RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
NCL-209ENST00000484328 PPP2R1AP30153 589 aa8.73□□□□□ -1.01
NCL-209ENST00000484328 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
NCL-209ENST00000484328 BCL9LQ86UU0 1499 aa8.72□□□□□ -1.01
NCL-209ENST00000484328 FBLN1P23142 703 aa8.72□□□□□ -1.01
NCL-209ENST00000484328 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
NCL-209ENST00000484328 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
NCL-209ENST00000484328 EMILIN1Q9Y6C2 1016 aa8.72□□□□□ -1.01
NCL-209ENST00000484328 SOX12O15370 315 aa8.71□□□□□ -1.02
NCL-209ENST00000484328 HOXC9P31274 260 aa8.71□□□□□ -1.02
NCL-209ENST00000484328 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
NCL-209ENST00000484328 ZC3H6P61129 1189 aaKnown RBP8.71□□□□□ -1.02
NCL-209ENST00000484328 IP6K1Q92551 441 aa8.71□□□□□ -1.02
NCL-209ENST00000484328 PRDM11Q9NQV5 511 aa8.71□□□□□ -1.02
NCL-209ENST00000484328 ERBB3P21860 1342 aa8.71□□□□□ -1.02
NCL-209ENST00000484328 PARP4Q9UKK3 1724 aaKnown RBP8.71□□□□□ -1.02
NCL-209ENST00000484328 GLI3P10071 1580 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 THSD7AQ9UPZ6 1657 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
NCL-209ENST00000484328 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
NCL-209ENST00000484328 ANP32CO43423 234 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 TNNT2P45379 298 aaPredicted RBP8.7□□□□□ -1.02
NCL-209ENST00000484328 MTHFSP49914 203 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
NCL-209ENST00000484328 FNBP4Q8N3X1 1017 aaPredicted RBP8.7□□□□□ -1.02
NCL-209ENST00000484328 PKD1L3Q7Z443 1732 aa8.7□□□□□ -1.02
NCL-209ENST00000484328 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 PLEKHG5O94827 1062 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 CHRNA2Q15822 529 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 ATRNO75882 1429 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 CRB1P82279 1406 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
NCL-209ENST00000484328 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
NCL-209ENST00000484328 HSP90AB2PQ58FF8 381 aa8.68□□□□□ -1.02
NCL-209ENST00000484328 WDR17Q8IZU2 1322 aa8.68□□□□□ -1.02
NCL-209ENST00000484328 KDRP35968 1356 aa8.68□□□□□ -1.02
NCL-209ENST00000484328 PLEKHG2Q9H7P9 1386 aa8.68□□□□□ -1.02
NCL-209ENST00000484328 DISP2A7MBM2 1401 aa8.67□□□□□ -1.02
NCL-209ENST00000484328 AMPHP49418 695 aa8.67□□□□□ -1.02
NCL-209ENST00000484328 IGSF1Q8N6C5 1336 aa8.67□□□□□ -1.02
NCL-209ENST00000484328 BTG4Q9NY30 223 aa8.67□□□□□ -1.02
NCL-209ENST00000484328 AFF2P51816 1311 aa8.66□□□□□ -1.02
NCL-209ENST00000484328 IL13P35225 146 aa8.66□□□□□ -1.02
NCL-209ENST00000484328 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
NCL-209ENST00000484328 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
NCL-209ENST00000484328 C8orf37Q96NL8 207 aa8.66□□□□□ -1.02
NCL-209ENST00000484328 CCER2I3L3R5 266 aa8.65□□□□□ -1.02
NCL-209ENST00000484328 PPM1GO15355 546 aaPredicted RBP8.65□□□□□ -1.02
NCL-209ENST00000484328 VPS72Q15906 364 aa8.65□□□□□ -1.02
NCL-209ENST00000484328 MEX3CQ5U5Q3 659 aaKnown RBP8.65□□□□□ -1.02
NCL-209ENST00000484328 UNC5CLQ8IV45 518 aa8.65□□□□□ -1.02
NCL-209ENST00000484328 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
NCL-209ENST00000484328 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
NCL-209ENST00000484328 MEGF6O75095 1541 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 SPATA31A1Q5TZJ5 1347 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 SPATA31A5Q5VU36 1347 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 SPATA31A7Q8IWB4 1347 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
NCL-209ENST00000484328 CCDC184Q52MB2 194 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
NCL-209ENST00000484328 MIER1Q8N108 512 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 USP21Q9UK80 565 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 ADAMTS7Q9UKP4 1686 aa8.64□□□□□ -1.03
NCL-209ENST00000484328 OVOS2A0A0G2JMS6 1433 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 NBPF6Q5VWK0 638 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 POTEHQ6S545 545 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 NBPF4Q96M43 638 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 EYA1Q99502 592 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
NCL-209ENST00000484328 VIRMAQ69YN4 1812 aaKnown RBP8.62□□□□□ -1.03
NCL-209ENST00000484328 BRWD3Q6RI45 1802 aa8.62□□□□□ -1.03
NCL-209ENST00000484328 ZNF772Q68DY9 489 aaPredicted RBP8.62□□□□□ -1.03
NCL-209ENST00000484328 RGS17Q9UGC6 210 aaPredicted RBP8.62□□□□□ -1.03
NCL-209ENST00000484328 TRPC5Q9UL62 973 aaPredicted RBP8.62□□□□□ -1.03
NCL-209ENST00000484328 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
NCL-209ENST00000484328 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
NCL-209ENST00000484328 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
NCL-209ENST00000484328 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
NCL-209ENST00000484328 PNISRQ8TF01 805 aaKnown RBP8.61□□□□□ -1.03
NCL-209ENST00000484328 LTV1Q96GA3 475 aaPredicted RBP8.61□□□□□ -1.03
NCL-209ENST00000484328 MRS2Q9HD23 443 aa8.61□□□□□ -1.03
NCL-209ENST00000484328 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
NCL-209ENST00000484328 TOGARAM1Q9Y4F4 1720 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 EVA1CP58658 441 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 MAPK8IP2Q13387 824 aaPredicted RBP8.6□□□□□ -1.03
NCL-209ENST00000484328 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
NCL-209ENST00000484328 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 RGS12O14924 1447 aa8.6□□□□□ -1.03
NCL-209ENST00000484328 SIPA1L3O60292 1781 aaPredicted RBP8.59□□□□□ -1.03
NCL-209ENST00000484328 SCN11AQ9UI33 1791 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms