RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 FLT4P35916 1363 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 CHRNA2Q15822 529 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
CCM2-215ENST00000482714 EVA1CP58658 441 aa20.68■□□□□ 0.9
CCM2-215ENST00000482714 BTG4Q9NY30 223 aa20.68■□□□□ 0.9
CCM2-215ENST00000482714 AXIN2Q9Y2T1 843 aa20.68■□□□□ 0.9
CCM2-215ENST00000482714 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
CCM2-215ENST00000482714 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
CCM2-215ENST00000482714 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
CCM2-215ENST00000482714 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
CCM2-215ENST00000482714 UNC5CLQ8IV45 518 aa20.67■□□□□ 0.9
CCM2-215ENST00000482714 CFAP53Q96M91 514 aa20.67■□□□□ 0.9
CCM2-215ENST00000482714 COL14A1Q05707 1796 aaKnown RBP20.66■□□□□ 0.9
CCM2-215ENST00000482714 SLIT2O94813 1529 aa20.65■□□□□ 0.9
CCM2-215ENST00000482714 HSP90AB2PQ58FF8 381 aa20.65■□□□□ 0.9
CCM2-215ENST00000482714 SOCS7O14512 581 aa20.64■□□□□ 0.89
CCM2-215ENST00000482714 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
CCM2-215ENST00000482714 USP21Q9UK80 565 aa20.64■□□□□ 0.89
CCM2-215ENST00000482714 COL18A1P39060 1754 aa20.63■□□□□ 0.89
CCM2-215ENST00000482714 CAMTA1Q9Y6Y1 1673 aa20.62■□□□□ 0.89
CCM2-215ENST00000482714 AFF2P51816 1311 aa20.62■□□□□ 0.89
CCM2-215ENST00000482714 POTEAQ6S8J7 498 aa20.62■□□□□ 0.89
CCM2-215ENST00000482714 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
CCM2-215ENST00000482714 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
CCM2-215ENST00000482714 ERBB3P21860 1342 aa20.61■□□□□ 0.89
CCM2-215ENST00000482714 WDR17Q8IZU2 1322 aa20.61■□□□□ 0.89
CCM2-215ENST00000482714 LTN1O94822 1766 aa20.61■□□□□ 0.89
CCM2-215ENST00000482714 TRPC5Q9UL62 973 aaPredicted RBP20.61■□□□□ 0.89
CCM2-215ENST00000482714 LMO7Q8WWI1 1683 aa20.6■□□□□ 0.89
CCM2-215ENST00000482714 BCL9LQ86UU0 1499 aa20.6■□□□□ 0.89
CCM2-215ENST00000482714 DIAPH1O60610 1272 aaKnown RBP20.6■□□□□ 0.89
CCM2-215ENST00000482714 VPS72Q15906 364 aa20.6■□□□□ 0.89
CCM2-215ENST00000482714 NWD2Q9ULI1 1742 aa20.59■□□□□ 0.89
CCM2-215ENST00000482714 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
CCM2-215ENST00000482714 COL5A2P05997 1499 aaPredicted RBP20.59■□□□□ 0.89
CCM2-215ENST00000482714 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
CCM2-215ENST00000482714 IL13P35225 146 aa20.58■□□□□ 0.89
CCM2-215ENST00000482714 CARD10Q9BWT7 1032 aa20.58■□□□□ 0.89
CCM2-215ENST00000482714 STRN4Q9NRL3 753 aa20.58■□□□□ 0.89
CCM2-215ENST00000482714 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
CCM2-215ENST00000482714 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
CCM2-215ENST00000482714 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
CCM2-215ENST00000482714 QTRT2Q9H974 415 aaKnown RBP20.56■□□□□ 0.88
CCM2-215ENST00000482714 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
CCM2-215ENST00000482714 LARP1Q6PKG0 1096 aaKnown RBP20.56■□□□□ 0.88
CCM2-215ENST00000482714 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
CCM2-215ENST00000482714 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
CCM2-215ENST00000482714 CRB1P82279 1406 aa20.54■□□□□ 0.88
CCM2-215ENST00000482714 GJD4Q96KN9 370 aaPredicted RBP20.54■□□□□ 0.88
CCM2-215ENST00000482714 NLRP2Q9NX02 1062 aa20.54■□□□□ 0.88
CCM2-215ENST00000482714 SPATA31A5Q5VU36 1347 aa20.54■□□□□ 0.88
CCM2-215ENST00000482714 SPATA31A7Q8IWB4 1347 aa20.54■□□□□ 0.88
CCM2-215ENST00000482714 EYA1Q99502 592 aa20.53■□□□□ 0.88
CCM2-215ENST00000482714 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
CCM2-215ENST00000482714 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
CCM2-215ENST00000482714 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
CCM2-215ENST00000482714 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
CCM2-215ENST00000482714 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
CCM2-215ENST00000482714 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.52■□□□□ 0.87
CCM2-215ENST00000482714 BARGINQ6ZT62 677 aa20.51■□□□□ 0.87
CCM2-215ENST00000482714 TCP11L2Q8N4U5 519 aa20.51■□□□□ 0.87
CCM2-215ENST00000482714 ATRNO75882 1429 aa20.51■□□□□ 0.87
CCM2-215ENST00000482714 ONECUT3O60422 494 aaPredicted RBP20.5■□□□□ 0.87
CCM2-215ENST00000482714 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
CCM2-215ENST00000482714 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
CCM2-215ENST00000482714 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
CCM2-215ENST00000482714 RGPD5Q99666 1765 aa20.5■□□□□ 0.87
CCM2-215ENST00000482714 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
CCM2-215ENST00000482714 COL3A1P02461 1466 aaPredicted RBP20.49■□□□□ 0.87
CCM2-215ENST00000482714 NRAPQ86VF7 1730 aa20.48■□□□□ 0.87
CCM2-215ENST00000482714 FCHSD2O94868 740 aa20.48■□□□□ 0.87
CCM2-215ENST00000482714 MIER1Q8N108 512 aa20.48■□□□□ 0.87
CCM2-215ENST00000482714 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
CCM2-215ENST00000482714 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
CCM2-215ENST00000482714 FAM208AQ9UK61 1670 aaKnown RBP20.47■□□□□ 0.87
CCM2-215ENST00000482714 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
CCM2-215ENST00000482714 RXRBP28702 533 aa20.47■□□□□ 0.87
CCM2-215ENST00000482714 NCAPD2Q15021 1401 aa20.46■□□□□ 0.87
CCM2-215ENST00000482714 KDRP35968 1356 aa20.46■□□□□ 0.87
CCM2-215ENST00000482714 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
CCM2-215ENST00000482714 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCM2-215ENST00000482714 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
CCM2-215ENST00000482714 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
CCM2-215ENST00000482714 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
CCM2-215ENST00000482714 USP35Q9P2H5 1018 aa20.45■□□□□ 0.86
CCM2-215ENST00000482714 IL2RBP14784 551 aa20.44■□□□□ 0.86
CCM2-215ENST00000482714 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCM2-215ENST00000482714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCM2-215ENST00000482714 TATP17735 454 aaPredicted RBP20.43■□□□□ 0.86
CCM2-215ENST00000482714 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
CCM2-215ENST00000482714 AMOTQ4VCS5 1084 aa20.41■□□□□ 0.86
CCM2-215ENST00000482714 EXOC5O00471 708 aa20.4■□□□□ 0.86
CCM2-215ENST00000482714 FAM98CQ17RN3 349 aaKnown RBP20.4■□□□□ 0.86
CCM2-215ENST00000482714 NEFMP07197 916 aa20.39■□□□□ 0.85
CCM2-215ENST00000482714 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
CCM2-215ENST00000482714 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
CCM2-215ENST00000482714 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
CCM2-215ENST00000482714 HMOX1P09601 288 aa20.38■□□□□ 0.85
CCM2-215ENST00000482714 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms