RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 FBLN1P23142 703 aa12.94□□□□□ -0.34
KDM4A-204ENST00000481296 MIER1Q8N108 512 aa12.94□□□□□ -0.34
KDM4A-204ENST00000481296 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
KDM4A-204ENST00000481296 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
KDM4A-204ENST00000481296 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
KDM4A-204ENST00000481296 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
KDM4A-204ENST00000481296 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
KDM4A-204ENST00000481296 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
KDM4A-204ENST00000481296 MTHFSP49914 203 aa12.92□□□□□ -0.34
KDM4A-204ENST00000481296 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
KDM4A-204ENST00000481296 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
KDM4A-204ENST00000481296 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
KDM4A-204ENST00000481296 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
KDM4A-204ENST00000481296 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
KDM4A-204ENST00000481296 AMPHP49418 695 aa12.91□□□□□ -0.34
KDM4A-204ENST00000481296 INSRP06213 1382 aa12.91□□□□□ -0.34
KDM4A-204ENST00000481296 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
KDM4A-204ENST00000481296 CCER2I3L3R5 266 aa12.9□□□□□ -0.34
KDM4A-204ENST00000481296 HOXC9P31274 260 aa12.9□□□□□ -0.34
KDM4A-204ENST00000481296 MRS2Q9HD23 443 aa12.9□□□□□ -0.34
KDM4A-204ENST00000481296 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
KDM4A-204ENST00000481296 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
KDM4A-204ENST00000481296 SLIT2O94813 1529 aa12.88□□□□□ -0.35
KDM4A-204ENST00000481296 IP6K1Q92551 441 aa12.88□□□□□ -0.35
KDM4A-204ENST00000481296 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
KDM4A-204ENST00000481296 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
KDM4A-204ENST00000481296 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
KDM4A-204ENST00000481296 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
KDM4A-204ENST00000481296 ERBB3P21860 1342 aa12.87□□□□□ -0.35
KDM4A-204ENST00000481296 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
KDM4A-204ENST00000481296 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
KDM4A-204ENST00000481296 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
KDM4A-204ENST00000481296 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
KDM4A-204ENST00000481296 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
KDM4A-204ENST00000481296 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
KDM4A-204ENST00000481296 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
KDM4A-204ENST00000481296 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
KDM4A-204ENST00000481296 C8orf37Q96NL8 207 aa12.84□□□□□ -0.35
KDM4A-204ENST00000481296 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
KDM4A-204ENST00000481296 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
KDM4A-204ENST00000481296 CRB1P82279 1406 aa12.83□□□□□ -0.36
KDM4A-204ENST00000481296 IL13P35225 146 aa12.83□□□□□ -0.36
KDM4A-204ENST00000481296 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
KDM4A-204ENST00000481296 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
KDM4A-204ENST00000481296 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
KDM4A-204ENST00000481296 WDR17Q8IZU2 1322 aa12.83□□□□□ -0.36
KDM4A-204ENST00000481296 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
KDM4A-204ENST00000481296 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
KDM4A-204ENST00000481296 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
KDM4A-204ENST00000481296 GLI3P10071 1580 aa12.81□□□□□ -0.36
KDM4A-204ENST00000481296 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
KDM4A-204ENST00000481296 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
KDM4A-204ENST00000481296 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
KDM4A-204ENST00000481296 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
KDM4A-204ENST00000481296 AFF2P51816 1311 aa12.8□□□□□ -0.36
KDM4A-204ENST00000481296 KDRP35968 1356 aa12.8□□□□□ -0.36
KDM4A-204ENST00000481296 MEGF6O75095 1541 aa12.79□□□□□ -0.36
KDM4A-204ENST00000481296 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
KDM4A-204ENST00000481296 EVA1CP58658 441 aa12.79□□□□□ -0.36
KDM4A-204ENST00000481296 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
KDM4A-204ENST00000481296 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
KDM4A-204ENST00000481296 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
KDM4A-204ENST00000481296 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
KDM4A-204ENST00000481296 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
KDM4A-204ENST00000481296 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 EYA1Q99502 592 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 ATRNO75882 1429 aa12.78□□□□□ -0.36
KDM4A-204ENST00000481296 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
KDM4A-204ENST00000481296 BRWD3Q6RI45 1802 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 HMOX1P09601 288 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 USP21Q9UK80 565 aa12.77□□□□□ -0.37
KDM4A-204ENST00000481296 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
KDM4A-204ENST00000481296 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
KDM4A-204ENST00000481296 DISP2A7MBM2 1401 aa12.76□□□□□ -0.37
KDM4A-204ENST00000481296 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 CARD10Q9BWT7 1032 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
KDM4A-204ENST00000481296 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 TNS2Q63HR2 1409 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 MAPK8IP3Q9UPT6 1336 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 VPS72Q15906 364 aa12.74□□□□□ -0.37
KDM4A-204ENST00000481296 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
KDM4A-204ENST00000481296 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
KDM4A-204ENST00000481296 FCHSD2O94868 740 aa12.73□□□□□ -0.37
KDM4A-204ENST00000481296 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
KDM4A-204ENST00000481296 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms