RNA–Protein interactions for RNA: ENST00000483168.5

ITGB5-208, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-208ENST00000483168 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
ITGB5-208ENST00000483168 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
ITGB5-208ENST00000483168 RGS12O14924 1447 aa20.61■□□□□ 0.89
ITGB5-208ENST00000483168 GJD4Q96KN9 370 aaPredicted RBP20.6■□□□□ 0.89
ITGB5-208ENST00000483168 FAM208AQ9UK61 1670 aaKnown RBP20.6■□□□□ 0.89
ITGB5-208ENST00000483168 WNK3Q9BYP7 1800 aa20.58■□□□□ 0.89
ITGB5-208ENST00000483168 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
ITGB5-208ENST00000483168 BLMP54132 1417 aaPredicted RBP20.57■□□□□ 0.88
ITGB5-208ENST00000483168 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
ITGB5-208ENST00000483168 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
ITGB5-208ENST00000483168 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
ITGB5-208ENST00000483168 SPATA31A5Q5VU36 1347 aa20.56■□□□□ 0.88
ITGB5-208ENST00000483168 SPATA31A7Q8IWB4 1347 aa20.56■□□□□ 0.88
ITGB5-208ENST00000483168 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
ITGB5-208ENST00000483168 BRWD3Q6RI45 1802 aa20.56■□□□□ 0.88
ITGB5-208ENST00000483168 THSD7AQ9UPZ6 1657 aa20.56■□□□□ 0.88
ITGB5-208ENST00000483168 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
ITGB5-208ENST00000483168 CRB1P82279 1406 aa20.55■□□□□ 0.88
ITGB5-208ENST00000483168 EVA1CP58658 441 aa20.55■□□□□ 0.88
ITGB5-208ENST00000483168 AXIN2Q9Y2T1 843 aa20.55■□□□□ 0.88
ITGB5-208ENST00000483168 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
ITGB5-208ENST00000483168 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
ITGB5-208ENST00000483168 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
ITGB5-208ENST00000483168 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
ITGB5-208ENST00000483168 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
ITGB5-208ENST00000483168 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.88
ITGB5-208ENST00000483168 ERBB3P21860 1342 aa20.52■□□□□ 0.87
ITGB5-208ENST00000483168 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
ITGB5-208ENST00000483168 IP6K1Q92551 441 aa20.51■□□□□ 0.87
ITGB5-208ENST00000483168 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
ITGB5-208ENST00000483168 FLT4P35916 1363 aa20.5■□□□□ 0.87
ITGB5-208ENST00000483168 RGPD2P0DJD1 1756 aa20.5■□□□□ 0.87
ITGB5-208ENST00000483168 FBLN1P23142 703 aa20.5■□□□□ 0.87
ITGB5-208ENST00000483168 RRS1Q15050 365 aaKnown RBP20.5■□□□□ 0.87
ITGB5-208ENST00000483168 ONECUT3O60422 494 aaPredicted RBP20.49■□□□□ 0.87
ITGB5-208ENST00000483168 HOXC9P31274 260 aa20.49■□□□□ 0.87
ITGB5-208ENST00000483168 AMPHP49418 695 aa20.49■□□□□ 0.87
ITGB5-208ENST00000483168 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
ITGB5-208ENST00000483168 THRAP3Q9Y2W1 955 aaKnown RBP20.48■□□□□ 0.87
ITGB5-208ENST00000483168 EP400Q96L91 3159 aa20.47■□□□□ 0.87
ITGB5-208ENST00000483168 CSB-PGBD3P0DP91 1061 aa20.47■□□□□ 0.87
ITGB5-208ENST00000483168 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
ITGB5-208ENST00000483168 BARGINQ6ZT62 677 aa20.47■□□□□ 0.87
ITGB5-208ENST00000483168 TOM1L2Q6ZVM7 507 aa20.47■□□□□ 0.87
ITGB5-208ENST00000483168 TCP11L2Q8N4U5 519 aa20.47■□□□□ 0.87
ITGB5-208ENST00000483168 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
ITGB5-208ENST00000483168 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
ITGB5-208ENST00000483168 INSRP06213 1382 aa20.46■□□□□ 0.87
ITGB5-208ENST00000483168 LRRC37A3O60309 1634 aa20.45■□□□□ 0.87
ITGB5-208ENST00000483168 SEPT12Q8IYM1 358 aa20.45■□□□□ 0.86
ITGB5-208ENST00000483168 CARD10Q9BWT7 1032 aa20.45■□□□□ 0.86
ITGB5-208ENST00000483168 USP35Q9P2H5 1018 aa20.45■□□□□ 0.86
ITGB5-208ENST00000483168 EMILIN1Q9Y6C2 1016 aa20.45■□□□□ 0.86
ITGB5-208ENST00000483168 A0A0G2JS52 829 aa20.43■□□□□ 0.86
ITGB5-208ENST00000483168 SOCS7O14512 581 aa20.43■□□□□ 0.86
ITGB5-208ENST00000483168 TNNT2P45379 298 aaPredicted RBP20.43■□□□□ 0.86
ITGB5-208ENST00000483168 MYT1Q01538 1121 aa20.43■□□□□ 0.86
ITGB5-208ENST00000483168 POLKQ9UBT6 870 aa20.42■□□□□ 0.86
ITGB5-208ENST00000483168 DISP2A7MBM2 1401 aa20.42■□□□□ 0.86
ITGB5-208ENST00000483168 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
ITGB5-208ENST00000483168 NLRP2Q9NX02 1062 aa20.41■□□□□ 0.86
ITGB5-208ENST00000483168 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
ITGB5-208ENST00000483168 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
ITGB5-208ENST00000483168 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
ITGB5-208ENST00000483168 CDCA7Q9BWT1 371 aaPredicted RBP20.39■□□□□ 0.85
ITGB5-208ENST00000483168 KRT27Q7Z3Y8 459 aa20.37■□□□□ 0.85
ITGB5-208ENST00000483168 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
ITGB5-208ENST00000483168 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
ITGB5-208ENST00000483168 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.85
ITGB5-208ENST00000483168 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
ITGB5-208ENST00000483168 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.84
ITGB5-208ENST00000483168 IL2RBP14784 551 aa20.32■□□□□ 0.84
ITGB5-208ENST00000483168 NBPF6Q5VWK0 638 aa20.32■□□□□ 0.84
ITGB5-208ENST00000483168 NBPF4Q96M43 638 aa20.32■□□□□ 0.84
ITGB5-208ENST00000483168 SBF2Q86WG5 1849 aa20.32■□□□□ 0.84
ITGB5-208ENST00000483168 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-208ENST00000483168 DDB1Q16531 1140 aa20.31■□□□□ 0.84
ITGB5-208ENST00000483168 MEGF6O75095 1541 aa20.31■□□□□ 0.84
ITGB5-208ENST00000483168 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
ITGB5-208ENST00000483168 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
ITGB5-208ENST00000483168 PDE3BQ13370 1112 aa20.3■□□□□ 0.84
ITGB5-208ENST00000483168 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
ITGB5-208ENST00000483168 PARD3Q8TEW0 1356 aa20.3■□□□□ 0.84
ITGB5-208ENST00000483168 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
ITGB5-208ENST00000483168 MTHFSP49914 203 aa20.29■□□□□ 0.84
ITGB5-208ENST00000483168 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
ITGB5-208ENST00000483168 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
ITGB5-208ENST00000483168 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
ITGB5-208ENST00000483168 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
ITGB5-208ENST00000483168 KAT6BQ8WYB5 2073 aa20.28■□□□□ 0.84
ITGB5-208ENST00000483168 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.83
ITGB5-208ENST00000483168 EXOC5O00471 708 aa20.26■□□□□ 0.83
ITGB5-208ENST00000483168 EYA1Q99502 592 aa20.26■□□□□ 0.83
ITGB5-208ENST00000483168 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
ITGB5-208ENST00000483168 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
ITGB5-208ENST00000483168 BCL9O00512 1426 aa20.25■□□□□ 0.83
ITGB5-208ENST00000483168 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
ITGB5-208ENST00000483168 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
ITGB5-208ENST00000483168 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
ITGB5-208ENST00000483168 TATP17735 454 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms