RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NWD2Q9ULI1 1742 aa24.21■■□□□ 1.47
CPNE1-224ENST00000483359 STRN4Q9NRL3 753 aa24.21■■□□□ 1.47
CPNE1-224ENST00000483359 FNBP4Q8N3X1 1017 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-224ENST00000483359 POLKQ9UBT6 870 aa24.2■■□□□ 1.46
CPNE1-224ENST00000483359 NRAPQ86VF7 1730 aa24.2■■□□□ 1.46
CPNE1-224ENST00000483359 BCL9LQ86UU0 1499 aa24.2■■□□□ 1.46
CPNE1-224ENST00000483359 PARD3Q8TEW0 1356 aa24.18■■□□□ 1.46
CPNE1-224ENST00000483359 HOXC9P31274 260 aa24.18■■□□□ 1.46
CPNE1-224ENST00000483359 COL5A2P05997 1499 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-224ENST00000483359 FLT4P35916 1363 aa24.17■■□□□ 1.46
CPNE1-224ENST00000483359 ABCC6O95255 1503 aa24.17■■□□□ 1.46
CPNE1-224ENST00000483359 RTL1A6NKG5 1358 aa24.17■■□□□ 1.46
CPNE1-224ENST00000483359 UNC5CLQ8IV45 518 aa24.16■■□□□ 1.46
CPNE1-224ENST00000483359 IP6K1Q92551 441 aa24.16■■□□□ 1.46
CPNE1-224ENST00000483359 LTV1Q96GA3 475 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-224ENST00000483359 EVA1CP58658 441 aa24.16■■□□□ 1.46
CPNE1-224ENST00000483359 HSP90AB2PQ58FF8 381 aa24.16■■□□□ 1.46
CPNE1-224ENST00000483359 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
CPNE1-224ENST00000483359 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-224ENST00000483359 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.46
CPNE1-224ENST00000483359 SMG6Q86US8 1419 aaKnown RBP24.14■■□□□ 1.46
CPNE1-224ENST00000483359 MTHFSP49914 203 aa24.14■■□□□ 1.45
CPNE1-224ENST00000483359 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
CPNE1-224ENST00000483359 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
CPNE1-224ENST00000483359 ZNF772Q68DY9 489 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-224ENST00000483359 CCDC9Q9Y3X0 531 aaKnown RBP24.13■■□□□ 1.45
CPNE1-224ENST00000483359 ERBB3P21860 1342 aa24.12■■□□□ 1.45
CPNE1-224ENST00000483359 LARP1Q6PKG0 1096 aaKnown RBP24.12■■□□□ 1.45
CPNE1-224ENST00000483359 ANKRD24Q8TF21 1146 aa24.12■■□□□ 1.45
CPNE1-224ENST00000483359 PRKRIP1Q9H875 184 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-224ENST00000483359 KIF24Q5T7B8 1368 aa24.12■■□□□ 1.45
CPNE1-224ENST00000483359 CDK12Q9NYV4 1490 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-224ENST00000483359 RALBP1Q15311 655 aa24.11■■□□□ 1.45
CPNE1-224ENST00000483359 USP35Q9P2H5 1018 aa24.11■■□□□ 1.45
CPNE1-224ENST00000483359 INSRP06213 1382 aa24.1■■□□□ 1.45
CPNE1-224ENST00000483359 QTRT2Q9H974 415 aaKnown RBP24.1■■□□□ 1.45
CPNE1-224ENST00000483359 TRPC5Q9UL62 973 aaPredicted RBP24.09■■□□□ 1.45
CPNE1-224ENST00000483359 ATRNO75882 1429 aa24.09■■□□□ 1.45
CPNE1-224ENST00000483359 TOM1L2Q6ZVM7 507 aa24.09■■□□□ 1.45
CPNE1-224ENST00000483359 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.45
CPNE1-224ENST00000483359 ANP32CO43423 234 aa24.07■■□□□ 1.44
CPNE1-224ENST00000483359 POTEAQ6S8J7 498 aa24.07■■□□□ 1.44
CPNE1-224ENST00000483359 RGPD2P0DJD1 1756 aa24.07■■□□□ 1.44
CPNE1-224ENST00000483359 VPS72Q15906 364 aa24.07■■□□□ 1.44
CPNE1-224ENST00000483359 CRB1P82279 1406 aa24.06■■□□□ 1.44
CPNE1-224ENST00000483359 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
CPNE1-224ENST00000483359 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
CPNE1-224ENST00000483359 EIF4A2Q14240 407 aaKnown RBP24.04■■□□□ 1.44
CPNE1-224ENST00000483359 GLI3P10071 1580 aa24.04■■□□□ 1.44
CPNE1-224ENST00000483359 GJD4Q96KN9 370 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-224ENST00000483359 FAM208AQ9UK61 1670 aaKnown RBP24.03■■□□□ 1.44
CPNE1-224ENST00000483359 SPATA31A5Q5VU36 1347 aa24.03■■□□□ 1.44
CPNE1-224ENST00000483359 SPATA31A7Q8IWB4 1347 aa24.03■■□□□ 1.44
CPNE1-224ENST00000483359 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
CPNE1-224ENST00000483359 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
CPNE1-224ENST00000483359 USHBP1Q8N6Y0 703 aa24.02■■□□□ 1.43
CPNE1-224ENST00000483359 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-224ENST00000483359 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
CPNE1-224ENST00000483359 NBPF4Q96M43 638 aa24■■□□□ 1.43
CPNE1-224ENST00000483359 CFAP53Q96M91 514 aa24■■□□□ 1.43
CPNE1-224ENST00000483359 FAM98CQ17RN3 349 aaKnown RBP23.99■■□□□ 1.43
CPNE1-224ENST00000483359 RXRBP28702 533 aa23.98■■□□□ 1.43
CPNE1-224ENST00000483359 CARD10Q9BWT7 1032 aa23.98■■□□□ 1.43
CPNE1-224ENST00000483359 A0A0G2JS52 829 aa23.98■■□□□ 1.43
CPNE1-224ENST00000483359 DIAPH1O60610 1272 aaKnown RBP23.98■■□□□ 1.43
CPNE1-224ENST00000483359 RBM6P78332 1123 aaKnown RBP23.98■■□□□ 1.43
CPNE1-224ENST00000483359 MYT1Q01538 1121 aa23.98■■□□□ 1.43
CPNE1-224ENST00000483359 TCP11L2Q8N4U5 519 aa23.98■■□□□ 1.43
CPNE1-224ENST00000483359 IL13P35225 146 aa23.97■■□□□ 1.43
CPNE1-224ENST00000483359 EYA1Q99502 592 aa23.96■■□□□ 1.43
CPNE1-224ENST00000483359 WNK3Q9BYP7 1800 aa23.94■■□□□ 1.42
CPNE1-224ENST00000483359 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
CPNE1-224ENST00000483359 RGPD1P0DJD0 1748 aa23.94■■□□□ 1.42
CPNE1-224ENST00000483359 IGSF1Q8N6C5 1336 aa23.92■■□□□ 1.42
CPNE1-224ENST00000483359 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
CPNE1-224ENST00000483359 RGS12O14924 1447 aa23.91■■□□□ 1.42
CPNE1-224ENST00000483359 AEBP1Q8IUX7 1158 aa23.91■■□□□ 1.42
CPNE1-224ENST00000483359 CCDC184Q52MB2 194 aa23.91■■□□□ 1.42
CPNE1-224ENST00000483359 MEGF6O75095 1541 aa23.9■■□□□ 1.42
CPNE1-224ENST00000483359 HMOX1P09601 288 aa23.9■■□□□ 1.42
CPNE1-224ENST00000483359 BARGINQ6ZT62 677 aa23.9■■□□□ 1.42
CPNE1-224ENST00000483359 THSD7AQ9UPZ6 1657 aa23.9■■□□□ 1.42
CPNE1-224ENST00000483359 SULT6B1Q6IMI4 303 aa23.89■■□□□ 1.42
CPNE1-224ENST00000483359 IL2RBP14784 551 aa23.89■■□□□ 1.41
CPNE1-224ENST00000483359 SEPT12Q8IYM1 358 aa23.88■■□□□ 1.41
CPNE1-224ENST00000483359 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
CPNE1-224ENST00000483359 DISP2A7MBM2 1401 aa23.88■■□□□ 1.41
CPNE1-224ENST00000483359 NCAPD2Q15021 1401 aa23.88■■□□□ 1.41
CPNE1-224ENST00000483359 LRRC37A3O60309 1634 aa23.87■■□□□ 1.41
CPNE1-224ENST00000483359 RAPGEF4Q8WZA2 1011 aa23.87■■□□□ 1.41
CPNE1-224ENST00000483359 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-224ENST00000483359 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.416e-11■■□□□ 12.7
CPNE1-224ENST00000483359 PARP4Q9UKK3 1724 aaKnown RBP23.86■■□□□ 1.41
CPNE1-224ENST00000483359 MRS2Q9HD23 443 aa23.85■■□□□ 1.41
CPNE1-224ENST00000483359 ONECUT3O60422 494 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-224ENST00000483359 BRWD3Q6RI45 1802 aa23.84■■□□□ 1.41
CPNE1-224ENST00000483359 KDRP35968 1356 aa23.83■■□□□ 1.41
CPNE1-224ENST00000483359 TATP17735 454 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-224ENST00000483359 DDB1Q16531 1140 aa23.82■■□□□ 1.4
CPNE1-224ENST00000483359 MIER1Q8N108 512 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms