RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 KRT76Q01546 638 aa8.18□□□□□ -1.1
SPTA1-206ENST00000484520 PTSQ03393 145 aa8.18□□□□□ -1.1
SPTA1-206ENST00000484520 KCNMA1Q12791 1236 aa8.18□□□□□ -1.1
SPTA1-206ENST00000484520 PPP1R26Q5T8A7 1209 aaPredicted RBP8.18□□□□□ -1.1
SPTA1-206ENST00000484520 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
SPTA1-206ENST00000484520 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
SPTA1-206ENST00000484520 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
SPTA1-206ENST00000484520 CTDSPL2Q05D32 466 aa8.17□□□□□ -1.1
SPTA1-206ENST00000484520 POLR3EQ9NVU0 708 aa8.17□□□□□ -1.1
SPTA1-206ENST00000484520 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
SPTA1-206ENST00000484520 GSK3AP49840 483 aa8.15□□□□□ -1.1
SPTA1-206ENST00000484520 Q6ZVU0 165 aa8.15□□□□□ -1.1
SPTA1-206ENST00000484520 KCTD17Q8N5Z5 321 aa8.15□□□□□ -1.1
SPTA1-206ENST00000484520 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
SPTA1-206ENST00000484520 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.1
SPTA1-206ENST00000484520 SPINT1O43278 529 aa8.14□□□□□ -1.11
SPTA1-206ENST00000484520 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
SPTA1-206ENST00000484520 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
SPTA1-206ENST00000484520 KCTD15Q96SI1 283 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-206ENST00000484520 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-206ENST00000484520 RSPH6AQ9H0K4 717 aa8.14□□□□□ -1.11
SPTA1-206ENST00000484520 LRRN4Q8WUT4 740 aa8.13□□□□□ -1.11
SPTA1-206ENST00000484520 SLC10A4Q96EP9 437 aa8.13□□□□□ -1.11
SPTA1-206ENST00000484520 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
SPTA1-206ENST00000484520 NANOS1Q8WY41 292 aaKnown RBP8.12□□□□□ -1.11
SPTA1-206ENST00000484520 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
SPTA1-206ENST00000484520 FKBPLQ9UIM3 349 aa8.12□□□□□ -1.11
SPTA1-206ENST00000484520 ADAMTS8Q9UP79 889 aa8.12□□□□□ -1.11
SPTA1-206ENST00000484520 ABCC9O60706 1549 aa8.12□□□□□ -1.11
SPTA1-206ENST00000484520 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
SPTA1-206ENST00000484520 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
SPTA1-206ENST00000484520 RNFT1Q5M7Z0 435 aa8.11□□□□□ -1.11
SPTA1-206ENST00000484520 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
SPTA1-206ENST00000484520 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
SPTA1-206ENST00000484520 CTSOP43234 321 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-206ENST00000484520 RELBQ01201 579 aa8.1□□□□□ -1.11
SPTA1-206ENST00000484520 RASSF7Q02833 373 aa8.1□□□□□ -1.11
SPTA1-206ENST00000484520 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
SPTA1-206ENST00000484520 GDF11O95390 407 aa8.09□□□□□ -1.11
SPTA1-206ENST00000484520 NR6A1Q15406 480 aa8.09□□□□□ -1.11
SPTA1-206ENST00000484520 INTS6LQ5JSJ4 861 aaKnown RBP8.09□□□□□ -1.11
SPTA1-206ENST00000484520 ZNF385CQ66K41 422 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-206ENST00000484520 VWA5B2Q8N398 1253 aa8.09□□□□□ -1.11
SPTA1-206ENST00000484520 INSM2Q96T92 566 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-206ENST00000484520 CDC14CA4D256 554 aa8.08□□□□□ -1.12
SPTA1-206ENST00000484520 ITGA6P23229 1130 aa8.08□□□□□ -1.12
SPTA1-206ENST00000484520 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-206ENST00000484520 SVOPQ8N4V2 548 aa8.08□□□□□ -1.12
SPTA1-206ENST00000484520 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
SPTA1-206ENST00000484520 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
SPTA1-206ENST00000484520 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-206ENST00000484520 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
SPTA1-206ENST00000484520 ZNF395Q9H8N7 513 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-206ENST00000484520 POLMQ9NP87 494 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-206ENST00000484520 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
SPTA1-206ENST00000484520 PTK2Q05397 1052 aa8.06□□□□□ -1.12
SPTA1-206ENST00000484520 SV2AQ7L0J3 742 aa8.06□□□□□ -1.12
SPTA1-206ENST00000484520 TMPRSS4Q9NRS4 437 aa8.06□□□□□ -1.12
SPTA1-206ENST00000484520 RAB15P59190 212 aa8.05□□□□□ -1.12
SPTA1-206ENST00000484520 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
SPTA1-206ENST00000484520 PROCA1Q8NCQ7 364 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-206ENST00000484520 ADAM32Q8TC27 787 aa8.05□□□□□ -1.12
SPTA1-206ENST00000484520 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
SPTA1-206ENST00000484520 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
SPTA1-206ENST00000484520 ATP1B4Q9UN42 357 aaPredicted RBP8.04□□□□□ -1.12
SPTA1-206ENST00000484520 DCAF1Q9Y4B6 1507 aa8.03□□□□□ -1.12
SPTA1-206ENST00000484520 SENP3-EIF4A1A0A087X0R7 540 aa8.03□□□□□ -1.12
SPTA1-206ENST00000484520 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
SPTA1-206ENST00000484520 GPSM3Q9Y4H4 160 aa8.03□□□□□ -1.12
SPTA1-206ENST00000484520 AP1G2O75843 785 aa8.02□□□□□ -1.13
SPTA1-206ENST00000484520 ARHGEF15O94989 841 aa8.02□□□□□ -1.13
SPTA1-206ENST00000484520 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
SPTA1-206ENST00000484520 EPS8L1Q8TE68 723 aa8.02□□□□□ -1.13
SPTA1-206ENST00000484520 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPTA1-206ENST00000484520 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
SPTA1-206ENST00000484520 ADH1AP07327 375 aa8.01□□□□□ -1.13
SPTA1-206ENST00000484520 IRS1P35568 1242 aa8.01□□□□□ -1.13
SPTA1-206ENST00000484520 ADD1P35611 737 aaKnown RBP8.01□□□□□ -1.13
SPTA1-206ENST00000484520 SH3D19Q5HYK7 790 aa8.01□□□□□ -1.13
SPTA1-206ENST00000484520 FOXD4L5Q5VV16 416 aaPredicted RBP8.01□□□□□ -1.13
SPTA1-206ENST00000484520 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
SPTA1-206ENST00000484520 LILRA1O75019 489 aa8□□□□□ -1.13
SPTA1-206ENST00000484520 MARSP56192 900 aaKnown RBP8□□□□□ -1.13
SPTA1-206ENST00000484520 DZIP3Q86Y13 1208 aaKnown RBP8□□□□□ -1.13
SPTA1-206ENST00000484520 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
SPTA1-206ENST00000484520 MYO15BQ96JP2 1530 aa7.99□□□□□ -1.13
SPTA1-206ENST00000484520 ADAMTS2O95450 1211 aa7.99□□□□□ -1.13
SPTA1-206ENST00000484520 PTGIRP43119 386 aa7.99□□□□□ -1.13
SPTA1-206ENST00000484520 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
SPTA1-206ENST00000484520 LYPD4Q6UWN0 246 aa7.98□□□□□ -1.13
SPTA1-206ENST00000484520 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
SPTA1-206ENST00000484520 FAM117AQ9C073 453 aa7.98□□□□□ -1.13
SPTA1-206ENST00000484520 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
SPTA1-206ENST00000484520 CUEDC1Q9NWM3 386 aaPredicted RBP7.98□□□□□ -1.13
SPTA1-206ENST00000484520 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
SPTA1-206ENST00000484520 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
SPTA1-206ENST00000484520 DNMT3AQ9Y6K1 912 aaPredicted RBP7.97□□□□□ -1.13
SPTA1-206ENST00000484520 ESPNB1AK53 854 aa7.96□□□□□ -1.14
SPTA1-206ENST00000484520 USP17L8P0C7I0 530 aa7.96□□□□□ -1.14
SPTA1-206ENST00000484520 SRSF11Q05519 484 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms