RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CDK12Q9NYV4 1490 aaPredicted RBP27.99■■■□□ 2.07
VPS16-207ENST00000481812 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
VPS16-207ENST00000481812 INSRP06213 1382 aa27.99■■■□□ 2.07
VPS16-207ENST00000481812 NWD2Q9ULI1 1742 aa27.98■■■□□ 2.07
VPS16-207ENST00000481812 HOXC9P31274 260 aa27.98■■■□□ 2.07
VPS16-207ENST00000481812 RGPD5Q99666 1765 aa27.97■■■□□ 2.07
VPS16-207ENST00000481812 PLCH1Q4KWH8 1693 aa27.97■■■□□ 2.07
VPS16-207ENST00000481812 CHRNA2Q15822 529 aa27.96■■■□□ 2.07
VPS16-207ENST00000481812 SLIT2O94813 1529 aa27.96■■■□□ 2.07
VPS16-207ENST00000481812 MEX3CQ5U5Q3 659 aaKnown RBP27.95■■■□□ 2.06
VPS16-207ENST00000481812 CAMTA1Q9Y6Y1 1673 aa27.94■■■□□ 2.06
VPS16-207ENST00000481812 ZBTB7CA1YPR0 619 aa27.94■■■□□ 2.06
VPS16-207ENST00000481812 FNBP4Q8N3X1 1017 aaPredicted RBP27.94■■■□□ 2.06
VPS16-207ENST00000481812 PPM1GO15355 546 aaPredicted RBP27.93■■■□□ 2.06
VPS16-207ENST00000481812 AXIN2Q9Y2T1 843 aa27.93■■■□□ 2.06
VPS16-207ENST00000481812 NGLY1Q96IV0 654 aa27.92■■■□□ 2.06
VPS16-207ENST00000481812 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
VPS16-207ENST00000481812 C8orf37Q96NL8 207 aa27.91■■■□□ 2.06
VPS16-207ENST00000481812 NRAPQ86VF7 1730 aa27.9■■■□□ 2.06
VPS16-207ENST00000481812 HSP90AB2PQ58FF8 381 aa27.9■■■□□ 2.06
VPS16-207ENST00000481812 BTG4Q9NY30 223 aa27.9■■■□□ 2.06
VPS16-207ENST00000481812 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.06
VPS16-207ENST00000481812 COL5A2P05997 1499 aaPredicted RBP27.89■■■□□ 2.05
VPS16-207ENST00000481812 FAM208AQ9UK61 1670 aaKnown RBP27.88■■■□□ 2.05
VPS16-207ENST00000481812 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
VPS16-207ENST00000481812 ERBB3P21860 1342 aa27.87■■■□□ 2.05
VPS16-207ENST00000481812 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
VPS16-207ENST00000481812 UNC5CLQ8IV45 518 aa27.85■■■□□ 2.05
VPS16-207ENST00000481812 ANKRD24Q8TF21 1146 aa27.85■■■□□ 2.05
VPS16-207ENST00000481812 AFF2P51816 1311 aa27.84■■■□□ 2.05
VPS16-207ENST00000481812 WDR17Q8IZU2 1322 aa27.84■■■□□ 2.05
VPS16-207ENST00000481812 DIAPH1O60610 1272 aaKnown RBP27.83■■■□□ 2.05
VPS16-207ENST00000481812 EVA1CP58658 441 aa27.83■■■□□ 2.05
VPS16-207ENST00000481812 EIF4A2Q14240 407 aaKnown RBP27.83■■■□□ 2.05
VPS16-207ENST00000481812 IL13P35225 146 aa27.82■■■□□ 2.04
VPS16-207ENST00000481812 USP21Q9UK80 565 aa27.82■■■□□ 2.04
VPS16-207ENST00000481812 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
VPS16-207ENST00000481812 MIER1Q8N108 512 aa27.8■■■□□ 2.04
VPS16-207ENST00000481812 RGPD2P0DJD1 1756 aa27.78■■■□□ 2.04
VPS16-207ENST00000481812 RGPD1P0DJD0 1748 aa27.78■■■□□ 2.04
VPS16-207ENST00000481812 CRB1P82279 1406 aa27.78■■■□□ 2.04
VPS16-207ENST00000481812 LTV1Q96GA3 475 aaPredicted RBP27.78■■■□□ 2.04
VPS16-207ENST00000481812 STRN4Q9NRL3 753 aa27.78■■■□□ 2.04
VPS16-207ENST00000481812 NUDCQ9Y266 331 aa27.78■■■□□ 2.04
VPS16-207ENST00000481812 CSB-PGBD3P0DP91 1061 aa27.77■■■□□ 2.04
VPS16-207ENST00000481812 VPS72Q15906 364 aa27.77■■■□□ 2.04
VPS16-207ENST00000481812 ZNF772Q68DY9 489 aaPredicted RBP27.77■■■□□ 2.04
VPS16-207ENST00000481812 LARP1Q6PKG0 1096 aaKnown RBP27.76■■■□□ 2.03
VPS16-207ENST00000481812 CARD10Q9BWT7 1032 aa27.76■■■□□ 2.03
VPS16-207ENST00000481812 NCAPD2Q15021 1401 aa27.75■■■□□ 2.03
VPS16-207ENST00000481812 EYA1Q99502 592 aa27.75■■■□□ 2.03
VPS16-207ENST00000481812 ATRNO75882 1429 aa27.75■■■□□ 2.03
VPS16-207ENST00000481812 IGSF1Q8N6C5 1336 aa27.74■■■□□ 2.03
VPS16-207ENST00000481812 NBPF6Q5VWK0 638 aa27.74■■■□□ 2.03
VPS16-207ENST00000481812 TOM1L2Q6ZVM7 507 aa27.74■■■□□ 2.03
VPS16-207ENST00000481812 NBPF4Q96M43 638 aa27.74■■■□□ 2.03
VPS16-207ENST00000481812 MRS2Q9HD23 443 aa27.74■■■□□ 2.03
VPS16-207ENST00000481812 TRPC5Q9UL62 973 aaPredicted RBP27.74■■■□□ 2.03
VPS16-207ENST00000481812 CCDC184Q52MB2 194 aa27.73■■■□□ 2.03
VPS16-207ENST00000481812 NLRP2Q9NX02 1062 aa27.73■■■□□ 2.03
VPS16-207ENST00000481812 SPATA31A5Q5VU36 1347 aa27.72■■■□□ 2.03
VPS16-207ENST00000481812 SPATA31A7Q8IWB4 1347 aa27.72■■■□□ 2.03
VPS16-207ENST00000481812 SPATA31A1Q5TZJ5 1347 aa27.71■■■□□ 2.03
VPS16-207ENST00000481812 THRAP3Q9Y2W1 955 aaKnown RBP27.71■■■□□ 2.03
VPS16-207ENST00000481812 QTRT2Q9H974 415 aaKnown RBP27.69■■■□□ 2.02
VPS16-207ENST00000481812 KDRP35968 1356 aa27.69■■■□□ 2.02
VPS16-207ENST00000481812 U2SURPO15042 1029 aaKnown RBP27.67■■■□□ 2.02
VPS16-207ENST00000481812 TCP11L2Q8N4U5 519 aa27.67■■■□□ 2.02
VPS16-207ENST00000481812 PNISRQ8TF01 805 aaKnown RBP27.67■■■□□ 2.02
VPS16-207ENST00000481812 PLEKHG2Q9H7P9 1386 aa27.66■■■□□ 2.02
VPS16-207ENST00000481812 GJD4Q96KN9 370 aaPredicted RBP27.66■■■□□ 2.02
VPS16-207ENST00000481812 PHF23Q9BUL5 403 aaPredicted RBP27.66■■■□□ 2.02
VPS16-207ENST00000481812 RGS17Q9UGC6 210 aaPredicted RBP27.66■■■□□ 2.02
VPS16-207ENST00000481812 U2AF1L5P0DN76 240 aaPredicted RBP27.65■■■□□ 2.02
VPS16-207ENST00000481812 U2AF1Q01081 240 aaKnown RBP eCLIP27.65■■■□□ 2.02
VPS16-207ENST00000481812 WDR43Q15061 677 aaKnown RBP eCLIP27.65■■■□□ 2.02
VPS16-207ENST00000481812 BARGINQ6ZT62 677 aa27.65■■■□□ 2.02
VPS16-207ENST00000481812 CCDC9Q9Y3X0 531 aaKnown RBP27.65■■■□□ 2.02
VPS16-207ENST00000481812 WNK3Q9BYP7 1800 aa27.64■■■□□ 2.02
VPS16-207ENST00000481812 FCHSD2O94868 740 aa27.64■■■□□ 2.02
VPS16-207ENST00000481812 GLI3P10071 1580 aa27.64■■■□□ 2.01
VPS16-207ENST00000481812 SULT6B1Q6IMI4 303 aa27.63■■■□□ 2.01
VPS16-207ENST00000481812 USHBP1Q8N6Y0 703 aa27.62■■■□□ 2.01
VPS16-207ENST00000481812 CDCA7Q9BWT1 371 aaPredicted RBP27.62■■■□□ 2.01
VPS16-207ENST00000481812 PNNQ9H307 717 aaKnown RBP27.61■■■□□ 2.01
VPS16-207ENST00000481812 DISP2A7MBM2 1401 aa27.6■■■□□ 2.01
VPS16-207ENST00000481812 RBM6P78332 1123 aaKnown RBP27.6■■■□□ 2.01
VPS16-207ENST00000481812 USP35Q9P2H5 1018 aa27.6■■■□□ 2.01
VPS16-207ENST00000481812 PARP4Q9UKK3 1724 aaKnown RBP27.6■■■□□ 2.01
VPS16-207ENST00000481812 ONECUT3O60422 494 aaPredicted RBP27.59■■■□□ 2.01
VPS16-207ENST00000481812 HMOX1P09601 288 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 IL2RBP14784 551 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 AEBP1Q8IUX7 1158 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 RAPGEF4Q8WZA2 1011 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 RSPH6AQ9H0K4 717 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 ADAMTS8Q9UP79 889 aa27.59■■■□□ 2.01
VPS16-207ENST00000481812 TATP17735 454 aaPredicted RBP27.56■■■□□ 2
VPS16-207ENST00000481812 THSD7AQ9UPZ6 1657 aa27.56■■■□□ 2
VPS16-207ENST00000481812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.55■■■□□ 2
VPS16-207ENST00000481812 OVOS2A0A0G2JMS6 1433 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms