RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
CCDC93-209ENST00000488908 RNF225M0QZC1 329 aaPredicted RBP7.83□□□□□ -1.16
CCDC93-209ENST00000488908 KRT76Q01546 638 aa7.83□□□□□ -1.16
CCDC93-209ENST00000488908 Q6ZVU0 165 aa7.83□□□□□ -1.16
CCDC93-209ENST00000488908 GPR161Q8N6U8 529 aaKnown RBP7.83□□□□□ -1.16
CCDC93-209ENST00000488908 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
CCDC93-209ENST00000488908 CDV3Q9UKY7 258 aaKnown RBP7.83□□□□□ -1.16
CCDC93-209ENST00000488908 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
CCDC93-209ENST00000488908 SPINT1O43278 529 aa7.82□□□□□ -1.16
CCDC93-209ENST00000488908 KCTD17Q8N5Z5 321 aa7.82□□□□□ -1.16
CCDC93-209ENST00000488908 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
CCDC93-209ENST00000488908 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
CCDC93-209ENST00000488908 RSPH6AQ9H0K4 717 aa7.82□□□□□ -1.16
CCDC93-209ENST00000488908 GSK3AP49840 483 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 DHX9Q08211 1270 aaKnown RBP7.81□□□□□ -1.16
CCDC93-209ENST00000488908 CBLBQ13191 982 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 PDXDC2PQ6P474 469 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
CCDC93-209ENST00000488908 COL25A1Q9BXS0 654 aaPredicted RBP7.81□□□□□ -1.16
CCDC93-209ENST00000488908 KCTD15Q96SI1 283 aaPredicted RBP7.8□□□□□ -1.16
CCDC93-209ENST00000488908 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
CCDC93-209ENST00000488908 GDF11O95390 407 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 RASSF7Q02833 373 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 CTDSPL2Q05D32 466 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
CCDC93-209ENST00000488908 ZBTB33Q86T24 672 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 POLR3EQ9NVU0 708 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 FKBPLQ9UIM3 349 aa7.79□□□□□ -1.16
CCDC93-209ENST00000488908 SLC35F4A4IF30 521 aa7.78□□□□□ -1.16
CCDC93-209ENST00000488908 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
CCDC93-209ENST00000488908 ITGA6P23229 1130 aa7.77□□□□□ -1.17
CCDC93-209ENST00000488908 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
CCDC93-209ENST00000488908 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
CCDC93-209ENST00000488908 ZNF385CQ66K41 422 aaPredicted RBP7.76□□□□□ -1.17
CCDC93-209ENST00000488908 CDC14CA4D256 554 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 CTSOP43234 321 aaPredicted RBP7.75□□□□□ -1.17
CCDC93-209ENST00000488908 RELBQ01201 579 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 INTS6LQ5JSJ4 861 aaKnown RBP7.75□□□□□ -1.17
CCDC93-209ENST00000488908 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 LRRN4Q8WUT4 740 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 AGBL1Q96MI9 1066 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 INSM2Q96T92 566 aaPredicted RBP7.75□□□□□ -1.17
CCDC93-209ENST00000488908 SLC24A3Q9HC58 644 aa7.75□□□□□ -1.17
CCDC93-209ENST00000488908 SLURP2P0DP57 97 aa7.74□□□□□ -1.17
CCDC93-209ENST00000488908 PTK2Q05397 1052 aa7.74□□□□□ -1.17
CCDC93-209ENST00000488908 VWA5B2Q8N398 1253 aa7.74□□□□□ -1.17
CCDC93-209ENST00000488908 POLMQ9NP87 494 aaPredicted RBP7.74□□□□□ -1.17
CCDC93-209ENST00000488908 NR6A1Q15406 480 aa7.73□□□□□ -1.17
CCDC93-209ENST00000488908 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
CCDC93-209ENST00000488908 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
CCDC93-209ENST00000488908 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
CCDC93-209ENST00000488908 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
CCDC93-209ENST00000488908 WHAMMQ8TF30 809 aa7.71□□□□□ -1.18
CCDC93-209ENST00000488908 ZNF395Q9H8N7 513 aaPredicted RBP7.71□□□□□ -1.18
CCDC93-209ENST00000488908 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
CCDC93-209ENST00000488908 MARSP56192 900 aaKnown RBP7.7□□□□□ -1.18
CCDC93-209ENST00000488908 SKIV2LQ15477 1246 aaKnown RBP7.7□□□□□ -1.18
CCDC93-209ENST00000488908 ZNF784Q8NCA9 323 aaPredicted RBP7.7□□□□□ -1.18
CCDC93-209ENST00000488908 PNMA1Q8ND90 353 aa7.7□□□□□ -1.18
CCDC93-209ENST00000488908 OCSTAMPQ9BR26 566 aa7.7□□□□□ -1.18
CCDC93-209ENST00000488908 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
CCDC93-209ENST00000488908 SENP3-EIF4A1A0A087X0R7 540 aa7.69□□□□□ -1.18
CCDC93-209ENST00000488908 ADH1AP07327 375 aa7.69□□□□□ -1.18
CCDC93-209ENST00000488908 IRS1P35568 1242 aa7.69□□□□□ -1.18
CCDC93-209ENST00000488908 KANK3Q6NY19 840 aa7.69□□□□□ -1.18
CCDC93-209ENST00000488908 TMPRSS4Q9NRS4 437 aa7.69□□□□□ -1.18
CCDC93-209ENST00000488908 ATP1B4Q9UN42 357 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-209ENST00000488908 RAB15P59190 212 aa7.68□□□□□ -1.18
CCDC93-209ENST00000488908 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
CCDC93-209ENST00000488908 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
CCDC93-209ENST00000488908 ADAMTS2O95450 1211 aa7.67□□□□□ -1.18
CCDC93-209ENST00000488908 IGHA1P01876 353 aa7.67□□□□□ -1.18
CCDC93-209ENST00000488908 MAP3K10Q02779 954 aa7.67□□□□□ -1.18
CCDC93-209ENST00000488908 SRSF11Q05519 484 aaKnown RBP7.67□□□□□ -1.18
CCDC93-209ENST00000488908 SH3D19Q5HYK7 790 aa7.67□□□□□ -1.18
CCDC93-209ENST00000488908 DZIP3Q86Y13 1208 aaKnown RBP7.67□□□□□ -1.18
CCDC93-209ENST00000488908 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
CCDC93-209ENST00000488908 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCDC93-209ENST00000488908 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 AP1G2O75843 785 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 PTGIRP43119 386 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 FOXK2Q01167 660 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
CCDC93-209ENST00000488908 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
CCDC93-209ENST00000488908 LILRA1O75019 489 aa7.65□□□□□ -1.18
CCDC93-209ENST00000488908 FBXO31Q5XUX0 539 aaPredicted RBP7.65□□□□□ -1.18
CCDC93-209ENST00000488908 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
CCDC93-209ENST00000488908 ADD1P35611 737 aaKnown RBP7.64□□□□□ -1.19
CCDC93-209ENST00000488908 LYPD4Q6UWN0 246 aa7.64□□□□□ -1.19
CCDC93-209ENST00000488908 DDRGK1Q96HY6 314 aa7.64□□□□□ -1.19
CCDC93-209ENST00000488908 ENAMQ9NRM1 1142 aa7.64□□□□□ -1.19
CCDC93-209ENST00000488908 SEPT12Q8IYM1 358 aa7.63□□□□□ -1.19
CCDC93-209ENST00000488908 KDF1Q8NAX2 398 aaPredicted RBP7.63□□□□□ -1.19
CCDC93-209ENST00000488908 EPS8L1Q8TE68 723 aa7.63□□□□□ -1.19
CCDC93-209ENST00000488908 ESPNB1AK53 854 aa7.62□□□□□ -1.19
CCDC93-209ENST00000488908 CELA2BP08218 269 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-209ENST00000488908 GAS6Q14393 721 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms