST00000489525	EVA1C	P58658	441 aa		33.07	■■■□□ 2.88
MDK-209	ENST00000489525	FAM208A	Q9UK61	1670 aa	Known RBP	33.07	■■■□□ 2.88
MDK-209	ENST00000489525	COL3A1	P02461	1466 aa	Predicted RBP	33.06	■■■□□ 2.88
MDK-209	ENST00000489525	LARP1	Q6PKG0	1096 aa	Known RBP	33.06	■■■□□ 2.88
MDK-209	ENST00000489525	CRB1	P82279	1406 aa		33.06	■■■□□ 2.88
MDK-209	ENST00000489525	QTRT2	Q9H974	415 aa	Known RBP	33.04	■■■□□ 2.88
MDK-209	ENST00000489525	SPATA31A5	Q5VU36	1347 aa		33.04	■■■□□ 2.88
MDK-209	ENST00000489525	SPATA31A7	Q8IWB4	1347 aa		33.04	■■■□□ 2.88
MDK-209	ENST00000489525	ANP32C	O43423	234 aa		33.02	■■■□□ 2.88
MDK-209	ENST00000489525	EIF4A2	Q14240	407 aa	Known RBP	33.02	■■■□□ 2.88
MDK-209	ENST00000489525	GLI3	P10071	1580 aa		33.01	■■■□□ 2.88
MDK-209	ENST00000489525	SPATA31A1	Q5TZJ5	1347 aa		33.01	■■■□□ 2.87
MDK-209	ENST00000489525	LTV1	Q96GA3	475 aa	Predicted RBP	33.01	■■■□□ 2.87
MDK-209	ENST00000489525	CSB-PGBD3	P0DP91	1061 aa		33	■■■□□ 2.87
MDK-209	ENST00000489525	POTEA	Q6S8J7	498 aa		33	■■■□□ 2.87
MDK-209	ENST00000489525	GJD4	Q96KN9	370 aa	Predicted RBP	33	■■■□□ 2.87
MDK-209	ENST00000489525	CARD10	Q9BWT7	1032 aa		33	■■■□□ 2.87
MDK-209	ENST00000489525	TOM1L2	Q6ZVM7	507 aa		32.99	■■■□□ 2.87
MDK-209	ENST00000489525	NCAPD2	Q15021	1401 aa		32.98	■■■□□ 2.87
MDK-209	ENST00000489525	IL13	P35225	146 aa		32.97	■■■□□ 2.87
MDK-209	ENST00000489525	DIEXF	Q68CQ4	756 aa	Known RBP	32.96	■■■□□ 2.87
MDK-209	ENST00000489525	CFAP53	Q96M91	514 aa		32.96	■■■□□ 2.87
MDK-209	ENST00000489525	RGPD2	P0DJD1	1756 aa		32.96	■■■□□ 2.87
MDK-209	ENST00000489525	RGPD1	P0DJD0	1748 aa		32.95	■■■□□ 2.87
MDK-209	ENST00000489525	NBPF6	Q5VWK0	638 aa		32.95	■■■□□ 2.86
MDK-209	ENST00000489525	NBPF4	Q96M43	638 aa		32.95	■■■□□ 2.86
MDK-209	ENST00000489525	RBM6	P78332	1123 aa	Known RBP	32.94	■■■□□ 2.86
MDK-209	ENST00000489525	NLRP2	Q9NX02	1062 aa		32.94	■■■□□ 2.86
MDK-209	ENST00000489525	THRAP3	Q9Y2W1	955 aa	Known RBP	32.94	■■■□□ 2.86
MDK-209	ENST00000489525	CCDC9	Q9Y3X0	531 aa	Known RBP	32.94	■■■□□ 2.86
MDK-209	ENST00000489525	DIAPH1	O60610	1272 aa	Known RBP	32.93	■■■□□ 2.86
MDK-209	ENST00000489525	TCP11L2	Q8N4U5	519 aa		32.92	■■■□□ 2.86
MDK-209	ENST00000489525	EYA1	Q99502	592 aa		32.92	■■■□□ 2.86
MDK-209	ENST00000489525	IGSF1	Q8N6C5	1336 aa		32.92	■■■□□ 2.86
MDK-209	ENST00000489525	BARGIN	Q6ZT62	677 aa		32.91	■■■□□ 2.86
MDK-209	ENST00000489525	ONECUT3	O60422	494 aa	Predicted RBP	32.89	■■■□□ 2.86
MDK-209	ENST00000489525	USP35	Q9P2H5	1018 aa		32.89	■■■□□ 2.86
MDK-209	ENST00000489525	DISP2	A7MBM2	1401 aa		32.89	■■■□□ 2.86
MDK-209	ENST00000489525	WNK3	Q9BYP7	1800 aa		32.89	■■■□□ 2.86
MDK-209	ENST00000489525	RXRB	P28702	533 aa		32.88	■■■□□ 2.85
MDK-209	ENST00000489525	THSD7A	Q9UPZ6	1657 aa		32.87	■■■□□ 2.85
MDK-209	ENST00000489525	KDR	P35968	1356 aa		32.84	■■■□□ 2.85
MDK-209	ENST00000489525	FAM98C	Q17RN3	349 aa	Known RBP	32.83	■■■□□ 2.85
MDK-209	ENST00000489525	USHBP1	Q8N6Y0	703 aa		32.83	■■■□□ 2.85
MDK-209	ENST00000489525	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.8	■■■□□ 2.84
MDK-209	ENST00000489525	NUDC	Q9Y266	331 aa		32.8	■■■□□ 2.84
MDK-209	ENST00000489525	PARP4	Q9UKK3	1724 aa	Known RBP	32.8	■■■□□ 2.84
MDK-209	ENST00000489525	MEGF6	O75095	1541 aa		32.79	■■■□□ 2.84
MDK-209	ENST00000489525	RGS12	O14924	1447 aa		32.79	■■■□□ 2.84
MDK-209	ENST00000489525	IL2RB	P14784	551 aa		32.78	■■■□□ 2.84
MDK-209	ENST00000489525	PLEKHG2	Q9H7P9	1386 aa		32.78	■■■□□ 2.84
MDK-209	ENST00000489525	CCDC184	Q52MB2	194 aa		32.77	■■■□□ 2.84
MDK-209	ENST00000489525	AEBP1	Q8IUX7	1158 aa		32.77	■■■□□ 2.84
MDK-209	ENST00000489525	OVOS2	A0A0G2JMS6	1433 aa		32.76	■■■□□ 2.83
MDK-209	ENST00000489525	LRRC37A3	O60309	1634 aa		32.76	■■■□□ 2.83
MDK-209	ENST00000489525	U2SURP	O15042	1029 aa	Known RBP	32.76	■■■□□ 2.83
MDK-209	ENST00000489525	SULT6B1	Q6IMI4	303 aa		32.76	■■■□□ 2.83
MDK-209	ENST00000489525	SEPT12	Q8IYM1	358 aa		32.75	■■■□□ 2.83
MDK-209	ENST00000489525	RAPGEF4	Q8WZA2	1011 aa		32.73	■■■□□ 2.83
MDK-209	ENST00000489525	TNS2	Q63HR2	1409 aa		32.7	■■■□□ 2.83
MDK-209	ENST00000489525	HMOX1	P09601	288 aa		32.7	■■■□□ 2.82
MDK-209	ENST00000489525	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.7	■■■□□ 2.82
MDK-209	ENST00000489525	TAT	P17735	454 aa	Predicted RBP	32.7	■■■□□ 2.82
MDK-209	ENST00000489525	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.7	■■■□□ 2.82
MDK-209	ENST00000489525	PKD1L3	Q7Z443	1732 aa		32.7	■■■□□ 2.82
MDK-209	ENST00000489525	MRS2	Q9HD23	443 aa		32.69	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms