RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 IP6K1Q92551 441 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-223ENST00000485796 MTHFSP49914 203 aa17.22■□□□□ 0.35
HDAC7-223ENST00000485796 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-223ENST00000485796 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
HDAC7-223ENST00000485796 USP21Q9UK80 565 aa17.22■□□□□ 0.35
HDAC7-223ENST00000485796 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
HDAC7-223ENST00000485796 LTN1O94822 1766 aa17.22■□□□□ 0.35
HDAC7-223ENST00000485796 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
HDAC7-223ENST00000485796 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
HDAC7-223ENST00000485796 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
HDAC7-223ENST00000485796 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
HDAC7-223ENST00000485796 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
HDAC7-223ENST00000485796 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
HDAC7-223ENST00000485796 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
HDAC7-223ENST00000485796 RALBP1Q15311 655 aa17.19■□□□□ 0.34
HDAC7-223ENST00000485796 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
HDAC7-223ENST00000485796 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
HDAC7-223ENST00000485796 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
HDAC7-223ENST00000485796 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-223ENST00000485796 FLT4P35916 1363 aa17.18■□□□□ 0.34
HDAC7-223ENST00000485796 EVA1CP58658 441 aa17.18■□□□□ 0.34
HDAC7-223ENST00000485796 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
HDAC7-223ENST00000485796 NRAPQ86VF7 1730 aa17.17■□□□□ 0.34
HDAC7-223ENST00000485796 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-223ENST00000485796 QTRT2Q9H974 415 aaKnown RBP17.17■□□□□ 0.34
HDAC7-223ENST00000485796 INSRP06213 1382 aa17.16■□□□□ 0.34
HDAC7-223ENST00000485796 ANP32CO43423 234 aa17.16■□□□□ 0.34
HDAC7-223ENST00000485796 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
HDAC7-223ENST00000485796 ERBB3P21860 1342 aa17.16■□□□□ 0.34
HDAC7-223ENST00000485796 ATRNO75882 1429 aa17.15■□□□□ 0.34
HDAC7-223ENST00000485796 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
HDAC7-223ENST00000485796 VPS72Q15906 364 aa17.15■□□□□ 0.34
HDAC7-223ENST00000485796 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
HDAC7-223ENST00000485796 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
HDAC7-223ENST00000485796 BLMP54132 1417 aaPredicted RBP17.14■□□□□ 0.33
HDAC7-223ENST00000485796 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 USP35Q9P2H5 1018 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
HDAC7-223ENST00000485796 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
HDAC7-223ENST00000485796 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-223ENST00000485796 ABCC6O95255 1503 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 IL13P35225 146 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-223ENST00000485796 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-223ENST00000485796 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
HDAC7-223ENST00000485796 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
HDAC7-223ENST00000485796 COL3A1P02461 1466 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-223ENST00000485796 GJD4Q96KN9 370 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-223ENST00000485796 EYA1Q99502 592 aa17.11■□□□□ 0.33
HDAC7-223ENST00000485796 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
HDAC7-223ENST00000485796 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
HDAC7-223ENST00000485796 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
HDAC7-223ENST00000485796 CRB1P82279 1406 aa17.09■□□□□ 0.33
HDAC7-223ENST00000485796 GLI3P10071 1580 aa17.09■□□□□ 0.33
HDAC7-223ENST00000485796 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
HDAC7-223ENST00000485796 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
HDAC7-223ENST00000485796 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
HDAC7-223ENST00000485796 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
HDAC7-223ENST00000485796 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
HDAC7-223ENST00000485796 MIER1Q8N108 512 aa17.06■□□□□ 0.32
HDAC7-223ENST00000485796 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
HDAC7-223ENST00000485796 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
HDAC7-223ENST00000485796 RXRBP28702 533 aa17.05■□□□□ 0.32
HDAC7-223ENST00000485796 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
HDAC7-223ENST00000485796 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
HDAC7-223ENST00000485796 HMOX1P09601 288 aa17.04■□□□□ 0.32
HDAC7-223ENST00000485796 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
HDAC7-223ENST00000485796 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
HDAC7-223ENST00000485796 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
HDAC7-223ENST00000485796 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
HDAC7-223ENST00000485796 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
HDAC7-223ENST00000485796 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
HDAC7-223ENST00000485796 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
HDAC7-223ENST00000485796 MEGF6O75095 1541 aa17.01■□□□□ 0.31
HDAC7-223ENST00000485796 SEPT12Q8IYM1 358 aa17.01■□□□□ 0.31
HDAC7-223ENST00000485796 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
HDAC7-223ENST00000485796 RGS12O14924 1447 aa17■□□□□ 0.31
HDAC7-223ENST00000485796 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
HDAC7-223ENST00000485796 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC7-223ENST00000485796 MRS2Q9HD23 443 aa17■□□□□ 0.31
HDAC7-223ENST00000485796 IL2RBP14784 551 aa16.99■□□□□ 0.31
HDAC7-223ENST00000485796 A0A0G2JS52 829 aa16.98■□□□□ 0.31
HDAC7-223ENST00000485796 MYT1Q01538 1121 aa16.98■□□□□ 0.31
HDAC7-223ENST00000485796 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
HDAC7-223ENST00000485796 KDRP35968 1356 aa16.98■□□□□ 0.31
HDAC7-223ENST00000485796 RSPH6AQ9H0K4 717 aa16.97■□□□□ 0.31
HDAC7-223ENST00000485796 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
HDAC7-223ENST00000485796 TATP17735 454 aaPredicted RBP16.96■□□□□ 0.31
HDAC7-223ENST00000485796 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
HDAC7-223ENST00000485796 ILDR2Q71H61 639 aa16.96■□□□□ 0.31
HDAC7-223ENST00000485796 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
HDAC7-223ENST00000485796 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
HDAC7-223ENST00000485796 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms