RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 COL18A1P39060 1754 aa15.47■□□□□ 0.07
NUP50-216ENST00000486184 AFF2P51816 1311 aa15.46■□□□□ 0.07
NUP50-216ENST00000486184 FAM83GA6ND36 823 aa15.46■□□□□ 0.07
NUP50-216ENST00000486184 AMPHP49418 695 aa15.46■□□□□ 0.07
NUP50-216ENST00000486184 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
NUP50-216ENST00000486184 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
NUP50-216ENST00000486184 RTL1A6NKG5 1358 aa15.45■□□□□ 0.06
NUP50-216ENST00000486184 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
NUP50-216ENST00000486184 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
NUP50-216ENST00000486184 SLIT2O94813 1529 aa15.44■□□□□ 0.06
NUP50-216ENST00000486184 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
NUP50-216ENST00000486184 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
NUP50-216ENST00000486184 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
NUP50-216ENST00000486184 USP21Q9UK80 565 aa15.44■□□□□ 0.06
NUP50-216ENST00000486184 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
NUP50-216ENST00000486184 PEAK1Q9H792 1746 aa15.43■□□□□ 0.06
NUP50-216ENST00000486184 EVA1CP58658 441 aa15.43■□□□□ 0.06
NUP50-216ENST00000486184 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
NUP50-216ENST00000486184 CAMTA1Q9Y6Y1 1673 aa15.42■□□□□ 0.06
NUP50-216ENST00000486184 FLT4P35916 1363 aa15.42■□□□□ 0.06
NUP50-216ENST00000486184 KIF24Q5T7B8 1368 aa15.42■□□□□ 0.06
NUP50-216ENST00000486184 FBLN1P23142 703 aa15.42■□□□□ 0.06
NUP50-216ENST00000486184 FNBP4Q8N3X1 1017 aaPredicted RBP15.42■□□□□ 0.06
NUP50-216ENST00000486184 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
NUP50-216ENST00000486184 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
NUP50-216ENST00000486184 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
NUP50-216ENST00000486184 UNC5CLQ8IV45 518 aa15.41■□□□□ 0.06
NUP50-216ENST00000486184 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
NUP50-216ENST00000486184 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
NUP50-216ENST00000486184 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
NUP50-216ENST00000486184 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
NUP50-216ENST00000486184 HOXC9P31274 260 aa15.4■□□□□ 0.06
NUP50-216ENST00000486184 IP6K1Q92551 441 aa15.4■□□□□ 0.06
NUP50-216ENST00000486184 CDK12Q9NYV4 1490 aaPredicted RBP15.4■□□□□ 0.06
NUP50-216ENST00000486184 RALBP1Q15311 655 aa15.39■□□□□ 0.05
NUP50-216ENST00000486184 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
NUP50-216ENST00000486184 TRPC5Q9UL62 973 aaPredicted RBP15.39■□□□□ 0.05
NUP50-216ENST00000486184 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
NUP50-216ENST00000486184 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
NUP50-216ENST00000486184 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
NUP50-216ENST00000486184 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
NUP50-216ENST00000486184 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
NUP50-216ENST00000486184 QTRT2Q9H974 415 aaKnown RBP15.37■□□□□ 0.05
NUP50-216ENST00000486184 WNK3Q9BYP7 1800 aa15.37■□□□□ 0.05
NUP50-216ENST00000486184 INSRP06213 1382 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 ATRNO75882 1429 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 CRB1P82279 1406 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 ANP32CO43423 234 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 CFAP53Q96M91 514 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 ERBB3P21860 1342 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
NUP50-216ENST00000486184 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
NUP50-216ENST00000486184 MTHFSP49914 203 aa15.35■□□□□ 0.05
NUP50-216ENST00000486184 VPS72Q15906 364 aa15.35■□□□□ 0.05
NUP50-216ENST00000486184 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
NUP50-216ENST00000486184 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
NUP50-216ENST00000486184 NLRP2Q9NX02 1062 aa15.34■□□□□ 0.05
NUP50-216ENST00000486184 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
NUP50-216ENST00000486184 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
NUP50-216ENST00000486184 GLI3P10071 1580 aa15.33■□□□□ 0.05
NUP50-216ENST00000486184 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
NUP50-216ENST00000486184 RXRBP28702 533 aa15.32■□□□□ 0.04
NUP50-216ENST00000486184 RBM6P78332 1123 aaKnown RBP15.32■□□□□ 0.04
NUP50-216ENST00000486184 GJD4Q96KN9 370 aaPredicted RBP15.32■□□□□ 0.04
NUP50-216ENST00000486184 RGS17Q9UGC6 210 aaPredicted RBP15.32■□□□□ 0.04
NUP50-216ENST00000486184 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
NUP50-216ENST00000486184 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
NUP50-216ENST00000486184 A0A0G2JS52 829 aa15.31■□□□□ 0.04
NUP50-216ENST00000486184 MYT1Q01538 1121 aa15.31■□□□□ 0.04
NUP50-216ENST00000486184 SPATA31A1Q5TZJ5 1347 aa15.31■□□□□ 0.04
NUP50-216ENST00000486184 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
NUP50-216ENST00000486184 POTEAQ6S8J7 498 aa15.3■□□□□ 0.04
NUP50-216ENST00000486184 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
NUP50-216ENST00000486184 CARD10Q9BWT7 1032 aa15.3■□□□□ 0.04
NUP50-216ENST00000486184 DIAPH1O60610 1272 aaKnown RBP15.29■□□□□ 0.04
NUP50-216ENST00000486184 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
NUP50-216ENST00000486184 THRAP3Q9Y2W1 955 aaKnown RBP15.29■□□□□ 0.04
NUP50-216ENST00000486184 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
NUP50-216ENST00000486184 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
NUP50-216ENST00000486184 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
NUP50-216ENST00000486184 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
NUP50-216ENST00000486184 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
NUP50-216ENST00000486184 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
NUP50-216ENST00000486184 BRWD3Q6RI45 1802 aa15.27■□□□□ 0.03
NUP50-216ENST00000486184 NBPF6Q5VWK0 638 aa15.26■□□□□ 0.03
NUP50-216ENST00000486184 NBPF4Q96M43 638 aa15.26■□□□□ 0.03
NUP50-216ENST00000486184 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
NUP50-216ENST00000486184 U2SURPO15042 1029 aaKnown RBP15.25■□□□□ 0.03
NUP50-216ENST00000486184 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
NUP50-216ENST00000486184 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
NUP50-216ENST00000486184 CDCA7Q9BWT1 371 aaPredicted RBP15.25■□□□□ 0.03
NUP50-216ENST00000486184 IL2RBP14784 551 aa15.24■□□□□ 0.03
NUP50-216ENST00000486184 IL13P35225 146 aa15.24■□□□□ 0.03
NUP50-216ENST00000486184 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
NUP50-216ENST00000486184 EYA1Q99502 592 aa15.24■□□□□ 0.03
NUP50-216ENST00000486184 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
NUP50-216ENST00000486184 RGS12O14924 1447 aa15.23■□□□□ 0.03
NUP50-216ENST00000486184 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
NUP50-216ENST00000486184 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms